Stamatia Giannarou

ORCID

Publication Activity (10 Years)

Years Active: 2006-2024
Publications (10 Years): 54

Top Venues

CoRR

Int. J. Comput. Assist. Radiol. Surg.

Comput. methods Biomech. Biomed. Eng. Imaging Vis.

MICCAI (2)

Imperial College London, UK (PHD)

Education History

Imperial College London, UK

PHD

Publications

João Cartucho, Alistair Weld, Samyakh Tukra, Haozheng Xu, Hiroki Matsuzaki, Taiyo Ishikawa, Minjun Kwon, Yongeun Jang, Kwang-Ju Kim, Gwang Lee, Bizhe Bai, Lueder A. Kahrs, Lars Boecking, Simeon Allmendinger, Leopold Müller, Yitong Zhang, Yueming Jin, Sophia Bano, Francisco Vasconcelos, Wolfgang Reiter, Jonas Hajek, Bruno Silva, Estevão Lima, João L. Vilaça, Sandro F. Queiros, Stamatia Giannarou
SurgT challenge: Benchmark of soft-tissue trackers for robotic surgery. Medical Image Anal. 91 (2024)
Jianzhong You, Serine Ajlouni, Irini Kakaletri, Patra Charalampaki, Stamatia Giannarou
XRelevanceCAM: towards explainable tissue characterization with improved localisation of pathological structures in probe-based confocal laser endomicroscopy. Int. J. Comput. Assist. Radiol. Surg. 19 (6) (2024)
Chi Xu, Alfie Roddan, Haozheng Xu, Stamatia Giannarou
FF-ViT: probe orientation regression for robot-assisted endomicroscopy tissue scanning. Int. J. Comput. Assist. Radiol. Surg. 19 (6) (2024)
Baoru Huang, Yicheng Hu, Anh Nguyen, Stamatia Giannarou, Daniel S. Elson
Detecting the Sensing Area of A Laparoscopic Probe in Minimally Invasive Cancer Surgery. CoRR (2023)
João Cartucho, Alistair Weld, Samyakh Tukra, Haozheng Xu, Hiroki Matsuzaki, Taiyo Ishikawa, Minjun Kwon, Yongeun Jang, Kwang-Ju Kim, Gwang Lee, Bizhe Bai, Lueder Kahrs, Lars Boecking, Simeon Allmendinger, Leopold Müller, Yitong Zhang, Yueming Jin, Sophia Bano, Francisco Vasconcelos, Wolfgang Reiter, Jonas Hajek, Bruno Silva, Lukas R. Buschle, Estevão Lima, João L. Vilaça, Sandro F. Queiros, Stamatia Giannarou
SurgT: Soft-Tissue Tracking for Robotic Surgery, Benchmark and Challenge. CoRR (2023)
Baoru Huang, Yicheng Hu, Anh Nguyen, Stamatia Giannarou, Daniel S. Elson
Detecting the Sensing Area of a Laparoscopic Probe in Minimally Invasive Cancer Surgery. MICCAI (9) (2023)
Alistair Weld, João Cartucho, Chi Xu, Joseph Davids, Stamatia Giannarou
Regularising disparity estimation via multi task learning with structured light reconstruction. Comput. methods Biomech. Biomed. Eng. Imaging Vis. 11 (4) (2023)
Haozheng Xu, Mark Runciman, João Cartucho, Chi Xu, Stamatia Giannarou
Graph-based Pose Estimation of Texture-less Surgical Tools for Autonomous Robot Control. ICRA (2023)
Alistair Weld, Luke Dixon, Giulio Anichini, Michael Dyck, Alex Ranne, Sophie Camp, Stamatia Giannarou
Identifying Visible Tissue in Intraoperative Ultrasound Images during Brain Surgery: A Method and Application. CoRR (2023)
Alistair Weld, Michael Dyck, Julian Klodmann, Giulio Anichini, Luke Dixon, Sophie Camp, Alin Albu-Schäffer, Stamatia Giannarou
Collaborative Robotic Ultrasound Tissue Scanning for Surgical Resection Guidance in Neurosurgery. CoRR (2023)
Alistair Weld, João Cartucho, Chi Xu, Joseph Davids, Stamatia Giannarou
Regularizing disparity estimation via multi task learning with structured light reconstruction. CoRR (2023)
Alfie Roddan, Chi Xu, Serine Ajlouni, Irini Kakaletri, Patra Charalampaki, Stamatia Giannarou
Explainable Image Classification with Improved Trustworthiness for Tissue Characterisation. MICCAI (2) (2023)
Michael Dyck, Alistair Weld, Julian Klodmann, Alexander Kirst, Luke Dixon, Giulio Anichini, Sophie Camp, Alin Albu-Schäffer, Stamatia Giannarou
Towards Safe and Collaborative Robotic Ultrasound Tissue Scanning in Neurosurgery. CoRR (2023)
Frank P.-W. Lo, Jianing Qiu, Zeyu Wang, Junhong Chen, Bo Xiao, Wu Yuan, Stamatia Giannarou, Gary Frost, Benny Lo
Dietary Assessment with Multimodal ChatGPT: A Systematic Analysis. CoRR (2023)
Michael Dyck, Alistair Weld, Julian Klodmann, Alexander Kirst, Giulio Anichini, Luke Dixon, Sophie Camp, Stamatia Giannarou, Alin Albu-Schäffer
Automated robotic intraoperative ultrasound for brain surgery. CoRR (2023)
Lena Maier-Hein, Matthias Eisenmann, Duygu Sarikaya, Keno März, Toby Collins, Anand Malpani, Johannes Fallert, Hubertus Feussner, Stamatia Giannarou, Pietro Mascagni, Hirenkumar Nakawala, Adrian Park, Carla M. Pugh, Danail Stoyanov, S. Swaroop Vedula, Kevin Cleary, Gabor Fichtinger, Germain Forestier, Bernard Gibaud, Teodor P. Grantcharov, Makoto Hashizume, Doreen Heckmann-Nötzel, Hannes Götz Kenngott, Ron Kikinis, Lars Mündermann, Nassir Navab, Sinan Onogur, Tobias Roß, Raphael Sznitman, Russell H. Taylor, Minu Dietlinde Tizabi, Martin Wagner, Gregory D. Hager, Thomas Neumuth, Nicolas Padoy, Justin Collins, Ines Gockel, Jan Goedeke, Daniel A. Hashimoto, Luc Joyeux, Kyle Lam, Daniel Richard Leff, Amin Madani, Hani J. Marcus, Ozanan R. Meireles, Alexander Seitel, Dogu Teber, Frank Ückert, Beat P. Müller-Stich, Pierre Jannin, Stefanie Speidel
Surgical data science - from concepts toward clinical translation. Medical Image Anal. 76 (2022)
Baoru Huang, Jian-Qing Zheng, Anh Nguyen, Chi Xu, Ioannis Gkouzionis, Kunal Vyas, David Tuch, Stamatia Giannarou, Daniel S. Elson
Self-supervised Depth Estimation in Laparoscopic Image Using 3D Geometric Consistency. MICCAI (8) (2022)
Samyakh Tukra, Hani J. Marcus, Stamatia Giannarou
See-Through Vision With Unsupervised Scene Occlusion Reconstruction. IEEE Trans. Pattern Anal. Mach. Intell. 44 (7) (2022)
Zejian Cui, João Cartucho, Stamatia Giannarou, Ferdinando Rodriguez y Baena
Caveats on the first-generation da Vinci Research Kit: latent technical constraints and essential calibrations. CoRR (2022)
Baoru Huang, Jian-Qing Zheng, Anh Nguyen, Chi Xu, Ioannis Gkouzionis, Kunal Vyas, David Tuch, Stamatia Giannarou, Daniel S. Elson
Self-Supervised Depth Estimation in Laparoscopic Image using 3D Geometric Consistency. CoRR (2022)
Samyakh Tukra, Stamatia Giannarou
Randomly connected neural networks for self-supervised monocular depth estimation. Comput. methods Biomech. Biomed. Eng. Imaging Vis. 10 (4) (2022)
Samyakh Tukra, Stamatia Giannarou
Stereo Depth Estimation via Self-supervised Contrastive Representation Learning. MICCAI (8) (2022)
Baoru Huang, Jian-Qing Zheng, Stamatia Giannarou, Daniel S. Elson
H-Net: Unsupervised Attention-based Stereo Depth Estimation Leveraging Epipolar Geometry. CVPR Workshops (2022)
Chi Xu, Alfie Roddan, Joseph Davids, Alistair Weld, Haozheng Xu, Stamatia Giannarou
Deep Regression with Spatial-Frequency Feature Coupling and Image Synthesis for Robot-Assisted Endomicroscopy. MICCAI (8) (2022)
Chiyu Wang, João Cartucho, Daniel S. Elson, Ara Darzi, Stamatia Giannarou
Towards Autonomous Control of Surgical Instruments using Adaptive-Fusion Tracking and Robot Self-Calibration. IROS (2022)
Alistair Weld, Arjun Agrawal, Stamatia Giannarou
Ultrasound Segmentation Using a 2D UNet with Bayesian Volumetric Support. CuRIOUS/KiPA/MELA@MICCAI (2022)
João Cartucho, Chiyu Wang, Baoru Huang, Daniel S. Elson, Ara Darzi, Stamatia Giannarou
An enhanced marker pattern that achieves improved accuracy in surgical tool tracking. Comput. methods Biomech. Biomed. Eng. Imaging Vis. 10 (4) (2022)
Baoru Huang, Jianqing Zheng, Anh Nguyen, David Tuch, Kunal Vyas, Stamatia Giannarou, Daniel S. Elson
Self-Supervised Generative Adversarial Network for Depth Estimation in Laparoscopic Images. CoRR (2021)
Pierre Berthet-Rayne, S. M. Hadi Sadati, Georgios Petrou, Neel Patel, Stamatia Giannarou, Daniel Richard Leff, Christos Bergeles
MAMMOBOT: A Miniature Steerable Soft Growing Robot for Early Breast Cancer Detection. IEEE Robotics Autom. Lett. 6 (3) (2021)
Baoru Huang, Jian-Qing Zheng, Stamatia Giannarou, Daniel S. Elson
H-Net: Unsupervised Attention-based Stereo Depth Estimation Leveraging Epipolar Geometry. CoRR (2021)
João Cartucho, Samyakh Tukra, Yunpeng Li, Daniel S. Elson, Stamatia Giannarou
VisionBlender: a tool to efficiently generate computer vision datasets for robotic surgery. Comput. methods Biomech. Biomed. Eng. Imaging Vis. 9 (4) (2021)
Baoru Huang, Jian-Qing Zheng, Anh Nguyen, David Tuch, Kunal Vyas, Stamatia Giannarou, Daniel S. Elson
Self-supervised Generative Adversarial Network for Depth Estimation in Laparoscopic Images. MICCAI (4) (2021)
Stamatia Giannarou, Ilker Hacihaliloglu
IJCARS - IPCAI 2020 special issue: 11th conference on information processing for computer-assisted interventions - part 1. Int. J. Comput. Assist. Radiol. Surg. 15 (5) (2020)
Lena Maier-Hein, Matthias Eisenmann, Duygu Sarikaya, Keno März, Toby Collins, Anand Malpani, Johannes Fallert, Hubertus Feussner, Stamatia Giannarou, Pietro Mascagni, Hirenkumar Nakawala, Adrian Park, Carla M. Pugh, Danail Stoyanov, S. Swaroop Vedula, Beat Peter Müller-Stich, Kevin Cleary, Gabor Fichtinger, Germain Forestier, Bernard Gibaud, Teodor P. Grantcharov, Makoto Hashizume, Hannes Kenngott, Ron Kikinis, Lars Mündermann, Nassir Navab, Sinan Onogur, Raphael Sznitman, Russell H. Taylor, Minu Dietlinde Tizabi, Martin Wagner, Gregory D. Hager, Thomas Neumuth, Nicolas Padoy, Pierre Jannin, Stefanie Speidel
Surgical Data Science - from Concepts to Clinical Translation. CoRR (2020)
João Cartucho, David Shapira, Hutan Ashrafian, Stamatia Giannarou
Multimodal mixed reality visualisation for intraoperative surgical guidance. Int. J. Comput. Assist. Radiol. Surg. 15 (5) (2020)
Jian Zhan, João Cartucho, Stamatia Giannarou
Autonomous Tissue Scanning under Free-Form Motion for Intraoperative Tissue Characterisation. CoRR (2020)
Baoru Huang, Ya-Yen Tsai, João Cartucho, Kunal Vyas, David Tuch, Stamatia Giannarou, Daniel S. Elson
Tracking and visualization of the sensing area for a tethered laparoscopic gamma probe. Int. J. Comput. Assist. Radiol. Surg. 15 (8) (2020)
Jian Zhan, João Cartucho, Stamatia Giannarou
Autonomous Tissue Scanning under Free-Form Motion for Intraoperative Tissue Characterisation. ICRA (2020)
Pavlos Triantafyllou, Piyamate Wisanuvej, Stamatia Giannarou, Jindong Liu, Guang-Zhong Yang
A Framework for Sensorless Tissue Motion Tracking in Robotic Endomicroscopy Scanning. ICRA (2018)
Yachun Li, Patra Charalampaki, Yong Liu, Guang-Zhong Yang, Stamatia Giannarou
Context aware decision support in neurosurgical oncology based on an efficient classification of endomicroscopic data. Int. J. Comput. Assist. Radiol. Surg. 13 (8) (2018)
Lena Maier-Hein, Matthias Eisenmann, Carolin Feldmann, Hubertus Feussner, Germain Forestier, Stamatia Giannarou, Bernard Gibaud, Gregory D. Hager, Makoto Hashizume, Darko Katic, Hannes Kenngott, Ron Kikinis, Michael Kranzfelder, Anand Malpani, Keno März, Beat P. Müller-Stich, Nassir Navab, Thomas Neumuth, Nicolas Padoy, Adrian Park, Carla M. Pugh, Nicolai Schoch, Danail Stoyanov, Russell H. Taylor, Martin Wagner, S. Swaroop Vedula, Pierre Jannin, Stefanie Speidel
Surgical Data Science: A Consensus Perspective. CoRR (2018)
Lena Maier-Hein, S. Swaroop Vedula, Stefanie Speidel, Nassir Navab, Ron Kikinis, Adrian Park, Matthias Eisenmann, Hubertus Feussner, Germain Forestier, Stamatia Giannarou, Makoto Hashizume, Darko Katic, Hannes Kenngott, Michael Kranzfelder, Anand Malpani, Keno März, Thomas Neumuth, Nicolas Padoy, Carla M. Pugh, Nicolai Schoch, Danail Stoyanov, Russell H. Taylor, Martin Wagner, Gregory D. Hager, Pierre Jannin
Surgical Data Science: Enabling Next-Generation Surgery. CoRR (2017)
Lin Zhang, Menglong Ye, Stamatia Giannarou, Philip Pratt, Guang-Zhong Yang
Motion-Compensated Autonomous Scanning for Tumour Localisation using Intraoperative Ultrasound. CoRR (2017)
Mali Shen, Stamatia Giannarou, Pallav L. Shah, Guang-Zhong Yang
BRANCH: Bifurcation Recognition for Airway Navigation based on struCtural cHaracteristics. MICCAI (2) (2017)
Lin Zhang, Menglong Ye, Stamatia Giannarou, Philip Pratt, Guang-Zhong Yang
Motion-Compensated Autonomous Scanning for Tumour Localisation Using Intraoperative Ultrasound. MICCAI (2) (2017)
Emmanuel B. Vander Poorten, Phuong Toan Tran, Alain Devreker, Caspar Gruijthuijsen, Sergio Portolés Diez, Gabrijel Smoljkic, Vule Strbac, Nele Famaey, Dominiek Reynaerts, Jos Vander Sloten, Abraham Temesgen Tibebu, Bingbin Yu, Christian Rauch, Felix Bernard, Yohannes Kassahun, Jan Hendrik Metzen, Stamatia Giannarou, Liang Zhao, Su-Lin Lee, Guang-Zhong Yang, Evangelos B. Mazomenos, Ping-Lin Chang, Danail Stoyanov, Maryna Kvasnytsia, Joris Van Deun, Eva Verhoelst, Mauro M. Sette, Anita Di Iasio, Giovanni Leo, Fabian Hertner, Daniel Scherly, Leandro Chelini, Nicolai Häni, Dejan Seatovic, Benoît Rosa, Herbert De Praetere, Paul Herijgers
Cognitive AutonomouS CAtheters Operating in Dynamic Environments. J. Medical Robotics Res. 1 (3) (2016)
Menglong Ye, Stamatia Giannarou, Alexander Meining, Guang-Zhong Yang
Online tracking and retargeting with applications to optical biopsy in gastrointestinal endoscopic examinations. Medical Image Anal. 30 (2016)
Yohannes Kassahun, Bingbin Yu, Abraham Temesgen Tibebu, Danail Stoyanov, Stamatia Giannarou, Jan Hendrik Metzen, Emmanuel B. Vander Poorten
Surgical robotics beyond enhanced dexterity instrumentation: a survey of machine learning techniques and their role in intelligent and autonomous surgical actions. Int. J. Comput. Assist. Radiol. Surg. 11 (4) (2016)
Stamatia Giannarou, Menglong Ye, Gauthier Gras, Konrad Leibrandt, Hani J. Marcus, Guang-Zhong Yang
Vision-based deformation recovery for intraoperative force estimation of tool-tissue interaction for neurosurgery. Int. J. Comput. Assist. Radiol. Surg. 11 (6) (2016)
Menglong Ye, Lin Zhang, Stamatia Giannarou, Guang-Zhong Yang
Real-time 3D Tracking of Articulated Tools for Robotic Surgery. CoRR (2016)
Liang Zhao, Stamatia Giannarou, Su-Lin Lee, Guang-Zhong Yang
Registration-Free Simultaneous Catheter and Environment Modelling. MICCAI (1) (2016)
Liang Zhao, Stamatia Giannarou, Su-Lin Lee, Guang-Zhong Yang
SCEM+: Real-Time Robust Simultaneous Catheter and Environment Modeling for Endovascular Navigation. IEEE Robotics Autom. Lett. 1 (2) (2016)
Yohannes Kassahun, Bingbin Yu, Abraham Temesgen Tibebu, Danail Stoyanov, Stamatia Giannarou, Jan Hendrik Metzen, Emmanuel B. Vander Poorten
Erratum to: Surgical robotics beyond enhanced dexterity instrumentation: a survey of machine learning techniques and their role in intelligent and autonomous surgical actions. Int. J. Comput. Assist. Radiol. Surg. 11 (5) (2016)
Menglong Ye, Lin Zhang, Stamatia Giannarou, Guang-Zhong Yang
Real-Time 3D Tracking of Articulated Tools for Robotic Surgery. MICCAI (1) (2016)
Mali Shen, Stamatia Giannarou, Guang-Zhong Yang
Robust camera localisation with depth reconstruction for bronchoscopic navigation. Int. J. Comput. Assist. Radiol. Surg. 10 (6) (2015)
Menglong Ye, Edward Johns, Stamatia Giannarou, Guang-Zhong Yang
Online Scene Association for Endoscopic Navigation. MICCAI (2) (2014)
Chaoyang Shi, Stamatia Giannarou, Su-Lin Lee, Guang-Zhong Yang
Simultaneous catheter and environment modeling for Trans-catheter Aortic Valve Implantation. IROS (2014)
Alessandro Vandini, Stamatia Giannarou, Su-Lin Lee, Guang-Zhong Yang
3D Robotic Catheter Shape Reconstruction and Localisation Using Appearance Priors and Adaptive C-Arm Positioning. AE-CAI (2013)
Menglong Ye, Stamatia Giannarou, Nisha Patel, Julian Teare, Guang-Zhong Yang
Pathological Site Retargeting under Tissue Deformation Using Geometrical Association and Tracking. MICCAI (2) (2013)
Stamatia Giannarou, Marco Visentini Scarzanella, Guang-Zhong Yang
Probabilistic Tracking of Affine-Invariant Anisotropic Regions. IEEE Trans. Pattern Anal. Mach. Intell. 35 (1) (2013)
Stamatia Giannarou, Zhiqiang Zhang, Guang-Zhong Yang
Deformable structure from motion by fusing visual and inertial measurement data. IROS (2012)
Stamatia Giannarou, Guang-Zhong Yang
Tissue Deformation Recovery with Gaussian Mixture Model Based Structure from Motion. AE-CAI (2011)
Stamatia Giannarou, Tania Stathaki
Optimal edge detection using multiple operators for image understanding. EURASIP J. Adv. Signal Process. 2011 (2011)
Stamatia Giannarou, Guang-Zhong Yang
Content-Based Surgical Workflow Representation Using Probabilistic Motion Modeling. MIAR (2010)
Su-Lin Lee, Mirna Lerotic, Valentina Vitiello, Stamatia Giannarou, Ka-Wai Kwok, Marco Visentini Scarzanella, Guang-Zhong Yang
From medical images to minimally invasive intervention: Computer assistance for robotic surgery. Comput. Medical Imaging Graph. 34 (1) (2010)
Stamatia Giannarou, Marco Visentini Scarzanella, Guang-Zhong Yang
Affine-Invariant Anisotropic Detector for Soft Tissue Tracking in Minimally Invasive Surgery. ISBI (2009)
Selen Atasoy, Ben Glocker, Stamatia Giannarou, Diana Mateus, Alexander Meining, Guang-Zhong Yang, Nassir Navab
Probabilistic Region Matching in Narrow-Band Endoscopy for Targeted Optical Biopsy. MICCAI (1) (2009)
Peter Mountney, Stamatia Giannarou, Daniel S. Elson, Guang-Zhong Yang
Optical Biopsy Mapping for Minimally Invasive Cancer Screening. MICCAI (1) (2009)
Athanassios N. Skodras, Stamatia Giannarou, Mark Fenwick, Stephen Franks, Jaroslav Stark, Kate Hardy
Object recognition in the ovary: Quantification of oocytes from microscopic images. DPS (2009)
Stamatia Giannarou, Tania Stathaki
Shape Signature Matching for Object Identification Invariant to Image Transformations and Occlusion. CAIP (2007)
Stamatia Giannarou, Tania Stathaki
Object Identification in Complex Scenes using Shape Context Descriptors and Multi-Stage Clustering. DSP (2007)
Stamatia Giannarou, Tania Stathaki
Novel Statistical Approaches to the Quantitative Combination of Multiple Edge Detectors. ICIAR (1) (2006)

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Publication Activity (10 Years)

Top Topics

Top Venues

Stamatia Giannarou