Xianjun Shen

Publication Activity (10 Years)

Years Active: 2002-2024
Publications (10 Years): 32

Top Topics

Decision Tree Algorithm

Graph Embedding

Protein Complexes

Top Venues

Int. J. Data Min. Bioinform.

计算机科学

Publications

Xinzi Chen, Pei Li, Weizhong Zhao, Xingpeng Jiang, Xianjun Shen
A Novel Combined Embedding Model Based on Heterogeneous Network for Inferring Microbe-Metabolite Interactions. ISBRA (1) (2024)
Dandan Li, Zhen Xiao, Han Sun, Xingpeng Jiang, Weizhong Zhao, Xianjun Shen
Prediction of Drug-Disease Associations Based on Multi-Kernel Deep Learning Method in Heterogeneous Graph Embedding. IEEE ACM Trans. Comput. Biol. Bioinform. 21 (1) (2024)
Weizhong Zhao, Xueling Yuan, Xianjun Shen, Xingpeng Jiang, Chuan Shi, Tingting He, Xiaohua Hu
Improving drug-drug interactions prediction with interpretability via meta-path-based information fusion. Briefings Bioinform. 24 (2) (2023)
Ruizhe Zhang, Dandan Li, Ying Xiao, Weizhong Zhao, Xingpeng Jiang, Xianjun Shen
An Effective Microbial-drug Relation Extraction Model Based on Dual Graph Convolutional Networks. BIBM (2023)
Wenjie Yao, Weizhong Zhao, Xiaowei Xu, Xingpeng Jiang, Xianjun Shen, Tingting He
Counterfactual Inference-based Data Augmentation for Drug-side effect Associations Prediction. BIBM (2023)
Shengwei Ye, Weizhong Zhao, Xiaowei Xu, Xianjun Shen, Xingpeng Jiang, Tingting He
Effective Drug Repositioning with a Novel Negative Sample Selection Algorithm. BIBM (2023)
Yue Wang, Han Sun, Haodong Wang, Dandan Li, Weizhong Zhao, Xingpeng Jiang, Xianjun Shen
An Effective Model for Predicting Phage-Host Interactions Via Graph Embedding Representation Learning With Multi-Head Attention Mechanism. IEEE J. Biomed. Health Informatics 27 (6) (2023)
Pei Li, Ying Xiao, Weizhong Zhao, Xingpeng Jiang, Xianjun Shen
Inferring microbe-metabolite interactions by heterogeneous network fusion based on graph convolution network. BIBM (2022)
Wenjie Yao, Weizhong Zhao, Xingpeng Jiang, Xianjun Shen, Tingting He
MPGNN-DSA: A Meta-path-based Graph Neural Network for drug-side effect association prediction. BIBM (2022)
Xueling Yuan, Weizhong Zhao, Xianjun Shen, Xingpeng Jiang, Tingting He
Prediction of Drug-Drug Interactions Based on Meta-path-based Fusion Mechanism in Heterogeneous Information Network. BIBM (2022)
Haodong Wang, Han Sun, Yue Wang, Weizhong Zhao, Xingpeng Jiang, Xianjun Shen
Predicting human microbe-disease associations based on multi-source heterogeneous graph representation learning model. BIBM (2022)
Shengwei Ye, Weizhong Zhao, Xianjun Shen, Xingpeng Jiang, Tingting He
A Novel Drug Repositioning Model Based on Heterogeneous Graph Convolutional Network via Multi-task Learning. BIBM (2022)
Ruilong Xiang, Lingling Fu, Yue Wang, Han Sun, Xianjun Shen
A Simplex Hypergraph Clustering Method for Detecting Higher-order Modules in Microbial Network. BIBM (2021)
Xiangru Tang, Xianjun Shen, Yujie Wang, Yujuan Yang
Categorizing Offensive Language in Social Networks: A Chinese Corpus, Systems and an Explanation Tool. CNCL (2020)
Yujuan Yang, Xianjun Shen, Yujie Wang
BERT-BiLSTM-CRF for Chinese Sensitive Vocabulary Recognition. ISICA (2019)
Limin Yu, Xianjun Shen, Xingpeng Jiang, Jincai Yang, Yujuan Yang, Duo Zhong
Hypergraph Clustering Based on Intra-class Scatter Matrix for Mining Higher-order Microbial Module. BIBM (2019)
Jincai Yang, Lulu Yang, Yanyan Wang, Xianjun Shen
基于神经网络的关系词非充盈态复句层次的自动识别 (Hierarchy Division of Compound Sentence with Non-saturated Relation Word via Neural Network). 计算机科学 46 (11A) (2019)
Yujie Wang, Xianjun Shen, Yujuan Yang
The Classification of Chinese Sensitive Information Based on BERT-CNN. ISICA (2019)
Xianjun Shen, Xue Gong, Xingpeng Jiang, Jincai Yang, Tingting He, Xiaohua Hu
High-order Organization of Weighted Microbial Interaction Network. BIBM (2018)
Xianjun Shen, Huan Zhu, Xingpeng Jiang, Xiaohua Hu, Jincai Yang
A Novel Approach Based on Bi-Random Walk to Predict Microbe-Disease Associations. ICIC (3) (2018)
Xianchao Zhu, Xianjun Shen, Xingpeng Jiang, Kaiping Wei, Tingting He, Yuanyuan Ma, Jiaqi Liu, Xiaohua Hu
Nonlinear expression and visualization of nonmetric relationships in genetic diseases and microbiome data. BMC Bioinform. (20) (2018)
Jincai Yang, Chunjie Guo, Xingpeng Jiang, Xiaohua Hu, Xianjun Shen
Systematic characterization and prediction of tumor-associated genes in mouse using microrna. BIBM (2017)
Xianjun Shen, Xianchao Zhu, Xingpeng Jiang, Li Gao, Tingting He, Xiaohua Hu
Visualization of non-metric relationships by adaptive learning multiple maps t-SNE regularization. IEEE BigData (2017)
Xianjun Shen, Xianchao Zhu, Xingpeng Jiang, Tingting He, Xiaohua Hu
Visualization of disease relationships by multiple maps t-SNE regularization based on Nesterov accelerated gradient. BIBM (2017)
Jincai Yang, Zhongzhong Chen, Xianjun Shen, Jinzhu Hu
基于汉语复句的语义相关度计算及类别的标识 (Word Semantic Relevancy Computation and Categories Identification Based on Chinese Compound Sentences). 计算机科学 44 (5) (2017)
Jincai Yang, Huichao Gu, Xingpeng Jiang, Qingyang Huang, Xiaohua Hu, Xianjun Shen
Identifying the Risky SNP of Osteoporosis with ID3-PEP Decision Tree Algorithm. Complex. 2017 (2017)
Jincai Yang, Fuli Zhang, Xingpeng Jiang, Xianjun Shen, Xiaohua Hu
Classify and identify the risky loci of type 2 diabetes with computational method. BIBM (2017)
Tingting He, Peng Li, Xiaohua Hu, Xianjun Shen, Yan Wang, Junmin Zhao
A novel proteins complex identification based on connected affinity and multi-level seed extension. Int. J. Data Min. Bioinform. 14 (1) (2016)
Wenjie Hu, Yao Chen, Jincai Yang, Xianjun Shen
Mobile nodes localisation based on hill climbing optimisation. Int. J. Wirel. Mob. Comput. 11 (1) (2016)
Xianjun Shen, Jin Zhou, Xingpeng Jiang, Xiaohua Hu, Tingting He, Jincai Yang, Dan Xie
A novel identified temporal protein complexes strategy inspired by density-distance and brainstorming process. BIBM (2016)
Xianjun Shen, Yao Chen, Xingpeng Jiang, Xiaohua Hu, Tingting He, Jincai Yang
Predicting disease-microbe association by random walking on the heterogeneous network. BIBM (2016)
Jincai Yang, Huichao Gu, Xingpeng Jiang, Qingyang Huang, Xiaohua Hu, Xianjun Shen
Walking in the PPI network to identify the risky SNP of osteoporosis with decision tree algorithm. BIBM (2016)
Xianjun Shen, Yang Yi, Wenyong Dong, Shuaiyu Guo, Junyan Li, Fan Chen
Face detection based on particle swarm optimisation-free entropy minimisation. Int. J. Comput. Sci. Math. 6 (2) (2015)
Xianjun Shen, Yanli Zhao, Yanan Li, Yang Yi, Tingting He, Jincai Yang
An integrated approach to identify protein complex based on best neighbour and modularity increment. Int. J. Data Min. Bioinform. 11 (4) (2015)
Xianjun Shen, Li Yi, Yang Yi, Jincai Yang, Tingting He, Xiaohua Hu
Dynamic identifying protein functional modules based on adaptive density modularity in protein-protein interaction networks. BMC Bioinform. 16 (S12) (2015)
Wenjie Hu, Xianjun Shen, Rui Xu
Essential protein discovery based on network node correlation and invalidating protein node. BIBM (2015)
Jincai Yang, Kaikai Guo, Xianjun Shen, Jinzhu Hu
基于贝叶斯模型的复句关系词自动识别与规则挖掘 (Automatic Identification and Rule Mining for Relation Words of Chinese Compound Sentences Based on Bayesian Model). 计算机科学 42 (7) (2015)
Yan Wang, Tingting He, Xingpeng Jiang, Jie Yuan, Xianjun Shen
Weighted fusion regularisation and predicting microbial interactions with vector autoregressive model. Int. J. Data Min. Bioinform. 13 (4) (2015)
Xianjun Shen, Yi Li, Xingpeng Jiang, Yanli Zhao, Tingting He, Jincai Yang
Detecting temporal protein complexes based on Neighbor Closeness and time course protein interaction networks. BIBM (2015)
Yan Wang, Xingpeng Jiang, Xiaohua Hu, Tingting He, Xianjun Shen, Jie Yuan
Microbiome dynamics analysis using a novel multivariate vector autoregression model with weighted fusion regularization. BIBM (2014)
Xianjun Shen, Yanli Zhao, Yanan Li, Tingting He, Jincai Yang, Xiaohua Hu
An efficient protein complex mining algorithm based on Multistage Kernel Extension. BMC Bioinform. 15 (S-12) (2014)
Minghong Fang, Xiaohua Hu, Tingting He, Yan Wang, Junmin Zhao, Xianjun Shen, Jie Yuan
Prioritizing disease-causing genes based on network diffusion and rank concordance. BIBM (2014)
Junmin Zhao, Tingting He, Xiaohua Hu, Yan Wang, Xianjun Shen, Minghong Fang, Jie Yuan
A novel disease gene prediction method based on PPI network. BIBM (2014)
Xianjun Shen, Yang Yi, Yan Wang, Xiaohui Chen, Jincai Yang, Tingting He
A novel approach to breast cancer-related disease genes discovered through variation of density modularity. BIBM (2014)
Tingting He, Peng Li, Xiaohua Hu, Xianjun Shen, Yan Wang, Junmin Zhao
A novel proteins complex identification based on connected affinity and multi-level seed extension. BIBM (2014)
Xianjun Shen, Yanli Zhao, Yanan Li, Jincai Yang, Tingting He, Xiaohua Hu
An integrated approach to identify protein complex based on best neighbor and modularity increment. BIBM (2013)
Peng Li, Xiaohua Hu, Tingting He, Junmin Zhao, Ming Zhang, Xianjun Shen
Mining protein complexes based on connected affinity clique extension. BIBM (2013)
Junmin Zhao, Xiaohua Hu, Tingting He, Peng Li, Ming Zhang, Xianjun Shen
A novel protein complex identification algorithm based on gene co-expression (PCIA-GeCo). BIBM (2013)
Xianjun Shen, Rui Xu, Xiaohui Chen, Jincai Yang, Tingting He
Identification of essential proteins based on network capital assessment and invalidating protein node. BIBM (2013)
Xianjun Shen, Xiaohui Chen, Rui Xu, Tingting He, Jincai Yang, Xiaohua Hu
Protein functional module detection based on closely associated degree. BIBM (2013)
Xianjun Shen, Yanli Zhao, Yanan Li, Tingting He, Jincai Yang
An efficient protein complex mining algorithm based on multistage kernel extension. BIBM (2013)
Xianjun Shen, Yanan Li, Caixia Chen, Jincai Yang, Dabin Zhang
Greedy continuous particle swarm optimisation algorithm for the knapsack problems. Int. J. Comput. Appl. Technol. 44 (2) (2012)
Bojin Zheng, Jianmin Wang, Guisheng Chen, Jian Jiang, Xianjun Shen
Hidden Tree Structure is a Key to the Emergence of Scaling in the World Wide Web CoRR (2011)
Xianjun Shen, Fan Chen, Tingting He, Zhifeng Chi, Caixia Chen
A New Dynamical Particle Swarm Optimization Based on Principle Free Entropy Minimization. ICNC (5) (2009)
Kaiping Wei, Tao Zhang, Xianjun Shen, Jingnan Liu
An Improved Threshold Selection Algorithm Based on Particle Swarm Optimization for Image Segmentation. ICNC (5) (2007)
Xianjun Shen, Yuanxiang Li, Jincai Yang, Li Yu
A Heuristic Particle Swarm Optimization for Cutting Stock Problem Based on Cutting Pattern. International Conference on Computational Science (4) (2007)
Zhifeng Dai, Yuanxiang Li, Bojin Zheng, Xianjun Shen
A Distributed Coordination Framework for Adaptive Sensor Uncertainty Handling. International Conference on Computational Science (4) (2007)
Yuanxiang Li, Weiwu Wang, Xianjun Shen, Weiqin Ying, Bojin Zheng
Theory of Evolutionary Algorithm: A View from Thermodynamics. International Conference on Computational Science (4) (2007)
Xianjun Shen, Yuanxiang Li, Bojin Zheng, Zhifeng Dai
General Particle Swarm Optimization Based on Simulated Annealing for Multi-specification One-Dimensional Cutting Stock Problem. CIS (2006)
Binbin Zheng, Yuanxiang Li, Xianjun Shen, Bojin Zheng
A New Dynamic Particle Swarm Optimizer. SEAL (2006)
Xianjun Shen, Ronaldo Menezes, Hector Gutierrez
A Coordination Architecture for Distributed Autonomous Control Systems. PDPTA (2002)