J. Biomed. Semant.

Keyphrases

Publications

volume 15, number 1, 2024

Jianfu Li, Yiming Li, Yuanyi Pan, Jinjing Guo, Zenan Sun, Fang Li, Yongqun He, Cui Tao
Mapping vaccine names in clinical trials to vaccine ontology using cascaded fine-tuned domain-specific language models. J. Biomed. Semant. 15 (1) (2024)
Adrien Bibal, Nourah M. Salem, Rémi Cardon, Elizabeth K. White, Daniel E. Acuna, Robin Burke, Lawrence E. Hunter
RecSOI: recommending research directions using statements of ignorance. J. Biomed. Semant. 15 (1) (2024)
Christian Witte, David M. Schmidt, Philipp Cimiano
Comparing generative and extractive approaches to information extraction from abstracts describing randomized clinical trials. J. Biomed. Semant. 15 (1) (2024)
Sarah Mullin, Robert A. McDougal, Kei-Hoi Cheung, Halil Kilicoglu, Amanda Beck, Caroline J. Zeiss
Chemical entity normalization for successful translational development of Alzheimer's disease and dementia therapeutics. J. Biomed. Semant. 15 (1) (2024)
Abdullateef I. Almudaifer, Whitney L. Covington, JaMor Hairston, Zachary Deitch, Ankit Anand, Caleb M. Carroll, Estera Crisan, William Bradford, Lauren Walter, Ellen F. Eaton, Sue S. Feldman, John D. Osborne
Multi-task transfer learning for the prediction of entity modifiers in clinical text: application to opioid use disorder case detection. J. Biomed. Semant. 15 (1) (2024)
Guglielmo Faggioli, Laura Menotti, Stefano Marchesin, Adriano Chiò, Arianna Dagliati, Mamede de Carvalho, Marta Gromicho, Umberto Manera, Eleonora Tavazzi, Giorgio Maria Di Nunzio, Gianmaria Silvello, Nicola Ferro
An extensible and unifying approach to retrospective clinical data modeling: the BrainTeaser Ontology. J. Biomed. Semant. 15 (1) (2024)
William D. Duncan, Matthew Diller, Damion M. Dooley, William R. Hogan, John Beverley
Concretizing plan specifications as realizables within the OBO foundry. J. Biomed. Semant. 15 (1) (2024)
Benjamin Molinet, Santiago Marro, Elena Cabrio, Serena Villata
Explanatory argumentation in natural language for correct and incorrect medical diagnoses. J. Biomed. Semant. 15 (1) (2024)
Rashmie Abeysinghe, Fengbo Zheng, Jay Shi, Samden D. Lhatoo, Licong Cui
Leveraging logical definitions and lexical features to detect missing IS-A relations in biomedical terminologies. J. Biomed. Semant. 15 (1) (2024)
Mathias De Brouwer, Pieter Bonte, Dörthe Arndt, Miel Vander Sande, Anastasia Dimou, Ruben Verborgh, Filip De Turck, Femke Ongenae
Optimized continuous homecare provisioning through distributed data-driven semantic services and cross-organizational workflows. J. Biomed. Semant. 15 (1) (2024)
Jie Zheng, Xingxian Li, Anna Maria Masci, Hayleigh Kahn, Anthony Huffman, Eliyas Asfaw, Yuanyi Pan, Jinjing Guo, Virginia He, Justin Song, Andrey I. Seleznev, Asiyah Yu Lin, Yongqun He
Empowering standardization of cancer vaccines through ontology: enhanced modeling and data analysis. J. Biomed. Semant. 15 (1) (2024)
Daniel N. Sosa, Georgiana Neculae, Julien Fauqueur, Russ B. Altman
Elucidating the semantics-topology trade-off for knowledge inference-based pharmacological discovery. J. Biomed. Semant. 15 (1) (2024)
Rabia Azzi, Georgeta Bordea, Romain Griffier, Jean Noël Nikiema, Fleur Mougin
Enriching the FIDEO ontology with food-drug interactions from online knowledge sources. J. Biomed. Semant. 15 (1) (2024)
Lars Vogt, Tobias Kuhn, Robert Hoehndorf
Semantic units: organizing knowledge graphs into semantically meaningful units of representation. J. Biomed. Semant. 15 (1) (2024)
Anthony Huffman, Xumeng Zhang, Meghana Lanka, Jie Zheng, Anna Maria Masci, Yongqun He
Ontological representation, modeling, and analysis of parasite vaccines. J. Biomed. Semant. 15 (1) (2024)
Lars Vogt, Tobias Kuhn, Robert Hoehndorf
Correction to: Semantic units: organizing knowledge graphs into semantically meaningful units of representation. J. Biomed. Semant. 15 (1) (2024)

volume 14, number 1, 2023

volume 13, number 1, 2022