Siddhartha Jonnalagadda

Publication Activity (10 Years)

Years Active: 2009-2022
Publications (10 Years): 8

Top Venues

J. Biomed. Informatics

AMIA

CoRR

BIBM

Arizona State University, Tempe, USA (PHD)

Education History

Arizona State University, Tempe, USA

PHD

Publications

Jiacheng Xu, Siddhartha Jonnalagadda, Greg Durrett
Massive-scale Decoding for Text Generation using Lattices. NAACL-HLT (2022)
Jiantao Bian, Mohammad Amin Morid, Siddhartha Jonnalagadda, Gang Luo, Guilherme Del Fiol
Automatic identification of high impact articles in PubMed to support clinical decision making. J. Biomed. Informatics 73 (2017)
Tanmay Basu, Shraman Kumar, Abhishek Kalyan, Priyanka Jayaswal, Pawan Goyal, Stephen Pettifer, Siddhartha Jonnalagadda
A Novel Framework to Expedite Systematic Reviews by Automatically Building Information Extraction Training Corpora. CoRR (2016)
Shu Dong, R. Kannan Mutharasan, Siddhartha Jonnalagadda
Using Natural Language Processing to Screen Patients with Active Heart Failure: An Exploration for Hospital-wide Surveillance. CoRR (2016)
Mohammad Amin Morid, Marcelo Fiszman, Kalpana Raja, Siddhartha Jonnalagadda, Guilherme Del Fiol
Classification of clinically useful sentences in clinical evidence resources. J. Biomed. Informatics 60 (2016)
Duy Duc An Bui, Guilherme Del Fiol, John F. Hurdle, Siddhartha Jonnalagadda
Extractive text summarization system to aid data extraction from full text in systematic review development. J. Biomed. Informatics 64 (2016)
Duy Duc An Bui, Guilherme Del Fiol, Siddhartha Jonnalagadda
PDF text classification to leverage information extraction from publication reports. J. Biomed. Informatics 61 (2016)
Guilherme Del Fiol, Javed Mostafa, Dongqiuye Pu, Richard Medlin, Stacey Slager, Siddhartha Jonnalagadda, Charlene R. Weir
Formative evaluation of a patient-specific clinical knowledge summarization tool. Int. J. Medical Informatics 86 (2016)
Duy Duc An Bui, Siddhartha Jonnalagadda, Guilherme Del Fiol
Automatically finding relevant citations for clinical guideline development. J. Biomed. Informatics 57 (2015)
Jakob Stöber, Bret S. E. Heale, Kelley Fulghum, Guilherme Del Fiol, Heejun Kim, Kalpana Raja, Siddhartha Jonnalagadda
Concept based Information Retrieval for Clinical Case Summaries. TREC (2015)
Rashmi Mishra, Jiantao Bian, Marcelo Fiszman, Charlene R. Weir, Siddhartha Jonnalagadda, Javed Mostafa, Guilherme Del Fiol
Text summarization in the biomedical domain: A systematic review of recent research. J. Biomed. Informatics 52 (2014)
Siddhartha Jonnalagadda, Soheil Moosavinasab, Chinmoy Nath, Dingcheng Li, Christopher G. Chute, Hongfang Liu
An Automated Approach for Ranking Journals to Help in Clinician Decision Support. AMIA (2014)
Siddhartha Jonnalagadda, Christopher G. Chute, Hongfang Liu
Prioritize journals relevant to a clinical topic: A survey of US cardiologists about heart failure. AMIA (2013)
Siddhartha Jonnalagadda, Diana B. Petitti
A new iterative method to reduce workload in systematic review process. Int. J. Comput. Biol. Drug Des. 6 (1/2) (2013)
Hongfang Liu, Kavishwar B. Wagholikar, Siddhartha Jonnalagadda, Sunghwan Sohn
Integrated cTAKES for Concept Mention Detection and Normalization. CLEF (Working Notes) (2013)
Siddhartha Jonnalagadda, Soheil Moosavinasab, Dingcheng Li, Martin D. Abel, Christopher G. Chute, Hongfang Liu
Prioritizing journals relevant to a topic for addressing clinicians' information needs. BIBM (2013)
Mingyuan Zhang, Guilherme Del Fiol, Randall Grout, Siddhartha Jonnalagadda, Richard Medlin, Rashmi Mishra, Charlene R. Weir, Hongfang Liu, Javed Mostafa, Marcelo Fiszman
Automatic Identification of Comparative Effectiveness Research from Medline Citations to Support Clinicians' Treatment Information Needs. MedInfo (2013)
Siddhartha Jonnalagadda, Guilherme Del Fiol, Richard Medlin, Charlene R. Weir, Marcelo Fiszman, Javed Mostafa, Hongfang Liu
Automatically extracting sentences from Medline citations to support clinicians' information needs. J. Am. Medical Informatics Assoc. 20 (5) (2013)
Rashmi Mishra, Guilherme Del Fiol, Halil Kilicoglu, Siddhartha Jonnalagadda, Marcelo Fiszman
Automatically Extracting Clinically Useful Sentences from UpToDate to Support Clinicians' Information Needs. AMIA (2013)
Kavishwar B. Wagholikar, Manabu Torii, Siddhartha Jonnalagadda, Hongfang Liu
Pooling annotated corpora for clinical concept extraction. J. Biomed. Semant. 4 (2013)
Dingcheng Li, Hongfang Liu, Christopher G. Chute, Siddhartha Jonnalagadda
Towards assigning references using semantic, journal and citation relevance. BIBM (2013)
Sunghwan Sohn, Kavishwar B. Wagholikar, Dingcheng Li, Siddhartha Jonnalagadda, Cui Tao, Ravikumar Komandur Elayavilli, Hongfang Liu
Comprehensive temporal information detection from clinical text: medical events, time, and TLINK identification. J. Am. Medical Informatics Assoc. 20 (5) (2013)
Siddhartha Jonnalagadda, Trevor Cohen, Stephen T. Wu, Graciela Gonzalez
Enhancing clinical concept extraction with distributional semantics. J. Biomed. Informatics 45 (1) (2012)
Sunghwan Sohn, Sean P. Murphy, Siddhartha Jonnalagadda, Kavishwar B. Wagholikar, Stephen T. Wu, Christopher G. Chute, Hongfang Liu, Scott R. Halgrim
Systematic Analysis of Cross-Institutional Medication Description Patterns in Clinical Notes. HISB (2012)
Siddhartha Jonnalagadda, Ryan Peeler, Philip Topham
Discovering opinion leaders for medical topics using news articles. J. Biomed. Semant. 3 (2012)
Hongfang Liu, Stephen T. Wu, Dingcheng Li, Siddhartha Jonnalagadda, Sunghwan Sohn, Kavishwar B. Wagholikar, Peter J. Haug, Stanley M. Huff, Christopher G. Chute
Towards a semantic lexicon for clinical natural language processing. AMIA (2012)
Siddhartha Jonnalagadda, Dingcheng Li, Sunghwan Sohn, Stephen Tze-Inn Wu, Kavishwar B. Wagholikar, Manabu Torii, Hongfang Liu
Coreference analysis in clinical notes: a multi-pass sieve with alternate anaphora resolution modules. J. Am. Medical Informatics Assoc. 19 (5) (2012)
Stephen T. Wu, Young J. Juhn, Sunghwan Sohn, Ravikumar Komandur Elayavilli, Kavishwar B. Wagholikar, Siddhartha Jonnalagadda, Hongfang Liu
Asthma Status Identification with Natural Language Processing. AMIA (2012)
Siddhartha Jonnalagadda, Guilherme Del Fiol, Richard Medlin, Charlene R. Weir, Marcelo Fiszman, Javed Mostafa, Hongfang Liu
Automatically Extracting Sentences from Medline Citations to Support Clinicians' Information Needs. HISB (2012)
Siddhartha Jonnalagadda, Graciela Gonzalez
BioSimplify: an open source sentence simplification engine to improve recall in automatic biomedical information extraction CoRR (2011)
Siddhartha Jonnalagadda, Philip Topham
NEMO: Extraction and normalization of organization names from PubMed affiliation strings CoRR (2011)
Ehsan Emadzadeh, Siddhartha Jonnalagadda, Graciela Gonzalez
Evaluating Distributional Semantic and Feature Selection for Extracting Relationships from Biological Text. ICMLA (2) (2011)
Jörg Hakenberg, Robert Leaman, Nguyen Ha Vo, Siddhartha Jonnalagadda, Ryan Sullivan, Christopher Miller, Luis Tari, Chitta Baral, Graciela Gonzalez
Efficient Extraction of Protein-Protein Interactions from Full-Text Articles. IEEE ACM Trans. Comput. Biol. Bioinform. 7 (3) (2010)
Siddhartha Jonnalagadda, Robert Leaman, Trevor Cohen, Graciela Gonzalez
A Distributional Semantics Approach to Simultaneous Recognition of Multiple Classes of Named Entities. CICLing (2010)
Siddhartha Jonnalagadda, Graciela Gonzalez
Sentence Simplification Aids Protein-Protein Interaction Extraction CoRR (2010)
Siddhartha Jonnalagadda, Luis Tari, Jörg Hakenberg, Chitta Baral, Graciela Gonzalez
Towards Effective Sentence Simplification for Automatic Processing of Biomedical Text CoRR (2010)
Siddhartha Jonnalagadda, Luis Tari, Jörg Hakenberg, Chitta Baral, Graciela Gonzalez
Towards Effective Sentence Simplification for Automatic Processing of Biomedical Text. HLT-NAACL (Short Papers) (2009)

Siddhartha Jonnalagadda.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

Siddhartha Jonnalagadda