Poul M. F. Nielsen

Publication Activity (10 Years)

Years Active: 1989-2023
Publications (10 Years): 38

Top Topics

Image Registration

Top Venues

IEEE Trans. Biomed. Eng.

J. Integr. Bioinform.

Publications

Michael S. F. Hoffman, James W. McKeage, Bryan P. Ruddy, Poul M. F. Nielsen, Andrew J. Taberner
Measurement of Blood Dilution during Lancet-Free Blood Sampling. EMBC (2023)
Hayden Randles, Alistair Newcombe, Andrew J. Taberner, David Budgett, Poul M. F. Nielsen
Optimising Multi-Wavelength Attenuation-Based Length Sensors. I2MTC (2023)
Matthew G. French, Gonzalo D. Maso Talou, Thiranja P. Babarenda Gamage, Martyn P. Nash, Poul M. F. Nielsen, Anthony J. Doyle, Juan Eugenio Iglesias, Yaël Balbastre, Sean I. Young
Diffeomorphic Multi-Resolution Deep Learning Registration for Applications in Breast MRI. CoRR (2023)
Alistair Newcombe, Hayden Randles, Andrew J. Taberner, David Budgett, Poul M. F. Nielsen
Development of an Optical Pressure Sensing Array: Initial Validation. I2MTC (2023)
Alexander W. Dixon, Samuel P. Richardson, Hiroo Suami, Thiranja P. Babarenda Gamage, Poul M. F. Nielsen, Hayley M. Reynolds
Toward Development of a Portable System for 3D Fluorescence Lymphography. EMBC (2023)
Michael Clerx, Michael T. Cooling, Jonathan Cooper, Alan Garny, Keri R. Moyle, David P. Nickerson, Poul M. F. Nielsen, Hugh Sorby
CellML 2.0.1. J. Integr. Bioinform. 20 (1) (2023)
Michael S. F. Hoffman, James W. Mckeage, Bryan P. Ruddy, Poul M. F. Nielsen, Andrew J. Taberner
Lancet-free blood sampling and collection for the management of diabetes. BSN (2023)
Emily J. Lam Po Tang, Toan Pham, Jordyn Chan, Kenneth Tran, June-Chiew Han, Khoon Lim, Poul M. F. Nielsen, Andrew J. Taberner
An Instrument for High-throughput Testing of Heart Tissue In Vitro. EMBC (2023)
Saeed Mollaee, David Budgett, Andrew J. Taberner, Poul M. F. Nielsen
High Density Surface Profiling of Multi-layer Soft Actuator Arrays for Use in Prosthetic Sockets. ICBEA (2023)
Jiali Xu, James W. Mckeage, Bryan P. Ruddy, Poul M. F. Nielsen, Andrew J. Taberner
Jet-Induced Tissue Disruption for Blood Release. IEEE Trans. Biomed. Eng. 69 (6) (2022)
Sachira Kuruppu, Leo K. Cheng, Poul M. F. Nielsen, Thiranja P. Babarenda Gamage, Recep Avci, Timothy R. Angeli, Niranchan Paskaranandavadivel
High-Resolution Spatiotemporal Quantification of Intestinal Motility With Free-Form Deformation. IEEE Trans. Biomed. Eng. 69 (6) (2022)
Amir HajiRassouliha, Samuel P. Richardson, Andrew J. Taberner, Martyn P. Nash, Poul M. F. Nielsen
The effect of camera settings on image noise and accuracy of subpixel image registration. Mach. Vis. Appl. 32 (4) (2021)
Mojtaba Shahmohammadi, Anany Dwivedi, Poul M. F. Nielsen, Andrew J. Taberner, Minas V. Liarokapis
On Lightmyography: A New Muscle Machine Interfacing Method for Decoding Human Intention and Motion. EMBC (2021)
Jiali Xu, James W. Mckeage, Bryan P. Ruddy, Poul M. F. Nielsen, Andrew J. Taberner
. EMBC (2020)
Michael Clerx, Michael T. Cooling, Jonathan Cooper, Alan Garny, Keri R. Moyle, David P. Nickerson, Poul M. F. Nielsen, Hugh Sorby
CellML 2.0. J. Integr. Bioinform. 17 (2-3) (2020)
Stephen A. Creamer, Emily J. Lam Po Tang, Poul M. F. Nielsen, Andrew J. Taberner
A miniature mechanical testing device for testing hydrogel-based biomaterials in a confocal microscope. EMBC (2020)
Steffi Knorn, Damiano Varagnolo, Nathalie Kask, David M. Budgett, Jennifer A. Kruger, Poul M. F. Nielsen
Analysing the effects of biofeedback using control-oriented formalisms: the case of gamified Kegel exercising. ECC (2020)
Rhys M. J. Williams, James W. Mckeage, Bryan P. Ruddy, Poul M. F. Nielsen, Andrew J. Taberner
Viscous Heating Assists Jet Formation During Needle-Free Jet Injection of Viscous Drugs. IEEE Trans. Biomed. Eng. 66 (12) (2019)
Debbie Zhao, Amir HajiRassouliha, Emily Lam Po Tang, Martyn P. Nash, Poul M. F. Nielsen, Andrew J. Taberner
A camera-based system for highly accurate 3D displacement field measurement and contactless force sensing. I2MTC (2019)
Andrew J. Taberner, Poul M. F. Nielsen, Callum M. Johnston, Alexander J. Anderson, Ming L. Cheuk, Amy S. Garrett, Jarrah Dowrick, Emily Lam Po Tang, Amir HajiRassouliha, Bryan P. Ruddy, Toan Pham, Kenneth Tran, June-Chiew Han, Denis S. Loiselle
A dynamometer for nature's engines. IEEE Instrum. Meas. Mag. 22 (2) (2019)
Emily J. Lam Po Tang, Robin C. Laven, Amir HajiRassouliha, Poul M. F. Nielsen, Andrew J. Taberner
Measurement of Displacement in Isolated Heart Muscle Cells using Markerless Subpixel Image Registration. I2MTC (2019)
Marco T. Y. Schneider, Ju Zhang, Joseph J. Crisco, Arnold-Peter C. Weiss, Amy L. Ladd, Poul M. F. Nielsen, Thor F. Besier
Automatic segmentation of the thumb trapeziometacarpal joint using parametric statistical shape modelling and random forest regression voting. Comput. methods Biomech. Biomed. Eng. Imaging Vis. 7 (3) (2019)
Nathalie Kask, David M. Budgett, Jennifer A. Kruger, Poul M. F. Nielsen, Damiano Varagnolo, Steffi Knorn
Data-driven modelling of fatigue in pelvic floor muscles when performing Kegel exercises. CDC (2019)
Alistair Newcombe, Hayden Randles, David Budgett, Andrew J. Taberner, Poul M. F. Nielsen
A Deformation Sensor based upon Light Attenuation in a Silicone Waveguide: Construction and Characterisation. I2MTC (2019)
Laura Pedofsky, David Budgett, Poul M. F. Nielsen, Jackie Smallridge, Lynsey Hayward, Jennifer A. Kruger
The Use of an Intra-Vaginal Pressure Sensor Device To Evaluate Changes in Intra-Vaginal Pressure Profiles Pre and Post Pelvic Organ Prolapse Surgery. I2MTC (2019)
Amir HajiRassouliha, Emily J. Lam Po Tang, Andrew J. Taberner, Martyn P. Nash, Poul M. F. Nielsen
A Method for Three-Dimensional Measurements Using Widely Angled Stereoscopic Cameras. I2MTC (2019)
James W. Mckeage, Nandoun Abeysekera, Bryan P. Ruddy, Poul M. F. Nielsen, Andrew J. Taberner
Laterally Dispersing Nozzles for Needle-assisted Jet Injection. EMBC (2019)
Andrew J. Taberner, Callum M. Johnston, Toan Pham, June-Chiew Han, Riaz Uddin, Denis S. Loiselle, Bryan P. Ruddy, Poul M. F. Nielsen
A Flowthrough Infusion Calorimeter for Measuring Muscle Energetics: Design and Performance. IEEE Trans. Instrum. Meas. 67 (7) (2018)
Amir HajiRassouliha, Andrew J. Taberner, Martyn P. Nash, Poul M. F. Nielsen
Suitability of recent hardware accelerators (DSPs, FPGAs, and GPUs) for computer vision and image processing algorithms. Signal Process. Image Commun. 68 (2018)
Amir HajiRassouliha, Andrew J. Taberner, Martyn P. Nash, Poul M. F. Nielsen
Subpixel phase-based image registration using Savitzky-Golay differentiators in gradient-correlation. Comput. Vis. Image Underst. 170 (2018)
James W. Mckeage, Kieran A. Brennan, Geehoon Park, N. Catherine Hogan, Ian W. Hunter, Bryan P. Ruddy, Poul M. F. Nielsen, Andrew J. Taberner
High-speed X-ray analysis of liquid delivery during jet injection. EMBC (2017)
Ming L. Cheuk, Alexander J. Anderson, June-Chiew Han, Norman Lippok, Frederique Vanholsbeeck, Bryan P. Ruddy, Denis S. Loiselle, Poul M. F. Nielsen, Andrew J. Taberner
Four-Dimensional Imaging of Cardiac Trabeculae Contracting In Vitro Using Gated OCT. IEEE Trans. Biomed. Eng. 64 (1) (2017)
Callum M. Johnston, Poul M. F. Nielsen, Andrew J. Taberner, Ian W. Hunter
Vapor pressure thermometry at room temperature. I2MTC (2017)
Ming L. Cheuk, Callum M. Johnston, June-Chiew Han, Denis S. Loiselle, Poul M. F. Nielsen, Andrew J. Taberner
Cardiac muscle energetics: Improved normalisation of heat using optical coherence tomography. EMBC (2016)
Rhys Matthew James Williams, Bryan P. Ruddy, N. Catherine Hogan, Ian W. Hunter, Poul M. F. Nielsen, Andrew J. Taberner
Analysis of Moving-Coil Actuator Jet Injectors for Viscous Fluids. IEEE Trans. Biomed. Eng. 63 (6) (2016)
James W. Mckeage, Bryan P. Ruddy, Poul M. F. Nielsen, Andrew J. Taberner
A device for controlled jet injection of large volumes of liquid. EMBC (2016)
Kieran A. Brennan, Bryan P. Ruddy, Poul M. F. Nielsen, Andrew J. Taberner
Light source depth estimation in porcine skin using spatially resolved diffuse imaging. EMBC (2016)
Amir HajiRassouliha, Andrew J. Taberner, Martyn P. Nash, Poul M. F. Nielsen
Motion Correction Using Subpixel Image Registration. RAMBO+HVSMR@MICCAI (2016)
Bryan P. Ruddy, James W. Mckeage, Rhys M. J. Williams, Poul M. F. Nielsen, Andrew J. Taberner
A compound ampoule for large-volume controllable jet injection. EMBC (2015)
Amir HajiRassouliha, Barbara Kmiecik, Andrew J. Taberner, Martyn P. Nash, Poul M. F. Nielsen
A Low-cost, hand-held stereoscopic device for measuring dynamic deformations of skin in vivo. IVCNZ (2015)
Autumn A. Cuellar, Warren Hedley, Melanie Nelson, Catherine M. Lloyd, Matt D. B. Halstead, David P. Bullivant, David P. Nickerson, Peter J. Hunter, Poul M. F. Nielsen
The CellML 1.1 Specification. J. Integr. Bioinform. 12 (2) (2015)
Andrew J. Taberner, Callum M. Johnston, Toan Pham, June-Chiew Han, Bryan P. Ruddy, Denis S. Loiselle, Poul M. F. Nielsen
Measuring the mechanical efficiency of a working cardiac muscle sample at body temperature using a flow-through calorimeter. EMBC (2015)
James W. Mckeage, Rhys M. J. Williams, Bryan P. Ruddy, Poul M. F. Nielsen, Andrew J. Taberner
Sensorless position control of voice-coil motors for needle-free jet injection. ICARA (2015)
Matthew D. Parker, Thiranja P. Babarenda Gamage, Amir HajiRassouliha, Andrew J. Taberner, Martyn P. Nash, Poul M. F. Nielsen
Surface deformation tracking and modeling of soft materials. EMBC (2015)
Ju Zhang, Hugh Sorby, John Clement, C. David L. Thomas, Peter J. Hunter, Poul M. F. Nielsen, David G. Lloyd, Mark Taylor, Thor F. Besier
The MAP Client: User-Friendly Musculoskeletal Modelling Workflows. ISBMS (2014)
Ming L. Cheuk, Norman Lippok, Alexander W. Dixon, Bryan P. Ruddy, Frederique Vanholsbeeck, Poul M. F. Nielsen, Andrew J. Taberner
Optical coherence tomography imaging of cardiac trabeculae. EMBC (2014)
Ju Zhang, Duane Malcolm, Jacqui Hislop-Jambrich, C. David L. Thomas, Poul M. F. Nielsen
An anatomical region-based statistical shape model of the human femur. Comput. methods Biomech. Biomed. Eng. Imaging Vis. 2 (3) (2014)
Amir HajiRassouliha, Thiranja P. Babarenda Gamage, Matthew D. Parker, Martyn P. Nash, Andrew J. Taberner, Poul M. F. Nielsen
FPGA implementation of 2D cross-correlation for real-time 3D tracking of deformable surfaces. IVCNZ (2013)
Amir HajiRassouliha, Thiranja P. Babarenda Gamage, Matthew D. Parker, Martyn P. Nash, Andrew J. Taberner, Poul M. F. Nielsen
3D surface profiling using arbitrarily positioned cameras. IVCNZ (2013)
Randall Britten, G. Richard Christie, Caton Little, Andrew K. Miller, Chris P. Bradley, Alan Wu, Tommy Yu, Peter J. Hunter, Poul M. F. Nielsen
FieldML, a proposed open standard for the Physiome project for mathematical model representation. Medical Biol. Eng. Comput. 51 (11) (2013)
Angela W. C. Lee, Vijayaraghavan Rajagopal, Thiranja P. Babarenda Gamage, Anthony J. Doyle, Poul M. F. Nielsen, Martyn P. Nash
Breast lesion co-localisation between X-ray and MR images using finite element modelling. Medical Image Anal. 17 (8) (2013)
David P. Nickerson, Alan Garny, Poul M. F. Nielsen, Peter J. Hunter
Standards and tools supporting collaborative development of the virtual physiological human. EMBC (2013)
Matthew D. Parker, Mihailo Azhar, Thiranja P. Babarenda Gamage, Darren Alvares, Andrew J. Taberner, Poul M. F. Nielsen
Surface deformation tracking of a silicone gel skin phantom in response to normal indentation. EMBC (2012)
Ju Zhang, Duane Malcolm, Jacqui Hislop-Jambrich, C. David L. Thomas, Poul M. F. Nielsen
Automatic Meshing of Femur Cortical Surfaces from Clinical CT Images. MeshMed (2012)
Rhys M. J. Williams, N. Catherine Hogan, Poul M. F. Nielsen, Ian W. Hunter, Andrew J. Taberner
A computational model of a controllable needle-free jet injector. EMBC (2012)
Bingchen Liu, Alexander Bock, Timo Ropinski, Martyn P. Nash, Poul M. F. Nielsen, Burkhard Wünsche
GPU-accelerated direct volume rendering of finite element data sets. IVCNZ (2012)
Alexander J. Anderson, Poul M. F. Nielsen, Andrew J. Taberner
An investigation into the viability of image processing for the measurement of sarcomere length in isolated cardiac trabeculae. EMBC (2012)
Andrew J. Taberner, June-Chiew Han, Denis S. Loiselle, Poul M. F. Nielsen
A work-loop calorimeter for measuring the force-length-heat relationship of working excised cardiac muscle fibers. EMBC (2011)
Matthew D. Parker, Andrew J. Taberner, Poul M. F. Nielsen
A thermal stereoscope for surface reconstruction of the diabetic foot. EMBC (2011)
Dagmar Waltemath, Richard R. Adams, Daniel A. Beard, Frank T. Bergmann, Upinder S. Bhalla, Randall Britten, Vijayalakshmi Chelliah, Mike T. Cooling, Jonathan Cooper, Edmund J. Crampin, Alan Garny, Stefan Hoops, Michael Hucka, Peter J. Hunter, Edda Klipp, Camille Laibe, Andrew K. Miller, Ion I. Moraru, David P. Nickerson, Poul M. F. Nielsen, Macha Nikolski, Sven Sahle, Herbert M. Sauro, Henning Schmidt, Jacky L. Snoep, Dominic P. Tolle, Olaf Wolkenhauer, Nicolas Le Novère
Minimum Information About a Simulation Experiment (MIASE). PLoS Comput. Biol. 7 (4) (2011)
Thomas O. Lintern, Mark C. Finch, Andrew J. Taberner, Poul M. F. Nielsen, Martyn P. Nash
Comparison of system identification techniques in the analysis of a phantom for studying shaken-baby syndrome. EMBC (2011)
Callum M. Johnston, Poul M. F. Nielsen, Ian W. Hunter, Andrew J. Taberner
A vapor pressure thermometer for use in muscle microcalorimetry. EMBC (2011)
Tommy Yu, Catherine M. Lloyd, David P. Nickerson, Mike T. Cooling, Andrew K. Miller, Alan Garny, Jonna R. Terkildsen, James R. Lawson, Randall Britten, Peter J. Hunter, Poul M. F. Nielsen
The Physiome Model Repository 2. Bioinform. 27 (5) (2011)
Andrew K. Miller, Tommy Yu, Randall Britten, Mike T. Cooling, James R. Lawson, Dougal Cowan, Alan Garny, Matt D. B. Halstead, Peter J. Hunter, David P. Nickerson, Geoff Nunns, Sarala M. Wimalaratne, Poul M. F. Nielsen
Revision history aware repositories of computational models of biological systems. BMC Bioinform. 12 (2011)
Andrew K. Miller, Justin Marsh, Adam Reeve, Alan Garny, Randall Britten, Matt D. B. Halstead, Jonathan Cooper, David P. Nickerson, Poul M. F. Nielsen
An overview of the CellML API and its implementation. BMC Bioinform. 11 (2010)
Angela W. C. Lee, Julia A. Schnabel, Vijay Rajagopal, Poul M. F. Nielsen, Martyn P. Nash
Breast Image Registration by Combining Finite Elements and Free-Form Deformations. Digital Mammography / IWDM (2010)
Sarala M. Wimalaratne, Matt D. B. Halstead, Catherine M. Lloyd, Edmund J. Crampin, Poul M. F. Nielsen
Biophysical annotation and representation of CellML models. Bioinform. 25 (17) (2009)
Sarala M. Wimalaratne, Matt D. B. Halstead, Catherine M. Lloyd, Mike T. Cooling, Edmund J. Crampin, Poul M. F. Nielsen
A method for visualizing CellML models. Bioinform. 25 (22) (2009)
Vijay Rajagopal, Martyn P. Nash, Ralph Highnam, Poul M. F. Nielsen
The Breast Biomechanics Reference State for Multi-modal Image Analysis. Digital Mammography / IWDM (2008)
Catherine M. Lloyd, James R. Lawson, Peter J. Hunter, Poul M. F. Nielsen
The CellML Model Repository. Bioinform. 24 (18) (2008)
Xinshan Li, Jennifer A. Kruger, Jae-Hoon Chung, Martyn P. Nash, Poul M. F. Nielsen
Modelling Childbirth: Comparing Athlete and Non-athlete Pelvic Floor Mechanics. MICCAI (2) (2008)
Jae-Hoon Chung, Vijay Rajagopal, Poul M. F. Nielsen, Martyn P. Nash
Modelling Mammographic Compression of the Breast. MICCAI (2) (2008)
Peter J. Hunter, Edmund J. Crampin, Poul M. F. Nielsen
Bioinformatics, multiscale modeling and the IUPS Physiome Project. Briefings Bioinform. 9 (4) (2008)
Angela W. C. Lee, Vijay Rajagopal, Jae-Hoon Chung, Peter Bier, Poul M. F. Nielsen, Martyn P. Nash
Biomechanical modelling for breast image registration. Medical Imaging: Image-Guided Procedures (2008)
Vijay Rajagopal, Angela W. C. Lee, Jae-Hoon Chung, Ruth Warren, Ralph Highnam, Poul M. F. Nielsen, Martyn P. Nash
Towards Tracking Breast Cancer Across Medical Images Using Subject-Specific Biomechanical Models. MICCAI (1) (2007)
Vijay Rajagopal, Jae-Hoon Chung, Poul M. F. Nielsen, Martyn P. Nash
Finite Element Modelling of Breast Biomechanics: Directly Calculating the Reference State. EMBC (2006)
David P. Nickerson, Carey Stevens, Matt D. B. Halstead, Peter J. Hunter, Poul M. F. Nielsen
Toward a Curated CellML Model Repository. EMBC (2006)
David P. Nickerson, Martyn P. Nash, Poul M. F. Nielsen, Nicolas Smith, Peter J. Hunter
Computational multiscale modeling in the IUPS Physiome Project: Modeling cardiac electromechanics. IBM J. Res. Dev. 50 (6) (2006)
Pras Pathmanathan, David Gavaghan, Jonathan P. Whiteley, Michael Brady, Martyn P. Nash, Poul M. F. Nielsen, Vijay Rajagopal
Predicting Tumour Location by Simulating Large Deformations of the Breast Using a 3D Finite Element Model and Nonlinear Elasticity. MICCAI (2) (2004)
Autumn A. Cuellar, Catherine M. Lloyd, Poul M. F. Nielsen, David P. Bullivant, David P. Nickerson, Peter J. Hunter
An Overview of CellML 1.1, a Biological Model Description Language. Simul. 79 (12) (2003)
Michael Hucka, Andrew Finney, Herbert M. Sauro, H. Bolouri, John C. Doyle, Hiroaki Kitano, Adam P. Arkin, Benjamin J. Bornstein, D. Bray, Athel Cornish-Bowden, Autumn A. Cuellar, Serge Dronov, Ernst Dieter Gilles, Martin Ginkel, Victoria Gor, Igor Goryanin, W. J. Hedley, T. Charles Hodgman, Jan-Hendrik S. Hofmeyr, Peter J. Hunter, Nick S. Juty, J. L. Kasberger, Andreas Kremling, Ursula Kummer, Nicolas Le Novère, Leslie M. Loew, D. Lucio, Pedro Mendes, E. Minch, Eric Mjolsness, Yoichi Nakayama, M. R. Nelson, Poul M. F. Nielsen, T. Sakurada, James C. Schaff, Bruce E. Shapiro, Thomas Simon Shimizu, Hugh D. Spence, Jörg Stelling, Koichi Takahashi, Masaru Tomita, J. Wagner, J. Wang
The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models. Bioinform. 19 (4) (2003)
Ian W. Hunter, Serge R. Lafontaine, Poul M. F. Nielsen, Peter J. Hunter, John M. Hollerbach
Manipulation and dynamic mechanical testing of microscopic objects using a tele-micro-robot system. ICRA (1989)