Toby Collins

Publication Activity (10 Years)

Years Active: 2010-2024
Publications (10 Years): 36

Top Topics

Semantic Segmentation

Information Processing

Augmented Reality

Top Venues

Int. J. Comput. Assist. Radiol. Surg.

IEEE Trans. Pattern Anal. Mach. Intell.

Publications

Toby Collins, Sara Moccia, Mathias Unberath
IJCARS: IPCAI 2024 special issue - 15th international conference on information processing in computer-assisted interventions 2024 - part 1. Int. J. Comput. Assist. Radiol. Surg. 19 (6) (2024)
Loic Themyr, Clément Rambour, Nicolas Thome, Toby Collins, Alexandre Hostettler
Full Contextual Attention for Multi-resolution Transformers in Semantic Segmentation. WACV (2023)
Toby Collins, Qi Dou, Mathias Unberath
IJCARS-IPCAI 2023 special issue: conference information processing for computer-assisted interventions, 14th International Conference 2023 - part 1. Int. J. Comput. Assist. Radiol. Surg. 18 (6) (2023)
William Ndzimbong, Cyril Fourniol, Loic Themyr, Nicolas Thome, Yvonne Keeza, Beniot Sauer, Pierre-Thierry Piechaud, Arnaud Mejean, Jacques Marescaux, Daniel George, Didier Mutter, Alexandre Hostettler, Toby Collins
TRUSTED: The Paired 3D Transabdominal Ultrasound and CT Human Data for Kidney Segmentation and Registration Research. CoRR (2023)
Jean-Paul Mazellier, Cindy Rolland, Emilie Wernert, Julieta Montanelli, Alexandre Hostettler, Lee Swanstrom, Benoit Gallix, Leonardo Sosa Valencia, Toby Collins, Nicolas Padoy
Electromagnetic tracking of endoscopic ultrasound probe for pancreas examination: accuracy assessment under realistic medical conditions. Comput. methods Biomech. Biomed. Eng. Imaging Vis. 11 (4) (2023)
Lena Maier-Hein, Matthias Eisenmann, Duygu Sarikaya, Keno März, Toby Collins, Anand Malpani, Johannes Fallert, Hubertus Feussner, Stamatia Giannarou, Pietro Mascagni, Hirenkumar Nakawala, Adrian Park, Carla M. Pugh, Danail Stoyanov, S. Swaroop Vedula, Kevin Cleary, Gabor Fichtinger, Germain Forestier, Bernard Gibaud, Teodor P. Grantcharov, Makoto Hashizume, Doreen Heckmann-Nötzel, Hannes Götz Kenngott, Ron Kikinis, Lars Mündermann, Nassir Navab, Sinan Onogur, Tobias Roß, Raphael Sznitman, Russell H. Taylor, Minu Dietlinde Tizabi, Martin Wagner, Gregory D. Hager, Thomas Neumuth, Nicolas Padoy, Justin Collins, Ines Gockel, Jan Goedeke, Daniel A. Hashimoto, Luc Joyeux, Kyle Lam, Daniel Richard Leff, Amin Madani, Hani J. Marcus, Ozanan R. Meireles, Alexander Seitel, Dogu Teber, Frank Ückert, Beat P. Müller-Stich, Pierre Jannin, Stefanie Speidel
Surgical data science - from concepts toward clinical translation. Medical Image Anal. 76 (2022)
Loic Themyr, Clément Rambour, Nicolas Thome, Toby Collins, Alexandre Hostettler
Memory Transformers for Full Context and High-Resolution 3D Medical Segmentation. MLMI@MICCAI (2022)
Loic Themyr, Clément Rambour, Nicolas Thome, Toby Collins, Alexandre Hostettler
Full Contextual Attention for Multi-resolution Transformers in Semantic Segmentation. CoRR (2022)
Loic Themyr, Clément Rambour, Nicolas Thome, Toby Collins, Alexandre Hostettler
Memory transformers for full context and high-resolution 3D Medical Segmentation. CoRR (2022)
Francesco Bardozzo, Toby Collins, Antonello Forgione, Alexandre Hostettler, Roberto Tagliaferri
StaSiS-Net: A stacked and siamese disparity estimation network for depth reconstruction in modern 3D laparoscopy. Medical Image Anal. 77 (2022)
Francesco Bardozzo, Mattia delli Priscoli, Toby Collins, Antonello Forgione, Alexandre Hostettler, Roberto Tagliaferri
Cross X-AI: Explainable Semantic Segmentation of Laparoscopic Images in Relation to Depth Estimation. IJCNN (2022)
Guinther Saibro, Michele Diana, Benoît Sauer, Jacques Marescaux, Alexandre Hostettler, Toby Collins
Automatic Detection of Steatosis in Ultrasound Images with Comparative Visual Labeling. MICCAI (3) (2022)
David Fuentes-Jiménez, Daniel Pizarro, David Casillas-Pérez, Toby Collins, Adrien Bartoli
Deep Shape-from-Template: Single-image quasi-isometric deformable registration and reconstruction. Image Vis. Comput. 127 (2022)
David Fuentes-Jiménez, Daniel Pizarro, David Casillas-Perez, Toby Collins, Adrien Bartoli
Texture-Generic Deep Shape-From-Template. IEEE Access 9 (2021)
Martina De Landro, Eric Felli, Toby Collins, Richard Nkusi, Andrea Baiocchini, Manuel Barberio, Annalisa Orrico, Margherita Pizzicannella, Alexandre Hostettler, Michele Diana, Paola Saccomandi
Prediction of In Vivo Laser-Induced Thermal Damage with Hyperspectral Imaging Using Deep Learning. Sensors 21 (20) (2021)
Toby Collins, Daniel Pizarro, Simone Gasparini, Nicolas Bourdel, Pauline Chauvet, Michel Canis, Lilian Calvet, Adrien Bartoli
Augmented Reality Guided Laparoscopic Surgery of the Uterus. IEEE Trans. Medical Imaging 40 (1) (2021)
Olivier Petit, Nicolas Thome, Clement Rambour, Loic Themyr, Toby Collins, Luc Soler
U-Net Transformer: Self and Cross Attention for Medical Image Segmentation. MLMI@MICCAI (2021)
Richard Modrzejewski, Toby Collins, Alexandre Hostettler, Jacques Marescaux, Adrien Bartoli
Light modelling and calibration in laparoscopy. Int. J. Comput. Assist. Radiol. Surg. 15 (5) (2020)
Valentin Bencteux, Guinther Saibro, Eran Shlomovitz, Pietro Mascagni, Silvana Perretta, Alexandre Hostettler, Jacques Marescaux, Toby Collins
Automatic task recognition in a flexible endoscopy benchtop trainer with semi-supervised learning. Int. J. Comput. Assist. Radiol. Surg. 15 (9) (2020)
Mathias Gallardo, Daniel Pizarro, Toby Collins, Adrien Bartoli
Shape-From-Template with Curves. Int. J. Comput. Vis. 128 (1) (2020)
Lena Maier-Hein, Matthias Eisenmann, Duygu Sarikaya, Keno März, Toby Collins, Anand Malpani, Johannes Fallert, Hubertus Feussner, Stamatia Giannarou, Pietro Mascagni, Hirenkumar Nakawala, Adrian Park, Carla M. Pugh, Danail Stoyanov, S. Swaroop Vedula, Beat Peter Müller-Stich, Kevin Cleary, Gabor Fichtinger, Germain Forestier, Bernard Gibaud, Teodor P. Grantcharov, Makoto Hashizume, Hannes Kenngott, Ron Kikinis, Lars Mündermann, Nassir Navab, Sinan Onogur, Raphael Sznitman, Russell H. Taylor, Minu Dietlinde Tizabi, Martin Wagner, Gregory D. Hager, Thomas Neumuth, Nicolas Padoy, Pierre Jannin, Stefanie Speidel
Surgical Data Science - from Concepts to Clinical Translation. CoRR (2020)
Richard Modrzejewski, Toby Collins, Barbara Seeliger, Adrien Bartoli, Alexandre Hostettler, Jacques Marescaux
An in vivo porcine dataset and evaluation methodology to measure soft-body laparoscopic liver registration accuracy with an extended algorithm that handles collisions. Int. J. Comput. Assist. Radiol. Surg. 14 (7) (2019)
Nader Mahmoud, Toby Collins, Alexandre Hostettler, Luc Soler, Christophe Doignon, José María Martínez Montiel
Live Tracking and Dense Reconstruction for Handheld Monocular Endoscopy. IEEE Trans. Medical Imaging 38 (1) (2019)
Richard Modrzejewski, Toby Collins, Adrien Bartoli, Alexandre Hostettler, Jacques Marescaux
Soft-Body Registration of Pre-operative 3D Models to Intra-operative RGBD Partial Body Scans. MICCAI (4) (2018)
David Fuentes-Jiménez, David Casillas-Pérez, Daniel Pizarro-Pérez, Toby Collins, Adrien Bartoli
Deep Shape-from-Template: Wide-Baseline, Dense and Fast Registration and Deformable Reconstruction from a Single Image. CoRR (2018)
Adrien Bartoli, Toby Collins
Plane-Based Resection for Metric Affine Cameras. J. Math. Imaging Vis. 60 (7) (2018)
Ajad Chhatkuli, Daniel Pizarro, Toby Collins, Adrien Bartoli
Inextensible Non-Rigid Structure-from-Motion by Second-Order Cone Programming. IEEE Trans. Pattern Anal. Mach. Intell. 40 (10) (2018)
Ajad Chhatkuli, Daniel Pizarro, Adrien Bartoli, Toby Collins
A Stable Analytical Framework for Isometric Shape-from-Template by Surface Integration. IEEE Trans. Pattern Anal. Mach. Intell. 39 (5) (2017)
Toby Collins, Adrien Bartoli
Planar Structure-from-Motion with Affine Camera Models: Closed-Form Solutions, Ambiguities and Degeneracy Analysis. IEEE Trans. Pattern Anal. Mach. Intell. 39 (6) (2017)
Nader Mahmoud, Alexandre Hostettler, Toby Collins, Luc Soler, Christophe Doignon, J. M. M. Montiel
SLAM based Quasi Dense Reconstruction For Minimally Invasive Surgery Scenes. CoRR (2017)
Mathias Gallardo, Toby Collins, Adrien Bartoli
Dense Non-rigid Structure-from-Motion and Shading with Unknown Albedos. ICCV (2017)
Toby Collins, Adrien Bartoli, Nicolas Bourdel, Michel Canis
Robust, Real-Time, Dense and Deformable 3D Organ Tracking in Laparoscopic Videos. MICCAI (1) (2016)
Mathias Gallardo, Toby Collins, Adrien Bartoli
Using Shading and a 3D Template to Reconstruct Complex Surface Deformations. BMVC (2016)
Toby Collins, Pauline Chauvet, Clément Debize, Daniel Pizarro, Adrien Bartoli, Michel Canis, Nicolas Bourdel
A System for Augmented Reality Guided Laparoscopic Tumour Resection with Quantitative Ex-vivo User Evaluation. CARE@MICCAI (2016)
Mathias Gallardo, Toby Collins, Adrien Bartoli
Can We Jointly Register and Reconstruct Creased Surfaces by Shape-from-Template Accurately? ECCV (4) (2016)
Ajad Chhatkuli, Daniel Pizarro, Toby Collins, Adrien Bartoli
Inextensible Non-Rigid Shape-from-Motion by Second-Order Cone Programming. CVPR (2016)
Adrien Bartoli, Yan Gérard, François Chadebecq, Toby Collins, Daniel Pizarro
Shape-from-Template. IEEE Trans. Pattern Anal. Mach. Intell. 37 (10) (2015)
Adrien Bartoli, Toby Collins, Daniel Pizarro
Metric corrections of the affine camera. Comput. Vis. Image Underst. 135 (2015)
Shaifali Parashar, Daniel Pizarro, Adrien Bartoli, Toby Collins
As-Rigid-as-Possible Volumetric Shape-from-Template. ICCV (2015)
Kristina Prokopetc, Toby Collins, Adrien Bartoli
Automatic Detection of the Uterus and Fallopian Tube Junctions in Laparoscopic Images. IPMI (2015)
Toby Collins, Adrien Bartoli, Nicolas Bourdel, Michel Canis
Segmenting the Uterus in Monocular Laparoscopic Images without Manual Input. MICCAI (3) (2015)
Mathias Gallardo, Daniel Pizarro, Adrien Bartoli, Toby Collins
Shape-from-Template in Flatland. CVPR (2015)
Toby Collins, Adrien Bartoli
Realtime Shape-from-Template: System and Applications. ISMAR (2015)
Toby Collins, Adrien Bartoli
Using Isometry to Classify Correct/Incorrect 3D-2D Correspondences. ECCV (4) (2014)
Ajad Chhatkuli, Adrien Bartoli, Abed Malti, Toby Collins
Live image parsing in uterine laparoscopy. ISBI (2014)
Toby Collins, Adrien Bartoli
Infinitesimal Plane-Based Pose Estimation. Int. J. Comput. Vis. 109 (3) (2014)
Toby Collins, Pablo Mesejo, Adrien Bartoli
An Analysis of Errors in Graph-Based Keypoint Matching and Proposed Solutions. ECCV (7) (2014)
Toby Collins, Daniel Pizarro, Adrien Bartoli, Michel Canis, Nicolas Bourdel
Computer-Assisted Laparoscopic myomectomy by augmenting the uterus with pre-operative MRI data. ISMAR (2014)
Daniel Pizarro, Adrien Bartoli, Toby Collins
Isowarp and Conwarp: Warps that Exactly Comply with Weak-Perspective Projection of Deforming Objects. BMVC (2013)
Adrien Bartoli, Toby Collins
Template-Based Isometric Deformable 3D Reconstruction with Sampling-Based Focal Length Self-Calibration. CVPR (2013)
Adrien Bartoli, Daniel Pizarro, Toby Collins
A Robust Analytical Solution to Isometric Shape-from-Template with Focal Length Calibration. ICCV (2013)
Toby Collins, Daniel Pizarro, Adrien Bartoli, Michel Canis, Nicolas Bourdel
Realtime Wide-Baseline Registration of the Uterus in Laparoscopic Videos Using Multiple Texture Maps. AE-CAI (2013)
Toby Collins, Adrien Bartoli
3D Reconstruction in Laparoscopy with Close-Range Photometric Stereo. MICCAI (2) (2012)
Jae-Hak Kim, Adrien Bartoli, Toby Collins, Richard I. Hartley
Tracking by Detection for Interactive Image Augmentation in Laparoscopy. WBIR (2012)
Adrien Bartoli, Yan Gérard, François Chadebecq, Toby Collins
On template-based reconstruction from a single view: Analytical solutions and proofs of well-posedness for developable, isometric and conformal surfaces. CVPR (2012)
Abed Malti, Adrien Bartoli, Toby Collins
Template-Based Conformal Shape-from-Motion-and-Shading for Laparoscopy. IPCAI (2012)
Toby Collins, Adrien Bartoli
Towards Live Monocular 3D Laparoscopy Using Shading and Specularity Information. IPCAI (2012)
Abed Malti, Adrien Bartoli, Toby Collins
Template-Based Conformal Shape-from-Motion from Registered Laparoscopic Images. MIUA (2011)
Toby Collins, Benoît Compte, Adrien Bartoli
Deformable Shape-From-Motion in Laparoscopy using a Rigid Sliding Window. MIUA (2011)
Abed Malti, Adrien Bartoli, Toby Collins
A pixel-based approach to template-based monocular 3D reconstruction of deformable surfaces. ICCV Workshops (2011)
Toby Collins, Adrien Bartoli
Locally Planar and Affine Deformable Surface Reconstruction from Video. VMV (2010)