Jung-jae Kim

Publication Activity (10 Years)

Years Active: 2000-2022
Publications (10 Years): 8

Top Topics

Annotated Corpus

Named Entity Recognition

Medline Abstracts

Gene Regulation

Top Venues

BioNLP@ACL (Shared Task)

J. Biomed. Semant.

Publications

Chen Tao, Jung-jae Kim
taochen at SemEval-2022 Task 5: Multimodal Multitask Learning and Ensemble Learning. SemEval@NAACL (2022)
Jeongkyun Kim, Jung-jae Kim, Hyunju Lee
DigChem: Identification of disease-gene-chemical relationships from Medline abstracts. PLoS Comput. Biol. 15 (5) (2019)
Ali Zonoozi, Jung-jae Kim, Xiao-Li Li, Gao Cong
Periodic-CRN: A Convolutional Recurrent Model for Crowd Density Prediction with Recurring Periodic Patterns. IJCAI (2018)
Jung-jae Kim, Yong Liu, Wee-Yong Lim, Vrizlynn L. L. Thing
An Empirical Study on Collective Online Behaviors of Extremist Supporters. ADMA (2017)
Muhammad Tahir Khan, Yukun Ma, Jung-jae Kim
Term Ranker: A Graph-Based Re-Ranking Approach. FLAIRS Conference (2016)
Xu Han, Chee Keong Kwoh, Jung-jae Kim
Clustering based active learning for biomedical Named Entity Recognition. IJCNN (2016)
Xu Han, Jung-jae Kim, Chee Keong Kwoh
Active learning for ontological event extraction incorporating named entity recognition and unknown word handling. J. Biomed. Semant. 7 (2016)
Yukun Ma, Jung-jae Kim, Benjamin Bigot, Muhammad Tahir Khan
Feature-enriched word embeddings for named entity recognition in open-domain conversations. ICASSP (2016)
Jin-Dong Kim, Jung-jae Kim, Xu Han, Dietrich Rebholz-Schuhmann
Extending the evaluation of Genia Event task toward knowledge base construction and comparison to Gene Regulation Ontology task. BMC Bioinform. 16 (S10) (2015)
Jeongkyun Kim, Seongeun So, Hee-Jin Lee, Jong C. Park, Jung-jae Kim, Hyunju Lee
DigSee: disease gene search engine with evidence sentences (version cancer). Nucleic Acids Res. 41 (Webserver-Issue) (2013)
Jung-jae Kim, Xu Han, Vivian Lee, Dietrich Rebholz-Schuhmann
GRO Task: Populating the Gene Regulation Ontology with events and relations. BioNLP@ACL (Shared Task) (2013)
Jung-jae Kim, Dietrich Rebholz-Schuhmann
Improving the extraction of complex regulatory events from scientific text by using ontology-based inference. J. Biomed. Semant. 2 (S-5) (2011)
Jung-jae Kim, Dietrich Rebholz-Schuhmann
Improving the extraction of complex regulatory events from scientific text by using ontology-based inference. Semantic Mining in Biomedicine (2010)
Udo Hahn, Katrin Tomanek, Ekaterina Buyko, Jung-jae Kim, Dietrich Rebholz-Schuhmann
How Feasible and Robust is the Automatic Extraction of Gene Regulation Events? A Cross-Method Evaluation under Lab and Real-Life Conditions. BioNLP@HLT-NAACL (2009)
Elena Beisswanger, Vivian Lee, Jung-jae Kim, Dietrich Rebholz-Schuhmann, Andrea Splendiani, Olivier Dameron, Stefan Schulz, Udo Hahn
Gene Regulation Ontology (GRO): Design Principles and Use Cases. MIE (2008)
Jung-jae Kim, Dietrich Rebholz-Schuhmann
Categorization of services for seeking information in biomedical literature: a typology for improvement of practice. Briefings Bioinform. 9 (6) (2008)
Jung-jae Kim, Piotr Pezik, Dietrich Rebholz-Schuhmann
MedEvi: Retrieving textual evidence of relations between biomedical concepts from Medline. Bioinform. 24 (11) (2008)
Jung-jae Kim, Jong C. Park
Extracting contrastive information from negation patterns in biomedical literature. ACM Trans. Asian Lang. Inf. Process. 5 (1) (2006)
Jung-jae Kim, Zhuo Zhang, Jong C. Park, See-Kiong Ng
BioContrasts: extracting and exploiting protein-protein contrastive relations from biomedical literature. Bioinform. 22 (5) (2006)
Jin-Bok Lee, Jung-jae Kim, Jong C. Park
Automatic extension of Gene Ontology with flexible identification of candidate terms. Bioinform. 22 (6) (2006)
Young-Man Choi, Jaehwa Jeong, Dae-Gab Gweon, Jung-jae Kim
A new damping scheduling proximate time optimal servomechanism. ACC (2006)
Jung-jae Kim, Jong C. Park
Annotation of Gene Products in the Literature with Gene Ontology Terms Using Syntactic Dependencies. IJCNLP (2004)
Jung-jae Kim, Jong C. Park
Bioie: Retargetable Information Extraction and Ontological Annotation of Biological Interactions from the Literature. J. Bioinform. Comput. Biol. 2 (3) (2004)
Jong C. Park, Hyun Sook Kim, Jung-jae Kim
Bidirectional Incremental Parsing for Automatic Pathway Identification with Combinatory Categorial Grammar. Pacific Symposium on Biocomputing (2001)
Jung-jae Kim, Key-Sun Choi, Young-Soog Chae
Phrase-Pattern-based Korean to English Machine Translation using Two Level Translation Pattern Selection. ACL (2000)