Nathalie Théret

Publication Activity (10 Years)

Years Active: 2007-2023
Publications (10 Years): 9

Top Topics

Protein Interaction

Tandem Mass Spectrometry

Biological Pathways

Soft Clustering

Top Venues

PLoS Comput. Biol.

Publications

Olivier Dennler, François Coste, Samuel Blanquart, Catherine Belleannée, Nathalie Théret
Phylogenetic inference of the emergence of sequence modules and protein-protein interactions in the ADAMTS-TSL family. PLoS Comput. Biol. 19 (8) (2023)
Pierre Vignet, Jean Coquet, Sébastien Auber, Matéo Boudet, Anne Siegel, Nathalie Théret
Discrete modeling for integration and analysis of large-scale signaling networks. PLoS Comput. Biol. 18 (6) (2022)
Maël Conan, Nathalie Théret, Sophie Langouet, Anne Siegel
Constructing xenobiotic maps of metabolism to predict enzymes catalyzing metabolites capable of binding to DNA. BMC Bioinform. (3) (2021)
Maxime Folschette, Vincent Legagneux, Arnaud Poret, Lokmane Chebouba, Carito Guziolowski, Nathalie Théret
A pipeline to create predictive functional networks: application to the tumor progression of hepatocellular carcinoma. BMC Bioinform. 21 (1) (2020)
Pierre Boutillier, Ferdinanda Camporesi, Jean Coquet, Jérôme Feret, Kim Quyên Lý, Nathalie Théret, Pierre Vignet
KaSa: A Static Analyzer for Kappa. CMSB (2018)
Jean Coquet, Nathalie Théret, Vincent Legagneux, Olivier Dameron
Identifying Functional Families of Trajectories in Biological Pathways by Soft Clustering: Application to TGF-β Signaling. CMSB (2017)
Marie-Amandine Laurent, Dominique Bonnier, Nathalie Théret, Pierre Tufféry, Gautier Moroy
In silico characterization of the interaction between LSKL peptide, a LAP-TGF-beta derived peptide, and ADAMTS1. Comput. Biol. Chem. 61 (2016)
Satya Swarup Samal, Aurélien Naldi, Dima Grigoriev, Andreas Weber, Nathalie Théret, Ovidiu Radulescu
Geometric analysis of pathways dynamics: Application to versatility of TGF-β receptors. Biosyst. 149 (2016)
Loïc Paulevé, Nathalie Théret
Preface. Electron. Notes Theor. Comput. Sci. 326 (2016)
Geoffroy Andrieux, Michel Le Borgne, Nathalie Théret
An integrative modeling framework reveals plasticity of TGF-β signaling. BMC Syst. Biol. 8 (2014)
Jeremy Gruel, Michel Le Borgne, Nolwenn LeMeur, Nathalie Théret
Simple Shared Motifs (SSM) in conserved region of promoters: a new approach to identify co-regulation patterns. BMC Bioinform. 12 (2011)
Antony Le Béchec, Pierre-Joachim Zindy, Thomas Sierocinski, Dimitri Petritis, Audrey Bihouée, Nolwenn LeMeur, Jean Léger, Nathalie Théret
M@IA: A Modular Open-Source Application for Microarray Workflow and Integrative Datamining. Silico Biol. 8 (1) (2008)
Thomas Sierocinski, Antony Le Béchec, Nathalie Théret, Dimitri Petritis
Semantic distillation: a method for clustering objects by their contextual specificity CoRR (2007)