Olivier Dameron

Publication Activity (10 Years)

Years Active: 2001-2024
Publications (10 Years): 11

Top Topics

Using Semantic Web Technologies

Top Venues

PLoS Comput. Biol.

Publications

Marine Louarn, Guillaume Collet, Ève Barré, Thierry Fest, Olivier Dameron, Anne Siegel, Fabrice Chatonnet
Regulus infers signed regulatory relations from few samples' information using discretization and likelihood constraints. PLoS Comput. Biol. 20 (1) (2024)
Camille Juigné, Olivier Dameron, François Moreews, Florence Gondret, Emmanuelle Becker
Fixing molecular complexes in BioPAX standards to enrich interactions and detect redundancies using semantic web technologies. Bioinform. 39 (5) (2023)
Marine Louarn, Fabrice Chatonnet, Xavier Garnier, Thierry Fest, Anne Siegel, Catherine Faron, Olivier Dameron
Improving reusability along the data life cycle: a regulatory circuits case study. J. Biomed. Semant. 13 (1) (2022)
Marc Melkonian, Camille Juigné, Olivier Dameron, Gwenaël Rabut, Emmanuelle Becker
Towards a reproducible interactome: semantic-based detection of redundancies to unify protein-protein interaction databases. Bioinform. 38 (6) (2022)
Johanne Bakalara, Thomas Guyet, Olivier Dameron, André Happe, Emmanuel Oger
An Extension of Chronicles Temporal Model with Taxonomies: Application to Epidemiological Studies. HEALTHINF (2021)
Marine Louarn, Fabrice Chatonnet, Xavier Garnier, Thierry Fest, Anne Siegel, Olivier Dameron
Increasing Life Science Resources Re-Usability using Semantic Web Technologies. eScience (2019)
Yann Rivault, Olivier Dameron, Nolwenn Le Meur
queryMed: Semantic Web functions for linking pharmacological and medical knowledge to data. Bioinform. 35 (17) (2019)
Vincent Henry, Ivan Moszer, Olivier Dameron, Marie-Claude Potier, Martin Hofmann-Apitius, Olivier Colliot
Converting Alzheimer's Disease Map into a Heavyweight Ontology: A Formal Network to Integrate Data. DILS (2018)
Méziane Aite, Marie Chevallier, Clémence Frioux, Camille Trottier, Jeanne Got, María Paz Cortés, Sebastián N. Mendoza, Grégory Carrier, Olivier Dameron, Nicolas Guillaudeux, Mauricio Latorre, Nicolás Loira, Gabriel V. Markov, Alejandro Maass, Anne Siegel
Traceability, reproducibility and wiki-exploration for "à-la-carte" reconstructions of genome-scale metabolic models. PLoS Comput. Biol. 14 (5) (2018)
Yann Rivault, Nolwenn Le Meur, Olivier Dameron
A Similarity Measure Based on Care Trajectories as Sequences of Sets. AIME (2017)
Jean Coquet, Nathalie Théret, Vincent Legagneux, Olivier Dameron
Identifying Functional Families of Trajectories in Biological Pathways by Soft Clustering: Application to TGF-β Signaling. CMSB (2017)
Andrej Machno, Pierre Jannin, Olivier Dameron, Werner Korb, Gerik Scheuermann, Jürgen Meixensberger
Ontology for assessment studies of human-computer-interaction in surgery. Artif. Intell. Medicine 63 (2) (2015)
Gautier Defossez, Alexandre Rollet, Olivier Dameron, Pierre Ingrand
Temporal representation of care trajectories of cancer patients using data from a regional information system: an application in breast cancer. BMC Medical Informatics Decis. Mak. 14 (2014)
Olivier Dameron, Paolo Besana, Oussama Zekri, Annabel Bourde, Anita Burgun, Marc Cuggia
OWL model of clinical trial eligibility criteria compatible with partially-known information. J. Biomed. Semant. 4 (2013)
Jean-François Ethier, Olivier Dameron, Vasa Curcin, Mark M. McGilchrist, Robert A. Verheij, Theodoros N. Arvanitis, Adel Taweel, Brendan Delaney, Anita Burgun
A unified structural/terminological interoperability framework based on LexEVS: application to TRANSFoRm. J. Am. Medical Informatics Assoc. 20 (5) (2013)
Charles Bettembourg, Christian Diot, Anita Burgun, Olivier Dameron
GO2PUB: Querying PubMed with semantic expansion of gene ontology terms. J. Biomed. Semant. 3 (2012)
Olivier Dameron, Paolo Besana, Oussama Zekri, Annabel Bourde, Anita Burgun, Marc Cuggia
OWL Model of Clinical Trial Eligibility Criteria Compatible with Partially-known Information. SWAT4LS (2012)
Pascal Van Hille, Julie Jacques, Julien Taillard, Arnaud Rosier, David Delerue, Anita Burgun, Olivier Dameron
Comparing Drools and ontology reasoning approaches for telecardiology decision support. MIE (2012)
Wiktoria Golik, Olivier Dameron, Jérôme Bugeon, Alice Fatet, Isabelle Hue, Catherine Hurtaud, Matthieu Reichstadt, Marie-Christine Salaün, Jean Vernet, Léa Joret, Frédéric Papazian, Claire Nedellec, Pierre-Yves Le Bail
ATOL: The Multi-species Livestock Trait Ontology. MTSR (2012)
Lynda Temal, Arnaud Rosier, Olivier Dameron, Anita Burgun
Mapping BFO and DOLCE. MedInfo (2010)
Nicolas Lebreton, Christophe Blanchet, Daniela Barreiro Claro, Julie Chabalier, Anita Burgun, Olivier Dameron
Verification of parameters semantic compatibility for semi-automatic web service composition: a generic case study. iiWAS (2010)
Amrapali Zaveri, Luciana Cofiel, Jatin Shah, Shreyasee S. Pradhan, Edwin Chan, Olivier Dameron, Ricardo Pietrobon, Beng Ti Ang
Achieving High Research Reporting Quality Through the Use of Computational Ontologies. Neuroinformatics 8 (4) (2010)
Cyril Grouin, Arnaud Rosier, Olivier Dameron, Pierre Zweigenbaum
Testing Tactics to Localize De-Identification. MIE (2009)
Elena Beisswanger, Vivian Lee, Jung-jae Kim, Dietrich Rebholz-Schuhmann, Andrea Splendiani, Olivier Dameron, Stefan Schulz, Udo Hahn
Gene Regulation Ontology (GRO): Design Principles and Use Cases. MIE (2008)
Olivier Dameron, Julie Chabalier
Bio-ontologies Tutorial. DILS (2008)
Gwenaëlle Marquet, Olivier Dameron, Stephan Saikali, Jean Mosser, Anita Burgun
Grading glioma tumors using OWL-DL and NCI Thesaurus. AMIA (2007)
Olivier Dameron, Mark A. Musen, Bernard Gibaud
Using semantic dependencies for consistency management of an ontology of brain-cortex anatomy. Artif. Intell. Medicine 39 (3) (2007)
Daniel L. Rubin, Olivier Dameron, Yasser Bashir, David Grossman, Parvati Dev, Mark A. Musen
Using ontologies linked with geometric models to reason about penetrating injuries. Artif. Intell. Medicine 37 (3) (2006)
Christine Golbreich, Olivier Bierlaire, Olivier Dameron, Bernard Gibaud
Use Case: Ontology with Rules for identifying brain anatomical structures. Rule Languages for Interoperability (2005)
Daniel L. Rubin, Holger Knublauch, Ray W. Fergerson, Olivier Dameron, Mark A. Musen
Protégé-OWL: Creating Ontology-Driven Reasoning Applications with the Web Ontology Language. AMIA (2005)
Olivier Dameron, Daniel L. Rubin, Mark A. Musen
Challenges in Converting Frame-Based Ontology into OWL: the Foundational Model of Anatomy Case-Study. AMIA (2005)
Daniel L. Rubin, Olivier Dameron, Mark A. Musen
Use of Description Logic Classification to Reason about Consequences of Penetrating Injuries. AMIA (2005)
Olivier Dameron, Bernard Gibaud, Mark A. Musen
Using semantic dependencies for consistency management of an ontology of brain-cortex anatomy. KR-MED (2004)
Holger Knublauch, Olivier Dameron, Mark A. Musen
Weaving the biomedical Semantic Web with the Prote'ge' OWL Plugin. KR-MED (2004)
Olivier Dameron, Natalya Fridman Noy, Holger Knublauch, Mark A. Musen
Accessing and Manipulating Ontologies Using Web Services. SWS@ISWC (2004)
Christine Golbreich, Olivier Dameron, Bernard Gibaud, Anita Burgun
How to Represent Medical Ontologies in View of a Semantic Web? AIME (2003)
Christine Golbreich, Olivier Dameron, Bernard Gibaud, Anita Burgun
Web Ontology Language Requirements w.r.t Expressiveness of Taxonomy and Axioms in Medicine. ISWC (2003)
Bernard Gibaud, Olivier Dameron, Xavier Morandi
Re-use of a multi-purpose knowledge corpus on cortex anatomy for educational purposes. MIE (2003)
Olivier Dameron, Anita Burgun, Xavier Morandi, Bernard Gibaud
Modelling dependencies between relations to ensure consistency of a cerebral cortex anatomy knowledge base. MIE (2003)
Olivier Dameron, Bernard Gibaud, Anita Burgun, Xavier Morandi
Towards a sharable numeric and symbolic knowledge base on cerebral cortex anatomy: lessons learned from a prototype. AMIA (2002)
Olivier Dameron, Bernard Gibaud, Xavier Morandi
Numeric and Symbolic Knowledge Representation of Cortex Anatomy Using Web Technologies. AIME (2001)
Bernard Gibaud, Olivier Dameron, Xavier Morandi
Representing and sharing numeric and symbolic knowledge of brain cortex anatomy using web technology. CARS (2001)