IEEE ACM Trans. Comput. Biol. Bioinform.

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Publications

volume 21, number 1, 2024

Chao Tu, Denghui Du, Tieyong Zeng, Yu Zhang
Deep Multi-Dictionary Learning for Survival Prediction With Multi-Zoom Histopathological Whole Slide Images. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Yuerui Liu, Yongquan Jiang, Fan Zhang, Yan Yang
A Novel Multi-Scale Graph Neural Network for Metabolic Pathway Prediction. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Dandan Li, Zhen Xiao, Han Sun, Xingpeng Jiang, Weizhong Zhao, Xianjun Shen
Prediction of Drug-Disease Associations Based on Multi-Kernel Deep Learning Method in Heterogeneous Graph Embedding. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Shujie Dong, Yuansheng Liu, Yongshun Gong, Xiangjun Dong, Xiangxiang Zeng
scCAN: Clustering With Adaptive Neighbor-Based Imputation Method for Single-Cell RNA-Seq Data. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Shengpeng Yu, Hong Wang, Jing Li, Jun Zhao, Cheng Liang, Yanshen Sun
A Multi-Relational Graph Encoder Network for Fine-Grained Prediction of MiRNA-Disease Associations. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Wenliang Tang, Zhaohong Deng, Hanwen Zhou, Wei Zhang, Fuping Hu, Kup-Sze Choi, Shitong Wang
MVDINET: A Novel Multi-Level Enzyme Function Predictor With Multi-View Deep Interactive Learning. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Junchang Xin, Mingcan Wang, Luxuan Qu, Qi Chen, Weiyiqi Wang, Zhiqiong Wang
BIC-LP: A Hybrid Higher-Order Dynamic Bayesian Network Score Function for Gene Regulatory Network Reconstruction. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Souradipto Choudhuri, Keya Sau
CodonU: A Python Package for Codon Usage Analysis. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Rui Guo, Xu Tian, Hanhe Lin, Stephen J. McKenna, Hong-Dong Li, Fei Guo, Jin Liu
Graph-Based Fusion of Imaging, Genetic and Clinical Data for Degenerative Disease Diagnosis. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Pengcheng Zeng, Zhixiang Lin
scICML: Information-Theoretic Co-Clustering-Based Multi-View Learning for the Integrative Analysis of Single-Cell Multi-Omics Data. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Jordan Morris, Ashur Rafiev, Graeme M. Bragg, Mark L. Vousden, David B. Thomas, Alex Yakovlev, Andrew D. Brown
An Event-Driven Approach to Genotype Imputation on a Custom RISC-V Cluster. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Bindi M. Nagda, Van Minh Nguyen, Ryan T. White
promSEMBLE: Hard Pattern Mining and Ensemble Learning for Detecting DNA Promoter Sequences. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Nicolò Rossi, Nicola Gigante, Nicola Vitacolonna, Carla Piazza
Inferring Markov Chains to Describe Convergent Tumor Evolution With CIMICE. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Yamane El-Zein, Mathieu Lemay, Kévin Huguenin
PrivaTree: Collaborative Privacy-Preserving Training of Decision Trees on Biomedical Data. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Wei Wang, MengXue Yu, Bin Sun, Juntao Li, Dong Liu, Hongjun Zhang, Xianfang Wang, Yun Zhou
SMGCN: Multiple Similarity and Multiple Kernel Fusion Based Graph Convolutional Neural Network for Drug-Target Interactions Prediction. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Jonas Kristiansen Nøland, Steinar Thorvaldsen
The Exact Stochastic Process of the Haploid Multi-Allelic Wright-Fisher Mutation Model. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Eric J. Barnett, Daniel G. Onete, Asif Salekin, Stephen V. Faraone
Genomic Machine Learning Meta-regression: Insights on Associations of Study Features With Reported Model Performance. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Rituparna Sinha, Rajat Kumar Pal, Rajat K. De
ENLIGHTENMENT: A Scalable Annotated Database of Genomics and NGS-Based Nucleotide Level Profiles. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Changyong Yu, Yuhai Zhao, Chu Zhao, Jianyu Jin, Keming Mao, Guoren Wang
MiniDBG: A Novel and Minimal De Bruijn Graph for Read Mapping. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)

volume 20, number 6, 2023