Andrew Finney

Publication Activity (10 Years)

Years Active: 2002-2020
Publications (10 Years): 2

Top Topics

Biochemical Networks

Systems Biology

Markup Language

Hierarchical Model

Top Venues

J. Integr. Bioinform.

Publications

Fengkai Zhang, Lucian P. Smith, Michael L. Blinov, James R. Faeder, William S. Hlavacek, José Juan Tapia, Sarah M. Keating, Nicolas Rodriguez, Andreas Dräger, Leonard A. Harris, Andrew Finney, Bin Hu, Michael Hucka, Martin Meier-Schellersheim
Systems biology markup language (SBML) level 3 package: multistate, multicomponent and multicompartment species, version 1, release 2. J. Integr. Bioinform. 17 (2-3) (2020)
Lucian Paul Smith, Michael Hucka, Stefan Hoops, Andrew Finney, Martin Ginkel, Chris J. Myers, Ion I. Moraru, Wolfram Liebermeister
SBML Level 3 package: Hierarchical Model Composition, Version 1 Release 3. J. Integr. Bioinform. 12 (2) (2015)
Sarah M. Keating, Benjamin J. Bornstein, Andrew Finney, Michael Hucka
SBMLToolbox: an SBML toolbox for MATLAB users. Bioinform. 22 (10) (2006)
Rainer Machné, Andrew Finney, Stefan Müller, James Lu, Stefanie Widder, Christoph Flamm
The SBML ODE Solver Library: a native API for symbolic and fast numerical analysis of reaction networks. Bioinform. 22 (11) (2006)
Maria J. Schilstra, Lu Li, Joanne Matthews, Andrew Finney, Michael Hucka, Nicolas Le Novère
CellML2SBML: conversion of CellML into SBML. Bioinform. 22 (8) (2006)
Andrew Finney
Developing SBML Beyond Level 2: Proposals for Development. CMSB (2004)
Bruce E. Shapiro, Michael Hucka, Andrew Finney, John Doyle
MathSBML: a package for manipulating SBML-based biological models. Bioinform. 20 (16) (2004)
Michael Hucka, Andrew Finney, Herbert M. Sauro, H. Bolouri, John C. Doyle, Hiroaki Kitano, Adam P. Arkin, Benjamin J. Bornstein, D. Bray, Athel Cornish-Bowden, Autumn A. Cuellar, Serge Dronov, Ernst Dieter Gilles, Martin Ginkel, Victoria Gor, Igor Goryanin, W. J. Hedley, T. Charles Hodgman, Jan-Hendrik S. Hofmeyr, Peter J. Hunter, Nick S. Juty, J. L. Kasberger, Andreas Kremling, Ursula Kummer, Nicolas Le Novère, Leslie M. Loew, D. Lucio, Pedro Mendes, E. Minch, Eric Mjolsness, Yoichi Nakayama, M. R. Nelson, Poul M. F. Nielsen, T. Sakurada, James C. Schaff, Bruce E. Shapiro, Thomas Simon Shimizu, Hugh D. Spence, Jörg Stelling, Koichi Takahashi, Masaru Tomita, J. Wagner, J. Wang
The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models. Bioinform. 19 (4) (2003)
Michael Hucka, Andrew Finney, Herbert M. Sauro, H. Bolouri, John C. Doyle, Hiroaki Kitano
The ERATO Systems Biology Workbench: Enabling Interaction and Exchange Between Software Tools for Computational Biology. Pacific Symposium on Biocomputing (2002)