John D. Osborne

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 10

Top Topics

Named Entity Disambiguation

Transfer Learning

Language Processing

Top Venues

J. Biomed. Semant.

Publications

Abdullateef I. Almudaifer, Whitney L. Covington, JaMor Hairston, Zachary Deitch, Ankit Anand, Caleb M. Carroll, Estera Crisan, William Bradford, Lauren Walter, Ellen F. Eaton, Sue S. Feldman, John D. Osborne
Multi-task transfer learning for the prediction of entity modifiers in clinical text: application to opioid use disorder case detection. J. Biomed. Semant. 15 (1) (2024)
Abdullateef I. Almudaifer, Tobias O'Leary, Whitney L. Covington, JaMor Hairston, Zachary Deitch, Ankit Anand, Caleb M. Carroll, Estera Crisan, William Bradford, Lauren Walter, Eaton F. Ellen, Sue S. Feldman, John D. Osborne
Transfer Learning for the Prediction of Entity Modifiers in Clinical Text: Application to Opioid Use Disorder Case Detection. CoRR (2024)
Abdullateef I. Almudaifer, Sue S. Feldman, Tobias O'Leary, Whitney L. Covington, JaMor Hairston, Zachary Deitch, Estera Crisan, Kevin Riggs, Lauren Walter, John D. Osborne
Annotation of Opioid Use Disorder Entity Modifiers in Clinical Text. MedInfo (2023)
Sijia Liu, Andrew Wen, Liwei Wang, Huan He, Sunyang Fu, Robert T. Miller, Andrew E. Williams, Daniel R. Harris, Ramakanth Kavuluru, Mei Liu, Noor Abu-El-Rub, Dalton Schutte, Rui Zhang, Masoud Rouhizadeh, John D. Osborne, Yongqun He, Umit Topaloglu, Stephanie S. Hong, Joel H. Saltz, Thomas Schaffter, Emily R. Pfaff, Christopher G. Chute, Tim Duong, Melissa A. Haendel, Rafael Fuentes, Peter Szolovits, Hua Xu, Hongfang Liu
An open natural language processing (NLP) framework for EHR-based clinical research: a case demonstration using the National COVID Cohort Collaborative (N3C). J. Am. Medical Informatics Assoc. 30 (12) (2023)
John D. Osborne, Tobias O'Leary, Akhil Nadimpalli, Salma M. Aly, Richard E. Kennedy
BRATsynthetic: Text De-identification using a Markov Chain Replacement Strategy for Surrogate Personal Identifying Information. CoRR (2022)
John D. Osborne, Tobias O'Leary, Abdullateef I. Almudaifer, Whitney L. Covington, Caleb M. Carroll, Ellen F. Eaton, Rachel A. Lee, Sue Feldman, Lauren Walter
Towards Identification of Opiate Use Disorder in Clinical Text. AMIA (2021)
Sijia Liu, Andrew Wen, Liwei Wang, Huan He, Sunyang Fu, Robert T. Miller, Andrew E. Williams, Daniel R. Harris, Ramakanth Kavuluru, Mei Liu, Noor Abu-El-Rub, Rui Zhang, John D. Osborne, Masoud Rouhizadeh, Yongqun He, Emily R. Pfaff, Christopher G. Chute, Tim Duong, Melissa A. Haendel, Rafael Fuentes, Peter Szolovits, Hua Xu, Hongfang Liu
An Open Natural Language Processing Development Framework for EHR-based Clinical Research: A case demonstration using the National COVID Cohort Collaborative (N3C). CoRR (2021)
John D. Osborne, Tobias O'Leary, James Del Monte, Kuleen Sasse
Identification of Cancer Entities in Clinical Text Combining Transformers with Dictionary Features. IberLEF@SEPLN (2020)
John D. Osborne, James S. Booth, Tobias O'Leary, Amy Mudano, Giovanna Rosas, Phillip Foster, Kenneth Saag, Maria I. Danila
Identification of Gout Flares in Chief Complaint Text Using Natural Language Processing. AMIA (2020)
Amy Y. Wang, John D. Osborne, Maria I. Danila, Andrew Naidech, David M. Liebovitz
AllergyMap: An Open Source Corpus of Allergy Mention Normalizations. AMIA (2020)