Karamarie Fecho

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 13

Top Topics

Abstraction Layer

Software Application

Top Venues

BMC Medical Informatics Decis. Mak.

J. Chem. Inf. Model.

Publications

Priya Sharma, Perry Haaland, Ashok K. Krishnamurthy, Bo Lan, Patrick L. Schmitt, Meghamala Sinha, Hao Xu, Karamarie Fecho
Evaluating robustness of a generalized linear model when applied to electronic health record data accessed using an Open API. Health Informatics J. 29 (2) (2023)
Deepak R. Unni, Sierra A. T. Moxon, Michael Bada, Matthew H. Brush, Richard M. Bruskiewich, Paul A. Clemons, Vlado Dancík, Michel Dumontier, Karamarie Fecho, Gustavo Glusman, Jennifer J. Hadlock, Nomi L. Harris, Arpita Joshi, Tim E. Putman, Guangrong Qin, Stephen A. Ramsey, Kent A. Shefchek, Harold Solbrig, Karthik Soman, Anne T. Thessen, Melissa A. Haendel, Chris Bizon, Christopher J. Mungall
Biolink Model: A Universal Schema for Knowledge Graphs in Clinical, Biomedical, and Translational Science. CoRR (2022)
Karamarie Fecho, Stanley C. Ahalt, Michael Knowles, Ashok K. Krishnamurthy, Margaret Leigh, Kenneth Morton, Emily R. Pfaff, Max Wang, Hong Yi
Leveraging Open Electronic Health Record Data and Environmental Exposures Data to Derive Insights Into Rare Pulmonary Disease. Frontiers Artif. Intell. 5 (2022)
David Borland, Irena Brain, Karamarie Fecho, Emily R. Pfaff, Hao Xu, James Champion, Chris Bizon, David Gotz
Enabling Longitudinal Exploratory Analysis of Clinical COVID Data. VAHC (2021)
David Borland, Irena Brain, Karamarie Fecho, Emily R. Pfaff, Hao Xu, James Champion, Chris Bizon, David Gotz
Enabling Longitudinal Exploratory Analysis of Clinical COVID Data. CoRR (2021)
Hao Xu, Steven Cox, Lisa Stillwell, Emily R. Pfaff, James Champion, Stanley C. Ahalt, Karamarie Fecho
FHIR PIT: an open software application for spatiotemporal integration of clinical data and environmental exposures data. BMC Medical Informatics Decis. Mak. 20 (1) (2020)
Karamarie Fecho, Chris Bizon, Frederick W. Miller, Shepherd Schurman, Charles Schmitt, William Xue, Patrick Wang, Kenneth D. Morton, Steven Cox, Alexander Tropsha
Use of the Open ROBOKOP Knowledge Graph-Based Application to Provide Mechanistic Explanations for Observed Associations between Environmental Exposures and Immune-Mediated Diseases. AMIA (2020)
Xingmin Aaron Zhang, Amy Yates, Nicole A. Vasilevsky, Jean-Philippe F. Gourdine, Tiffany J. Callahan, Leigh C. Carmody, Daniel Danis, Marcin P. Joachimiak, Vida Ravanmehr, Emily R. Pfaff, James Champion, Kimberly Robasky, Hao Xu, Karamarie Fecho, Nephi A. Walton, Richard L. Zhu, Justin Ramsdill, Christopher J. Mungall, Sebastian Köhler, Melissa A. Haendel, Clement J. McDonald, Daniel J. Vreeman, David B. Peden, Tellen D. Bennett, James A. Feinstein, Blake Martin, Adrianne L. Stefanski, Lawrence E. Hunter, Christopher G. Chute, Peter N. Robinson
Semantic integration of clinical laboratory tests from electronic health records for deep phenotyping and biomarker discovery. npj Digit. Medicine 2 (2019)
Kenneth Morton, Patrick Wang, Chris Bizon, Steven Cox, James P. Balhoff, Yaphet Kebede, Karamarie Fecho, Alexander Tropsha
ROBOKOP: an abstraction layer and user interface for knowledge graphs to support question answering. Bioinform. 35 (24) (2019)
Karamarie Fecho, Stanley C. Ahalt, Saravanan Arunachalam, James Champion, Christopher G. Chute, Sarah Davis, Kenneth Gersing, Gustavo Glusman, Jennifer Hadlock, Jewel Lee, Emily R. Pfaff, Max Robinson, Eric Sid, Casey N. Ta, Hao Xu, Richard Zhu, Qian Zhu, David B. Peden
Sex, obesity, diabetes, and exposure to particulate matter among patients with severe asthma: Scientific insights from a comparative analysis of open clinical data sources during a five-day hackathon. J. Biomed. Informatics 100 (2019)
Karamarie Fecho, Emily R. Pfaff, Hao Xu, James Champion, Steve Cox, Lisa Stillwell, David B. Peden, Chris Bizon, Ashok K. Krishnamurthy, Alexander Tropsha, Stanley C. Ahalt
A novel approach for exposing and sharing clinical data: the Translator Integrated Clinical and Environmental Exposures Service. J. Am. Medical Informatics Assoc. 26 (10) (2019)
Chris Bizon, Steven Cox, James P. Balhoff, Yaphet Kebede, Patrick Wang, Kenneth Morton, Karamarie Fecho, Alexander Tropsha
ROBOKOP KG and KGB: Integrated Knowledge Graphs from Federated Sources. J. Chem. Inf. Model. 59 (12) (2019)
Jay Aikat, Thomas M. Carsey, Karamarie Fecho, Kevin Jeffay, Ashok K. Krishnamurthy, Peter J. Mucha, Arcot Rajasekar, Stanley C. Ahalt
Scientific Training in the Era of Big Data: A New Pedagogy for Graduate Education. Big Data 5 (1) (2017)