Christopher G. Chute

ORCID

Publication Activity (10 Years)

Years Active: 1992-2023
Publications (10 Years): 46

Top Venues

AMIA

J. Am. Medical Informatics Assoc.

MedInfo

J. Biomed. Informatics

Publications

Emily R. Pfaff, Andrew T. Girvin, Miles Crosskey, Srushti Gangireddy, Hiral Master, Wei-Qi Wei, Vern Eric Kerchberger, Mark G. Weiner, Paul A. Harris, Melissa A. Basford, Christopher Lunt, Christopher G. Chute, Richard A. Moffitt, Melissa A. Haendel
data repository. J. Am. Medical Informatics Assoc. 30 (7) (2023)
Peter Leese, Adit Anand, Andrew T. Girvin, Amin Manna, Saaya Patel, Yun Jae Yoo, Rachel Wong, Melissa A. Haendel, Christopher G. Chute, Tellen D. Bennett, Janos G. Hajagos, Emily R. Pfaff, Richard A. Moffitt
Clinical encounter heterogeneity and methods for resolving in networked EHR data: a study from N3C and RECOVER programs. J. Am. Medical Informatics Assoc. 30 (6) (2023)
Sijia Liu, Andrew Wen, Liwei Wang, Huan He, Sunyang Fu, Robert T. Miller, Andrew E. Williams, Daniel R. Harris, Ramakanth Kavuluru, Mei Liu, Noor Abu-El-Rub, Dalton Schutte, Rui Zhang, Masoud Rouhizadeh, John D. Osborne, Yongqun He, Umit Topaloglu, Stephanie S. Hong, Joel H. Saltz, Thomas Schaffter, Emily R. Pfaff, Christopher G. Chute, Tim Duong, Melissa A. Haendel, Rafael Fuentes, Peter Szolovits, Hua Xu, Hongfang Liu
An open natural language processing (NLP) framework for EHR-based clinical research: a case demonstration using the National COVID Cohort Collaborative (N3C). J. Am. Medical Informatics Assoc. 30 (12) (2023)
Pascal S. Brandt, Abel N. Kho, Yuan Luo, Jennifer A. Pacheco, Theresa L. Walunas, Hakon Hakonarson, George Hripcsak, Cong Liu, Ning Shang, Chunhua Weng, Nephi Walton, David S. Carrell, Paul K. Crane, Eric B. Larson, Christopher G. Chute, Iftikhar J. Kullo, Robert J. Carroll, Joshua C. Denny, Andrea H. Ramirez, Wei-Qi Wei, Jyotishman Pathak, Laura K. Wiley, Rachel L. Richesson, Justin B. Starren, Luke V. Rasmussen
Characterizing variability of electronic health record-driven phenotype definitions. J. Am. Medical Informatics Assoc. 30 (3) (2023)
Guohui Xiao, Emily R. Pfaff, Eric Prud'hommeaux, David Booth, Deepak K. Sharma, Nan Huo, Yue Yu, Nansu Zong, Kathryn J. Ruddy, Christopher G. Chute, Guoqian Jiang
FHIR-Ontop-OMOP: Querying OMOP clinical databases as FHIR-compliant Clinical Knowledge Graphs. SWAT4HCLS (2023)
Nicolas Matentzoglu, James P. Balhoff, Susan M. Bello, Chris Bizon, Matthew H. Brush, Tiffany J. Callahan, Christopher G. Chute, William D. Duncan, Chris T. A. Evelo, Davera Gabriel, John Graybeal, Alasdair J. G. Gray, Benjamin M. Gyori, Melissa A. Haendel, Henriette Harmse, Nomi L. Harris, Ian Harrow, Harshad Hegde, Amelia L. Hoyt, Charles Tapley Hoyt, Dazhi Jiao, Ernesto Jiménez-Ruiz, Simon Jupp, Hyeongsik Kim, Sebastian Köhler, Thomas Liener, Qinqin Long, James Malone, James A. McLaughlin, Julie A. McMurry, Sierra Moxon, Monica C. Munoz-Torres, David Osumi-Sutherland, James A. Overton, Bjoern Peters, Tim E. Putman, Núria Queralt-Rosinach, Kent A. Shefchek, Harold Solbrig, Anne E. Thessen, Tania Tudorache, Nicole A. Vasilevsky, Alex H. Wagner, Christopher J. Mungall
A Simple Standard for Sharing Ontological Mappings (SSSOM). Database J. Biol. Databases Curation 2022 (2022) (2022)
Emily R. Pfaff, Andrew T. Girvin, Davera Gabriel, Kristin Kostka, Michele Morris, Matvey B. Palchuk, Harold P. Lehmann, Benjamin R. C. Amor, Mark Bissell, Katie R. Bradwell, Sigfried Gold, Stephanie S. Hong, Johanna Loomba, Amin Manna, Julie A. McMurry, Emily Niehaus, Nabeel Qureshi, Anita Walden, Xiaohan Tanner Zhang, Richard L. Zhu, Richard A. Moffitt, Christopher G. Chute, William G. Adams, Shaymaa Al-Shukri, Alfred Anzalone, Ahmad Baghal, Tellen D. Bennett, Elmer V. Bernstam, Mark M. Bissell, Brian Bush, Thomas R. Campion Jr., Victor Castro, Jack Chang, Deepa D. Chaudhari, Wenjin Chen, San Chu, James J. Cimino, Keith A. Crandall, Mark Crooks, Sara J. Deakyne Davies, John Dipalazzo, David Dorr, Dan Eckrich, Sarah E. Eltinge, Daniel G. Fort, George Golovko, Snehil Gupta, Melissa A. Haendel, Janos G. Hajagos, David A. Hanauer, Brett M. Harnett, Ronald Horswell, Nancy Huang, Steven G. Johnson, Michael Kahn, Kamil Khanipov, Curtis Kieler, Katherine Ruiz De Luzuriaga, Sarah Maidlow, Ashley Martinez, Jomol Mathew, James C. McClay, Gabriel McMahan, Brian Melancon, Stéphane M. Meystre, Lucio Miele, Hiroki Morizono, Ray Pablo, Lav P. Patel, Jimmy Phuong, Daniel J. Popham, Claudia P. Pulgarin, Carlos Santos, Indra Neil Sarkar, Nancy Sazo, Soko Setoguchi, Selvin Soby, Sirisha Surampalli, Christine Suver, Uma Maheswara Reddy Vangala, Shyam Visweswaran, James von Oehsen, Kellie M. Walters, Laura Wiley, David A. Williams, Adrian H. Zai
Synergies between centralized and federated approaches to data quality: a report from the national COVID cohort collaborative. J. Am. Medical Informatics Assoc. 29 (4) (2022)
Saurav Sengupta, Johanna Loomba, Suchetha Sharma, Donald E. Brown, Lorna E. Thorpe, Melissa A. Haendel, Christopher G. Chute, Stephanie S. Hong
Analyzing historical diagnosis code data from NIH N3C and RECOVER Programs using deep learning to determine risk factors for Long Covid. BIBM (2022)
Christopher G. Chute, Susan H. Fenton, Mary H. Stanfill, Kathy L. Giannangelo
Making a Case for Adoption of ICD-11 Morbidity Reporting in the U.S.: Multiple Perspectives. AMIA (2022)
Guohui Xiao, Emily R. Pfaff, Eric Prud'hommeaux, David Booth, Deepak K. Sharma, Nan Huo, Yue Yu, Nansu Zong, Kathryn J. Ruddy, Christopher G. Chute, Guoqian Jiang
FHIR-Ontop-OMOP: Building clinical knowledge graphs in FHIR RDF with the OMOP Common data Model. J. Biomed. Informatics 134 (2022)
Yue Yu, Kathryn J. Ruddy, Nan Huo, Nansu Zong, Deirdre Pachman, Christopher G. Chute, Emily R. Pfaff, Andrea Cheville, Guoqian Jiang
A Comparative Study on the Capability of Real-World Antineoplastic Drug Data Collection by CanMED, ATC and HemOnc. AMIA (2022)
Saurav Sengupta, Johanna Loomba, Suchetha Sharma, Donald E. Brown, Lorna E. Thorpe, Melissa A. Haendel, Christopher G. Chute, Stephanie S. Hong
Analyzing historical diagnosis code data from NIH N3C and RECOVER Programs using deep learning to determine risk factors for Long Covid. CoRR (2022)
Yue Yu, Nansu Zong, Andrew Wen, Sijia Liu, Daniel J. Stone, David Knaack, Alanna M. Chamberlain, Emily R. Pfaff, Davera Gabriel, Christopher G. Chute, Nilay Shah, Guoqian Jiang
Developing an ETL tool for converting the PCORnet CDM into the OMOP CDM to facilitate the COVID-19 data integration. J. Biomed. Informatics 127 (2022)
Katie R. Bradwell, Jacob T. Wooldridge, Benjamin R. C. Amor, Tellen D. Bennett, Adit Anand, Carolyn Bremer, Yun Jae Yoo, Zhenglong Qian, Steven G. Johnson, Emily R. Pfaff, Andrew T. Girvin, Amin Manna, Emily Niehaus, Stephanie S. Hong, Xiaohan Tanner Zhang, Richard L. Zhu, Mark Bissell, Nabeel Qureshi, Joel H. Saltz, Melissa A. Haendel, Christopher G. Chute, Harold P. Lehmann, Richard A. Moffitt
Harmonizing units and values of quantitative data elements in a very large nationally pooled electronic health record (EHR) dataset. J. Am. Medical Informatics Assoc. 29 (7) (2022)
Jason A. Thomas, Randi E. Foraker, Noa Zamstein, Jon D. Morrow, Philip R. O. Payne, Adam B. Wilcox, Melissa A. Haendel, Christopher G. Chute, Kenneth R. Gersing, Anita Walden, Tellen D. Bennett, David A. Eichmann, Justin Guinney, Warren A. Kibbe, Hongfang Liu, Emily R. Pfaff, Peter N. Robinson, Joel H. Saltz, Heidi Spratt, Justin Starren, Christine Suver, Chunlei Wu, Davera Gabriel, Stephanie S. Hong, Kristin Kostka, Harold P. Lehmann, Richard A. Moffitt, Michele Morris, Matvey B. Palchuk, Xiaohan Tanner Zhang, Richard L. Zhu, Benjamin R. C. Amor, Mark M. Bissell, Marshall Clark, Andrew T. Girvin, Adam M. Lee, Robert T. Miller, Kellie M. Walters, Yooree Chae, Connor Cook, Alexandra Dest, Racquel R. Dietz, Thomas Dillon, Patricia A. Francis, Rafael Fuentes, Alexis Graves, Andrew J. Neumann, Shawn T. O'Neil, Usman Sheikh, Andréa M. Volz, Elizabeth Zampino, Christopher P. Austin, Samuel Bozzette, Mariam Deacy, Nicole Garbarini, Michael G. Kurilla, Sam G. Michael, Joni L. Rutter, Meredith Temple-O'Connor, Katie Rebecca Bradwell, Amin Manna, Nabeel Qureshi, Mary Morrison Saltz, Julie A. McMurry, Carolyn Bramante, Jeremy Richard Harper, Wenndy Hernandez, Farrukh M. Koraishy, Federico Mariona, Saidulu Mattapally, Amit Saha, Satyanarayana Vedula, Yujuan Fu, Nisha Mathews, Ofer Mendelevitch
Demonstrating an approach for evaluating synthetic geospatial and temporal epidemiologic data utility: results from analyzing >1.8 million SARS-CoV-2 tests in the United States National COVID Cohort Collaborative (N3C). J. Am. Medical Informatics Assoc. 29 (8) (2022)
Nan Huo, Yue Yu, Nansu Zong, Andrea Cheville, Claude Nanjo, Eric Prud'hommeaux, Deirdre Pachman, Guohui Xiao, Emily R. Pfaff, Christopher G. Chute, Guoqian Jiang, Kathryn J. Ruddy
Modeling a Cancer Symptom Control Domain Using HL7 FHIR: Applicability of the Minimal Common Oncology Data Elements (mCODE). AMIA (2022)
Nicolas Matentzoglu, James P. Balhoff, Susan M. Bello, Chris Bizon, Matthew H. Brush, Tiffany J. Callahan, Christopher G. Chute, William D. Duncan, Chris T. A. Evelo, Davera Gabriel, John Graybeal, Alasdair J. G. Gray, Benjamin M. Gyori, Melissa A. Haendel, Henriette Harmse, Nomi L. Harris, Ian Harrow, Harshad Hegde, Amelia L. Hoyt, Charles Tapley Hoyt, Dazhi Jiao, Ernesto Jiménez-Ruiz, Simon Jupp, Hyeongsik Kim, Sebastian Köhler, Thomas Liener, Qinqin Long, James Malone, James A. McLaughlin, Julie A. McMurry, Sierra A. T. Moxon, Monica C. Munoz-Torres, David Osumi-Sutherland, James A. Overton, Bjoern Peters, Tim E. Putman, Núria Queralt-Rosinach, Kent A. Shefchek, Harold Solbrig, Anne E. Thessen, Tania Tudorache, Nicole A. Vasilevsky, Alex H. Wagner, Christopher J. Mungall
A Simple Standard for Sharing Ontological Mappings (SSSOM). CoRR (2021)
Saskia E. Drösler, Stefanie Weber, Christopher G. Chute
ICD-11 extension codes support detailed clinical abstraction and comprehensive classification. BMC Medical Informatics Decis. Mak. (6) (2021)
Sebastian Köhler, Michael A. Gargano, Nicolas Matentzoglu, Leigh Carmody, David Lewis-Smith, Nicole A. Vasilevsky, Daniel Danis, Ganna Balagura, Gareth Baynam, Amy M. Brower, Tiffany J. Callahan, Christopher G. Chute, Johanna L. Est, Peter D. Galer, Shiva Ganesan, Matthias Griese, Matthias Haimel, Julia Pazmandi, Marc Hanauer, Nomi L. Harris, Michael Hartnett, Maximilian Hastreiter, Fabian Hauck, Yongqun He, Tim Jeske, Hugh Kearney, Gerhard Kindle, Christoph Klein, Katrin Knoflach, Roland Krause, David Lagorce, Julie A. McMurry, Jillian A. Miller, Monica C. Munoz-Torres, Rebecca L. Peters, Christina K. Rapp, Ana Rath, Shahmir A. Rind, Avi Z. Rosenberg, Michael M. Segal, Markus G. Seidel, Damian Smedley, Tomer Talmy, Yarlalu Thomas, Samuel A. Wiafe, Julie Xian, Zafer Yüksel, Ingo Helbig, Christopher J. Mungall, Melissa A. Haendel, Peter N. Robinson
The Human Phenotype Ontology in 2021. Nucleic Acids Res. 49 (Database-Issue) (2021)
Alan J. Forster, Christopher G. Chute, Harold Alan Pincus, William A. Ghali
ICD-11: A catalyst for advancing patient safety surveillance globally. BMC Medical Informatics Decis. Mak. (6) (2021)
Melissa A. Haendel, Christopher G. Chute, Tellen D. Bennett, David A. Eichmann, Justin Guinney, Warren A. Kibbe, Philip R. O. Payne, Emily R. Pfaff, Peter N. Robinson, Joel H. Saltz, Heidi Spratt, Christine Suver, John Wilbanks, Adam B. Wilcox, Andrew E. Williams, Chunlei Wu, Clair Blacketer, Robert L. Bradford, James J. Cimino, Marshall Clark, Evan W. Colmenares, Patricia A. Francis, Davera Gabriel, Alexis Graves, Raju Hemadri, Stephanie S. Hong, George Hripcsak, Dazhi Jiao, Jeffrey G. Klann, Kristin Kostka, Adam M. Lee, Harold P. Lehmann, Lora Lingrey, Robert T. Miller, Michele Morris, Shawn N. Murphy, Karthik Natarajan, Matvey B. Palchuk, Usman Sheikh, Harold Solbrig, Shyam Visweswaran, Anita Walden, Kellie M. Walters, Griffin M. Weber, Xiaohan Tanner Zhang, Richard L. Zhu, Benjamin Amor, Andrew T. Girvin, Amin Manna, Nabeel Qureshi, Michael G. Kurilla, Sam G. Michael, Lili M. Portilla, Joni L. Rutter, Christopher P. Austin, Ken R. Gersing
The National COVID Cohort Collaborative (N3C): Rationale, design, infrastructure, and deployment. J. Am. Medical Informatics Assoc. 28 (3) (2021)
Christopher G. Chute, Can Çelik
Overview of ICD-11 architecture and structure. BMC Medical Informatics Decis. Mak. (6) (2021)
James E. Harrison, Stefanie Weber, Robert Jakob, Christopher G. Chute
ICD-11: an international classification of diseases for the twenty-first century. BMC Medical Informatics Decis. Mak. (6) (2021)
Sijia Liu, Andrew Wen, Liwei Wang, Huan He, Sunyang Fu, Robert T. Miller, Andrew E. Williams, Daniel R. Harris, Ramakanth Kavuluru, Mei Liu, Noor Abu-El-Rub, Rui Zhang, John D. Osborne, Masoud Rouhizadeh, Yongqun He, Emily R. Pfaff, Christopher G. Chute, Tim Duong, Melissa A. Haendel, Rafael Fuentes, Peter Szolovits, Hua Xu, Hongfang Liu
An Open Natural Language Processing Development Framework for EHR-based Clinical Research: A case demonstration using the National COVID Cohort Collaborative (N3C). CoRR (2021)
Kristy Mabon, Olafr Steinum, Christopher G. Chute
Postcoordination of codes in ICD-11. BMC Medical Informatics Decis. Mak. (6) (2021)
Samson W. Tu, Csongor Nyulas, Tania Tudorache, Mark A. Musen, Andrea Martinuzzi, Coen H. van Gool, Vincenzo Della Mea, Christopher G. Chute, Lucilla Frattura, Nicholas R. Hardiker, Huib ten Napel, Richard Madden, Ann-Helene Almborg, Jeewani Anupama Ginige, Catherine Sykes, Can Çelik, Robert Jakob
Toward a Harmonized WHO Family of International Classifications Content Model. AMIA (2020)
Samson W. Tu, Csongor I. Nyulas, Tania Tudorache, Mark A. Musen, Andrea Martinuzzi, Coen H. van Gool, Vincenzo Della Mea, Christopher G. Chute, Lucilla Frattura, Nick Hardiker, Huib ten Napel, Richard Madden, Ann-Helene Almborg, Jeewani Anupama Ginige, Catherine Sykes, Can Celik, Robert Jakob
Toward a Harmonized WHO Family of International Classifications Content Model. MIE (2020)
Christopher G. Chute, Suzanne Bakken, William M. Tierney, Gretchen Purcell Jackson, James J. Cimino
The 2018 fellow cohort of the American College of Medical Informatics. J. Am. Medical Informatics Assoc. 26 (10) (2019)
Xingmin Aaron Zhang, Amy Yates, Nicole A. Vasilevsky, Jean-Philippe F. Gourdine, Tiffany J. Callahan, Leigh C. Carmody, Daniel Danis, Marcin P. Joachimiak, Vida Ravanmehr, Emily R. Pfaff, James Champion, Kimberly Robasky, Hao Xu, Karamarie Fecho, Nephi A. Walton, Richard L. Zhu, Justin Ramsdill, Christopher J. Mungall, Sebastian Köhler, Melissa A. Haendel, Clement J. McDonald, Daniel J. Vreeman, David B. Peden, Tellen D. Bennett, James A. Feinstein, Blake Martin, Adrianne L. Stefanski, Lawrence E. Hunter, Christopher G. Chute, Peter N. Robinson
Semantic integration of clinical laboratory tests from electronic health records for deep phenotyping and biomarker discovery. npj Digit. Medicine 2 (2019)
Alan L. Rector, Stefan Schulz, Jean Marie Rodrigues, Christopher G. Chute, Harold Solbrig
On beyond Gruber: "Ontologies" in today's biomedical information systems and the limits of OWL. J. Biomed. Informatics X 2 (2019)
Karamarie Fecho, Stanley C. Ahalt, Saravanan Arunachalam, James Champion, Christopher G. Chute, Sarah Davis, Kenneth Gersing, Gustavo Glusman, Jennifer Hadlock, Jewel Lee, Emily R. Pfaff, Max Robinson, Eric Sid, Casey N. Ta, Hao Xu, Richard Zhu, Qian Zhu, David B. Peden
Sex, obesity, diabetes, and exposure to particulate matter among patients with severe asthma: Scientific insights from a comparative analysis of open clinical data sources during a five-day hackathon. J. Biomed. Informatics 100 (2019)
Yizhen Zhong, Luke V. Rasmussen, Yu Deng, Jennifer A. Pacheco, Maureen E. Smith, Justin Starren, Wei-Qi Wei, Peter Speltz, Joshua C. Denny, Nephi Walton, George Hripcsak, Christopher G. Chute, Yuan Luo
Characterizing Design Patterns of EHR-Driven Phenotype Extraction Algorithms. BIBM (2018)
Yizhen Zhong, Luke V. Rasmussen, Yu Deng, Jennifer A. Pacheco, Maureen E. Smith, Justin Starren, Wei-Qi Wei, Peter Speltz, Joshua C. Denny, Nephi Walton, George Hripcsak, Christopher G. Chute, Yuan Luo
Characterizing Design Patterns of EHR-Driven Phenotype Extraction Algorithms. CoRR (2018)
Samuel J. Aronson, Lawrence J. Babb, Darren C. Ames, Richard A. Gibbs, Eric Venner, John J. Connelly, Keith Marsolo, Chunhua Weng, Marc S. Williams, Andrea L. Hartzler, Wayne H. Liang, James D. Ralston, Emily Beth Devine, Shawn N. Murphy, Christopher G. Chute, Pedro J. Caraballo, Iftikhar J. Kullo, Robert R. Freimuth, Luke V. Rasmussen, Firas H. Wehbe, Josh F. Peterson, Jamie R. Robinson, Ken Wiley, Casey Overby Taylor, eMERGE Network EHRI Working Group
Empowering genomic medicine by establishing critical sequencing result data flows: the eMERGE example. J. Am. Medical Informatics Assoc. 25 (10) (2018)
Kavishwar B. Wagholikar, Joshua C. Mandel, Jeffrey G. Klann, Nich Wattanasin, Michael Mendis, Christopher G. Chute, Kenneth D. Mandl, Shawn N. Murphy
SMART-on-FHIR implemented over i2b2. J. Am. Medical Informatics Assoc. 24 (2) (2017)
Stefan Schulz, Jean Marie Rodrigues, Alan L. Rector, Christopher G. Chute
Interface Terminologies, Reference Terminologies and Aggregation Terminologies: A Strategy for Better Integration. MedInfo (2017)
Christopher G. Chute, Stanley M. Huff
The Pluripotent Rendering of Clinical Data for Precision Medicine. MedInfo (2017)
Casey L. Overby, Phillip Thompkins, Harold P. Lehmann, Christopher G. Chute, Jeanne Sheffield
Value of Genetics-informed Drug Dosing Guidance in Pregnant Women: A Needs Assessment with Obstetric Healthcare Providers at Johns Hopkins. AMIA (2017)
Deepak K. Sharma, Harold R. Solbrig, Cui Tao, Chunhua Weng, Christopher G. Chute, Guoqian Jiang
Building a semantic web-based metadata repository for facilitating detailed clinical modeling in cancer genome studies. J. Biomed. Semant. 8 (1) (2017)
Kavishwar B. Wagholikar, Joshua C. Mandel, Jeffrey G. Klann, Nich Wattanasin, Michael Mendis, Christopher G. Chute, Kenneth D. Mandl, Shawn N. Murphy
Read only SMART on FHIR Façade for I2b2. CRI (2016)
Na Hong, Jyotishman Pathak, Christopher G. Chute, Guoqian Jiang
Developing a modular architecture for creation of rule-based clinical diagnostic criteria. BioData Min. 9 (2016)
Casey L. Overby, John J. Connolly, Christopher G. Chute, Joshua C. Denny, Robert R. Freimuth, Andrea L. Hartzler, Ingrid A. Holm, Shannon F. Manzi, Jyotishman Pathak, Peggy L. Peissig, Maureen E. Smith, Marc S. Williams, Brian H. Shirts, Elena M. Stoffel, Peter Tarczy-Hornoch, Carolyn Rohrer Vitek, Wendy A. Wolf, Justin Starren, Luke V. Rasmussen
Practical considerations for implementing genomic information resources. Appl. Clin. Inform. 7 (03) (2016)
Eric Prud'hommeaux, Harold R. Solbrig, Deepak K. Sharma, Christopher G. Chute, Guoqian Jiang
A Semantic Web RDF-based Approach for Modeling HL7 FHIR Profiles. CRI (2016)
Thomas A. Oniki, Ning Zhuo, Calvin E. Beebe, Hongfang Liu, Joseph F. Coyle, Craig G. Parker, Harold R. Solbrig, Kyle Marchant, Vinod Kaggal, Christopher G. Chute, Stanley M. Huff
Clinical element models in the SHARPn consortium. J. Am. Medical Informatics Assoc. 23 (2) (2016)
Guoqian Jiang, Richard C. Kiefer, Luke V. Rasmussen, Harold R. Solbrig, Huan Mo, Jennifer A. Pacheco, Jie Xu, Enid N. H. Montague, William K. Thompson, Joshua C. Denny, Christopher G. Chute, Jyotishman Pathak
Developing a data element repository to support EHR-driven phenotype algorithm authoring and execution. J. Biomed. Informatics 62 (2016)
Guoqian Jiang, Julie Evans, Cory M. Endle, Harold R. Solbrig, Christopher G. Chute
Using Semantic Web technologies for the generation of domain-specific templates to support clinical study metadata standards. J. Biomed. Semant. 7 (2016)
Guoqian Jiang, Harold R. Solbrig, Richard C. Kiefer, Luke V. Rasmussen, Huan Mo, Peter Speltz, William K. Thompson, Joshua C. Denny, Christopher G. Chute, Jyotishman Pathak
A Standards-based Semantic Metadata Repository to Support EHR-driven Phenotype Authoring and Execution. MedInfo (2015)
Na Hong, Guoqian Jiang, Jyotishman Pathak, Christopher G. Chute
Developing a Modular Architecture for Creation of Rule-based Clinical Diagnostic Criteria. BDM2I@ISWC (2015)
Liwei Wang, Hongfang Liu, Christopher G. Chute, Qian Zhu
Cancer based pharmacogenomics network supported with scientific evidences: from the view of drug repurposing. BioData Min. 8 (2015)
Alan L. Rector, James R. Campbell, Bedirhan Üstün, Christopher G. Chute, Harold R. Solbrig
Harmonization of ICD-11 and SNOMED CT - Not just mapping! Practical and Theoretical Lessons & Benefits to Users and Implementers. AMIA (2015)
Jean Marie Rodrigues, David J. Robinson, Vincenzo Della Mea, James R. Campbell, Alan L. Rector, Stefan Schulz, Hazel Brear, Bedirhan Üstün, Kent A. Spackman, Christopher G. Chute, Jane Millar, Harold R. Solbrig, Kristina Brand Persson
Semantic Alignment between ICD-11 and SNOMED CT. MedInfo (2015)
Guoqian Jiang, Harold R. Solbrig, Richard C. Kiefer, Luke V. Rasmussen, Huan Mo, Jennifer A. Pacheco, Enid N. H. Montague, Jie Xu, Peter Speltz, William K. Thompson, Joshua C. Denny, Christopher G. Chute, Jyotishman Pathak
Harmonization of Quality Data Model with HL7 FHIR to Support EHR-driven Phenotype Authoring and Execution: A Pilot Study. AMIA (2015)
Guoqian Jiang, Harold R. Solbrig, Jyotishman Pathak, Christopher G. Chute
Developing a Standards-Based Information Model for Representing Computable Diagnostic Criteria: A Feasibility Study of the NQF Quality Data Model. MedInfo (2015)
Harold R. Solbrig, Eric Prud'hommeaux, Deepak K. Sharma, Christopher G. Chute, Guoqian Jiang
Feasibility of Modeling HL7 FHIR Profiles Using RDF Shape Expressions Language. SWAT4LS (2015)
Brian H. Shirts, Joseph S. Salama, Samuel J. Aronson, Wendy K. Chung, Stacy W. Gray, Lucia A. Hindorff, Gail P. Jarvik, Sharon E. Plon, Elena M. Stoffel, Peter Tarczy-Hornoch, Eliezer M. Van Allen, Karen E. Weck, Christopher G. Chute, Robert R. Freimuth, Robert Grundmeier, Andrea L. Hartzler, Rongling Li, Peggy L. Peissig, Josh F. Peterson, Luke V. Rasmussen, Justin B. Starren, Marc S. Williams, Casey Lynnette Overby
CSER and eMERGE: current and potential state of the display of genetic information in the electronic health record. J. Am. Medical Informatics Assoc. 22 (6) (2015)
María Del Carmen Legaz-García, Marcos Menárguez Tortosa, Jesualdo Tomás Fernández-Breis, Christopher G. Chute, Cui Tao
Transformation of standardized clinical models based on OWL technologies: from CEM to OpenEHR archetypes. J. Am. Medical Informatics Assoc. 22 (3) (2015)
Harold R. Solbrig, Eric Prud'hommeaux, Christopher G. Chute, Guoqian Jiang
Representing and Validating Cancer Study Metadata Standard Using RDF Shapes Expression Language. AMIA (2015)
Qian Zhu, Hongfang Liu, Christopher G. Chute, Matthew Ferber
EHR based Genetic Testing Knowledge Base (iGTKB) Development. BMC Medical Informatics Decis. Mak. (4) (2015)
Huan Mo, William K. Thompson, Luke V. Rasmussen, Jennifer A. Pacheco, Guoqian Jiang, Richard C. Kiefer, Qian Zhu, Jie Xu, Enid N. H. Montague, David S. Carrell, Todd Lingren, Frank D. Mentch, Yizhao Ni, Firas H. Wehbe, Peggy L. Peissig, Gerard Tromp, Eric B. Larson, Christopher G. Chute, Jyotishman Pathak, Joshua C. Denny, Peter Speltz, Abel N. Kho, Gail P. Jarvik, Cosmin Adrian Bejan, Marc S. Williams, Kenneth Borthwick, Terrie E. Kitchner, Dan M. Roden, Paul A. Harris
Desiderata for computable representations of electronic health records-driven phenotype algorithms. J. Am. Medical Informatics Assoc. 22 (6) (2015)
Rachel L. Richesson, Christopher G. Chute
Health information technology data standards get down to business: maturation within domains and the emergence of interoperability. J. Am. Medical Informatics Assoc. 22 (3) (2015)
Na Hong, Dingcheng Li, Yue Yu, Hongfang Liu, Christopher G. Chute, Guoqian Jiang
Representing Clinical Diagnostic Criteria in Quality Data Model Using Natural Language Processing. BioNLP@IJCNLP (2015)
Guoqian Jiang, Hongfang Liu, Harold R. Solbrig, Christopher G. Chute
Mining severe drug-drug interaction adverse events using Semantic Web technologies: a case study. BioData Min. 8 (2015)
Na Hong, Guoqian Jiang, Jyotishman Pathak, Christopher G. Chute
A Pilot Study on Modeling of Diagnostic Criteria Using OWL and SWRL. MedInfo (2015)
Guoqian Jiang, Harold R. Solbrig, Eric Prud'hommeaux, Cui Tao, Chunhua Weng, Christopher G. Chute
Quality Assurance of Cancer Study Common Data Elements Using A Post-Coordination Approach. AMIA (2015)
Kimberly Clark, Deepak K. Sharma, Rui Qin, Christopher G. Chute, Cui Tao
A use case study on late stent thrombosis for ontology-based temporal reasoning and analysis. J. Biomed. Semant. 5 (2014)
George Hripcsak, Meryl Bloomrosen, Patti Flatley Brennan, Christopher G. Chute, James J. Cimino, Don E. Detmer, Margo Edmunds, Peter J. Embí, Melissa M. Goldstein, William Ed Hammond, Gail M. Keenan, Steven E. Labkoff, Shawn P. Murphy, Charles Safran, Stuart M. Speedie, Howard R. Strasberg, Freda Temple, Adam B. Wilcox
Health data use, stewardship, and governance: ongoing gaps and challenges: a report from AMIA's 2012 Health Policy Meeting. J. Am. Medical Informatics Assoc. 21 (2) (2014)
Guoqian Jiang, Hongfang Liu, Harold R. Solbrig, Christopher G. Chute
Mining Severe Drug-Drug Interaction Adverse Events Using Semantic Web Technologies: A Case Study. PAKDD Workshops (2014)
Robert R. Freimuth, Kelly Wix, Qian Zhu, Mark Siska, Christopher G. Chute
Evaluation of RxNorm for Medication Clinical Decision Support. AMIA (2014)
Liwei Wang, Hongfang Liu, Christopher G. Chute, Qian Zhu
Cancer Based Pharmacogenomics Network for Drug Repurposing. PAKDD Workshops (2014)
Sunghwan Sohn, Cheryl Clark, Scott R. Halgrim, Sean P. Murphy, Christopher G. Chute, Hongfang Liu
Research and applications: MedXN: an open source medication extraction and normalization tool for clinical text. J. Am. Medical Informatics Assoc. 21 (5) (2014)
Qian Zhu, Cui Tao, Feichen Shen, Christopher G. Chute
Exploring the Pharmacogenomics Knowledge Base (PharmGKB) for Repositioning Breast Cancer Drugs by Leveraging Web Ontology Language (OWL) and Cheminformatics Approaches. Pacific Symposium on Biocomputing (2014)
Guoqian Jiang, Harold R. Solbrig, Bedirhan Üstün, Christopher G. Chute
Lexical Term Standardization of ICD-11 Using Semantic Web Technologies. AMIA (2014)
Vincenzo Della Mea, Omar Vuattolo, Bedirhan Üstün, Alan L. Rector, Stefan Schulz, Jean Marie Rodrigues, Kent A. Spackman, David J. Robinson, Jane Millar, James R. Campbell, Christopher G. Chute, Harold R. Solbrig, Kristina Brand Persson
A Web-Based Tool for Development of a Common Ontology between ICD11 and SNOMED-CT. ICHI (2014)
Jean Marie Rodrigues, Stefan Schulz, Alan L. Rector, Kent A. Spackman, Jane Millar, James R. Campbell, Bedirhan Üstün, Christopher G. Chute, Harold R. Solbrig, Vincenzo Della Mea, Kristina Brand Persson
ICD-11 and SNOMED CT Common Ontology: Circulatory System. MIE (2014)
Qian Zhu, Hongfang Liu, Christopher G. Chute, Matthew Ferber
Genetic testing knowledge base (GTKB) towards individualized genetic test recommendation - An experimental study. BIBM (2014)
Stefan Schulz, Jean Marie Rodrigues, Alan L. Rector, Kent A. Spackman, James R. Campbell, Bedirhan Üstün, Christopher G. Chute, Harold R. Solbrig, Vincenzo Della Mea, Jane Millar, Kristina Brand Persson
What's in a Class? Lessons Learnt from the ICD - SNOMED CT Harmonisation. MIE (2014)
Qian Zhu, Hongfang Liu, Christopher G. Chute, Matthew Ferber
iGenetics: An Individualized Genetic Test Recommendation System Based on EHRs. AMIA (2014)
Feichen Shen, Dingcheng Li, Hongfang Liu, Yugyung Lee, Jyotishman Pathak, Christopher G. Chute, Cui Tao
Using semantic web technologies for quality measure phenotyping algorithm representation and automatic execution on EHR data. BHI (2014)
Chen Wang, Michael T. Zimmermann, Naresh Prodduturi, Christopher G. Chute, Guoqian Jiang
Adverse Drug Event-based Stratification of Tumor Mutations: A Case Study of Breast Cancer Patients Receiving Aromatase Inhibitors. AMIA (2014)
Casey L. Overby, Luke V. Rasmussen, Andrea L. Hartzler, John J. Connolly, Josh F. Peterson, RoseMary Hedberg, Robert R. Freimuth, Brian H. Shirts, Joshua C. Denny, Eric B. Larson, Christopher G. Chute, Gail P. Jarvik, James D. Ralston, Alan R. Shuldiner, Iftikhar J. Kullo, Peter Tarczy-Hornoch, Marc S. Williams
A Template for Authoring and Adapting Genomic Medicine Content in the eMERGE Infobutton Project. AMIA (2014)
Peter J. Haug, Xinzi Wu, Jeffrey P. Ferraro, Guergana Savova, Stanley M. Huff, Christopher G. Chute
Developing a Section Labeler for Clinical Documents. AMIA (2014)
Yuji Zhang, Cui Tao, Guoqian Jiang, Asha A. Nair, Jian Su, Christopher G. Chute, Hongfang Liu
Network-based analysis reveals distinct association patterns in a semantic MEDLINE-based drug-disease-gene network. J. Biomed. Semant. 5 (2014)
Guoqian Jiang, Harold R. Solbrig, Can Celik, Bedirhan Üstün, Christopher G. Chute
Profiling ICD-11 Terminological Content Using the Common Terminology Services 2 (CTS2) Standard. ICBO (2014)
Guoqian Jiang, Deepak K. Sharma, Harold R. Solbrig, Cui Tao, Chunhua Weng, Christopher G. Chute
Building a Semantic Web-based Metadata Repository for Facilitating Detailed Clinical Modeling in Cancer Genome Studies. SWAT4LS (2014)
Siddhartha Jonnalagadda, Soheil Moosavinasab, Chinmoy Nath, Dingcheng Li, Christopher G. Chute, Hongfang Liu
An Automated Approach for Ranking Journals to Help in Clinician Decision Support. AMIA (2014)
Cui Tao, Harold R. Solbrig, Craig Stancl, Kevin J. Peterson, Cory M. Endle, Scott Bauer, Deepak K. Sharma, Christopher G. Chute
Introduction and Implementation of Common Terminology Services 2 (CTS2). AMIA (2013)
Siddhartha Jonnalagadda, Christopher G. Chute, Hongfang Liu
Prioritize journals relevant to a clinical topic: A survey of US cardiologists about heart failure. AMIA (2013)
Piper A. Svensson-Ranallo, Terrence Adam, Katharine J. Nelson, Robert Krueger, Martin LaVenture, Christopher G. Chute
Psychological Assessment Instruments: A Coverage Analysis Using SNOMED CT, LOINC and QS Terminology. AMIA (2013)
Qian Zhu, Jyotishman Pathak, Robert R. Freimuth, Christopher G. Chute
Using standardized clinical data modeling and knowledge representation to compute pharmacogenomic data elements. AMIA (2013)
Cui Tao, Dezhao Song, Deepak K. Sharma, Christopher G. Chute
Semantator: Semantic annotator for converting biomedical text to linked data. J. Biomed. Informatics 46 (5) (2013)
Jyotishman Pathak, Cory M. Endle, Dale Suesse, Kevin J. Peterson, Craig Stancl, Dingcheng Li, Christopher G. Chute
PhenotypePortal: An Open-Source Library and Platform for Authoring, Executing and Visualization of Electronic Health Records Driven Phenotyping Algorithms. AMIA (2013)
Sunghwan Sohn, Cheryl Clark, Scott R. Halgrim, Sean P. Murphy, Christopher G. Chute, Hongfang Liu
Clinical Drug Extraction and Normalization from Clinical Notes. AMIA (2013)
Kimberly Clark, Deepak K. Sharma, Rui Qin, Christopher G. Chute, Cui Tao
Ontology-based Temporal Analysis for Medical Device Adverse Event - A Use Case Study on Late Stent Thrombosis. SWAT4LS (2013)
Sunghwan Sohn, Cheryl Clark, Scott R. Halgrim, Sean P. Murphy, Christopher G. Chute, Hongfang Liu
Medication Extraction and Normalization from Clinical Notes. AMIA (2013)
Qian Zhu, Robert R. Freimuth, Zonghui Lian, Scott Bauer, Jyotishman Pathak, Cui Tao, Matthew J. Durski, Christopher G. Chute
Harmonization and semantic annotation of data dictionaries from the Pharmacogenomics Research Network: A case study. J. Biomed. Informatics 46 (2) (2013)
Jyotishman Pathak, Richard C. Kiefer, Christopher G. Chute
Using Linked Data for Mining Drug-Drug Interactions in Electronic Health Records. MedInfo (2013)
Siddhartha Jonnalagadda, Soheil Moosavinasab, Dingcheng Li, Martin D. Abel, Christopher G. Chute, Hongfang Liu
Prioritizing journals relevant to a topic for addressing clinicians' information needs. BIBM (2013)
Guoqian Jiang, Harold R. Solbrig, Christopher G. Chute
A Semantic Web-Based Approach for Harvesting Multilingual Textual Definitions from Wikipedia to Support ICD-11 Revision. VDOS+DO@ICBO (2013)
Jyotishman Pathak, Richard C. Kiefer, Christopher G. Chute
Mining Anti-coagulant Drug-Drug Interactions from Electronic Health Records Using Linked Data. DILS (2013)
Cui Tao, Dingcheng Li, Feichen Shen, Zonghui Lian, Jyotishman Pathak, Hongfang Liu, Christopher G. Chute
Phenotyping on EHR Data Using OWL and Semantic Web Technologies. ICSH (2013)

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Christopher G. Chute