Recep Avci

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 42

Top Topics

Fractal Geometry

Supervised Machine Learning

Confocal Microscopy

Source Localization

Top Venues

IEEE Trans. Biomed. Eng.

Comput. Biol. Medicine

IEEE J. Biomed. Health Informatics

Publications

Nipuni D. Nagahawatte, Recep Avci, Timothy R. Angeli-Gordon, Niranchan Paskaranandavadivel, Leo K. Cheng
High-Energy Pacing in the Jejunum Elicits Pulsatile Segmental Contractions. IEEE Trans. Biomed. Eng. 71 (3) (2024)
Savindi Wijenayaka, Alys R. Clark, Recep Avci, Leo K. Cheng, Peng Du
Atrous spatial pyramid pooling and multi-image data fusion for smooth muscle segmentation in upper gastrointestinal sphincters. EMBC (2023)
Saeed Hosseini, Nadun Palmada, Recep Avci, Vinod Suresh, Leo K. Cheng
MRI Derived Simulations of Flow Patterns in the Stomach. EMBC (2023)
Nipuni D. Nagahawatte, Niranchan Paskaranandavadivel, Laura R. Bear, Recep Avci, Leo K. Cheng
A novel framework for the removal of pacing artifacts from bio-electrical recordings. Comput. Biol. Medicine 155 (2023)
Chad E. Drake, Leo K. Cheng, Nicole D. Muszynski, Suseela Somarajan, Niranchan Paskaranandavadivel, Timothy R. Angeli-Gordon, Peng Du, Leonard A. Bradshaw, Recep Avci
Electroanatomical mapping of the stomach with simultaneous biomagnetic measurements. Comput. Biol. Medicine 165 (2023)
Xiaokai Wang, Jiayue Cao, Kuan Han, Minkyu Choi, Yushi She, Ulrich M. Scheven, Recep Avci, Peng Du, Leo K. Cheng, Madeleine R. Di Natale, John B. Furness, Zhongming Liu
Diffeomorphic Surface Modeling for MRI-Based Characterization of Gastric Anatomy and Motility. IEEE Trans. Biomed. Eng. 70 (7) (2023)
Chad E. Drake, Leo K. Cheng, Niranchan Paskaranandavadivel, Saeed Alighaleh, Timothy R. Angeli-Gordon, Peng Du, Leonard A. Bradshaw, Recep Avci
Stomach Geometry Reconstruction Using Serosal Transmitting Coils and Magnetic Source Localization. IEEE Trans. Biomed. Eng. 70 (3) (2023)
Nipuni D. Nagahawatte, Recep Avci, Niranchan Paskaranandavadivel, Leo K. Cheng
Evaluation of Pacing Parameters to Induce Contractions in the Small Intestine. EMBC (2023)
Omkar N. Athavale, Leo K. Cheng, Recep Avci, Alys R. Clark, Peng Du
Cervical Vagus Nerve Stimulation Disrupts Gastric Slow Wave Activity in Rats. EMBC (2023)
Nipuni D. Nagahawatte, Leo K. Cheng, Recep Avci, Laura R. Bear, Niranchan Paskaranandavadivel
A generalized framework for pacing artifact removal using a Hampel filter. EMBC (2022)
Peikai Zhang, Omkar N. Athavale, Ryan A. L. Cowan, Alys R. Clark, Recep Avci, Leo K. Cheng, Jadranka Travas-Sejdic, Peng Du
Wet-printing of PEDOT: PSS Microelectrodes for Gastric Slow Wave Recording. EMBC (2022)
Henry Han, Leo K. Cheng, Recep Avci, Niranchan Paskaranandavadivel
Quantification of Gastric Slow Wave Velocity Using Bipolar High-Resolution Recordings. IEEE Trans. Biomed. Eng. 69 (3) (2022)
Recep Avci, Chad E. Eichler, Niranchan Paskaranandavadivel, Peng Du, Timothy R. Angeli-Gordon, Leonard A. Bradshaw, Leo K. Cheng
Characterizing Spatial Signatures of Gastric Electrical Activity Using Biomagnetic Source Localization. IEEE Trans. Biomed. Eng. 69 (11) (2022)
Timothy R. Angeli-Gordon, Chad E. Eichler, Leo K. Cheng, Niranchan Paskaranandavadivel, Peng Du, Leonard A. Bradshaw, Recep Avci
Anatomically Constrained Gastric Slow Wave Localization using Biomagnetic Data. EMBC (2022)
Sachira Kuruppu, Leo K. Cheng, Poul M. F. Nielsen, Thiranja P. Babarenda Gamage, Recep Avci, Timothy R. Angeli, Niranchan Paskaranandavadivel
High-Resolution Spatiotemporal Quantification of Intestinal Motility With Free-Form Deformation. IEEE Trans. Biomed. Eng. 69 (6) (2022)
Sue Ann Mah, Recep Avci, Peng Du, Jean-Marie Vanderwinden, Leo K. Cheng
Deciphering Stomach Myoelectrical Slow Wave Conduction Patterns via Confocal Imaging of Gastric Pacemaker Cells and Fractal Geometry. EMBC (2022)
Jack Xu, Leo K. Cheng, Recep Avci, Peng Du
Reconstruction of the Gastro-esophageal Junction Based on Ultramill Imaging for Biomechanical Analysis. EMBC (2022)
Omkar N. Athavale, Leo K. Cheng, Alys R. Clark, Recep Avci, Peng Du
Mathematical Modeling of Gastric Slow Waves During Electrical Field Stimulation. EMBC (2022)
Recep Avci, Joseph D. Wickens, Mehrdad Sangi, Omkar N. Athavale, Madeleine R. Di Natale, John B. Furness, Peng Du, Leo K. Cheng
A Computational Model of Biophysical Properties of the Rat Stomach Informed by Comprehensive Analysis of Muscle Anatomy. EMBC (2022)
Matthew Savage, Recep Avci, Zahra Aghababaie, Ashton Matthee, Faraz Chamani, Punit Prakash, Leo K. Cheng, Timothy R. Angeli-Gordon
A computational model of radiofrequency ablation in the stomach, an emerging therapy for gastric dysrhythmias. EMBC (2021)
Chad E. Eichler, Leo K. Cheng, Niranchan Paskaranandavadivel, Saeed Alighaleh, Timothy R. Angeli-Gordon, Peng Du, Leonard A. Bradshaw, Recep Avci
Reconstruction of stomach geometry using magnetic source localization. EMBC (2021)
Chad E. Eichler, Leo K. Cheng, Niranchan Paskaranandavadivel, Peng Du, Leonard A. Bradshaw, Recep Avci
Effects of magnetogastrography sensor configurations in tracking slow wave propagation. Comput. Biol. Medicine 129 (2021)
Sue Ann Mah, Recep Avci, Peng Du, Jean-Marie Vanderwinden, Leo K. Cheng
Antral Variation of Murine Gastric Pacemaker Cells Informed by Confocal Imaging and Machine Learning Methods. EMBC (2021)
Saeed Hosseini, Recep Avci, Niranchan Paskaranandavadivel, Vinod Suresh, Leo K. Cheng
Quantification of Gastric Contractions Using MRI with a Natural Contrast Agent. EMBC (2021)
Omkar N. Athavale, Niranchan Paskaranandavadivel, Timothy R. Angeli, Recep Avci, Leo K. Cheng
. EMBC (2020)
Nipuni D. Nagahawatte, Niranchan Paskaranandavadivel, Timothy R. Angeli, Leo K. Cheng, Recep Avci
. EMBC (2020)
Chih-Hsiang Alexander Chan, Zahra Aghababaie, Niranchan Paskaranandavadivel, Leo K. Cheng, Recep Avci, Timothy R. Angeli
Trace Mapping: A New Visualization Technique for Analyzing Gastrointestinal High-Resolution Electrical Mapping Data. EMBC (2020)
Henry Han, Leo K. Cheng, Recep Avci, Niranchan Paskaranandavadivel
Detection of Slow Wave Propagation Direction Using Bipolar High-Resolution Recordings. EMBC (2020)
Saeed Hosseini, Recep Avci, Niranchan Paskaranandavadivel, Nadun Palmada, Vinod Suresh, Leo K. Cheng
. EMBC (2020)
Recep Avci, Niranchan Paskaranandavadivel, Peng Du, Jean-Marie Vanderwinden, Leo K. Cheng
Continuum Based Bioelectrical Simulations using Structurally Realistic Gastrointestinal Pacemaker Cell Networks. EMBC (2020)
Sachira Kuruppu, Leo K. Cheng, Timothy R. Angeli, Recep Avci, Niranchan Paskaranandavadivel
High-Resolution Mapping of Intestinal Spike Bursts and Motility. EMBC (2020)
Recep Avci, Niranchan Paskaranandavadivel, Chad E. Eichler, Byron Y. C. Lam, Timothy R. Angeli, Leonard A. Bradshaw, Leo K. Cheng
Computational Reconstruction of 3D Stomach Geometry using Magnetic Field Source Localization. EMBC (2020)
Mikhael Sayat, Zahra Aghababaie, Leo K. Cheng, Niranchan Paskaranandavadivel, Recep Avci, Johan Rickus, Wharengaro Ruha, Timothy R. Angeli
Transmural Temperature Monitoring to Quantify Thermal Conduction And Lesion Formation During Gastric Ablation, an Emerging Therapy for Gastric Dysrhythmias. EMBC (2020)
Kiara J. W. Miller, Leo K. Cheng, Timothy R. Angeli, Recep Avci, Niranchan Paskaranandavadivel
. EMBC (2020)
Chad E. Eichler, Leo K. Cheng, Peng Du, Stefan Calder, Niranchan Paskaranandavadivel, Leonard A. Bradshaw, Recep Avci
Simulation-based Analysis of Magnetogastrography Sensor Configurations for Characterizing Gastric Slow Wave Dysrhythmias. EMBC (2020)
Sue Ann Mah, Recep Avci, Peng Du, Jean-Marie Vanderwinden, Leo K. Cheng
Supervised Machine Learning Segmentation and Quantification of Gastric Pacemaker Cells. EMBC (2020)
Zahra Aghababaie, Kevin Jamart, Chih-Hsiang Alexander Chan, Satya Amirapu, Leo K. Cheng, Niranchan Paskaranandavadivel, Recep Avci, Timothy R. Angeli
A V-Net Based Deep Learning Model for Segmentation and Classification of Histological Images of Gastric Ablation. EMBC (2020)
Recep Avci, Niranchan Paskaranandavadivel, Stefan Calder, Peng Du, Leonard A. Bradshaw, Leo K. Cheng
Source localization for gastric electrical activity using simulated magnetogastrographic data. EMBC (2019)
Niranchan Paskaranandavadivel, Recep Avci, Leo K. Cheng
Quantification of Dynamic Gastric Slow Wave Activity using Recurrence Plots. EMBC (2019)
Sachira Kuruppu, Leo K. Cheng, Timothy R. Angeli, Recep Avci, Niranchan Paskaranandavadivel
A Framework for Spatiotemporal Analysis of Gastrointestinal Spike Burst Propagation. EMBC (2019)
Recep Avci, Diana I. Escalona-Vargas, Eric R. Siegel, Curtis L. Lowery, Hari Eswaran
Coupling Analysis of Fetal and Maternal Heart Rates via Transfer Entropy Using Magnetocardiography. EMBC (2018)
Recep Avci, James D. Wilson, Diana I. Escalona-Vargas, Hari Eswaran
Tracking Fetal Movement Through Source Localization From Multisensor Magnetocardiographic Recordings. IEEE J. Biomed. Health Informatics 22 (3) (2018)
Thomas Ryan Stovall, Sinan Kockara, Recep Avci
GPUSCAN: GPU-Based Parallel Structural Clustering Algorithm for Networks. IEEE Trans. Parallel Distributed Syst. 26 (12) (2015)