Vida Ravanmehr

Publication Activity (10 Years)

Years Active: 2009-2023
Publications (10 Years): 14

Top Venues

CoRR

ISIT

ITA

Bioinform.

University of Arizona, Tucson, USA (PHD)

Education History

University of Arizona, Tucson, USA

PHD

Publications

Luca Cappelletti, Tommaso Fontana, Elena Casiraghi, Vida Ravanmehr, Tiffany J. Callahan, Carlos Cano, Marcin P. Joachimiak, Christopher J. Mungall, Peter N. Robinson, Justin T. Reese, Giorgio Valentini
GRAPE for fast and scalable graph processing and random-walk-based embedding. Nat. Comput. Sci. 3 (6) (2023)
J. Harry Caufield, Tim E. Putman, Kevin Schaper, Deepak R. Unni, Harshad Hegde, Tiffany J. Callahan, Luca Cappelletti, Sierra A. T. Moxon, Vida Ravanmehr, Seth Carbon, Lauren E. Chan, Katherina Cortes, Kent A. Shefchek, Glass Elsarboukh, James P. Balhoff, Tommaso Fontana, Nicolas Matentzoglu, Richard M. Bruskiewich, Anne E. Thessen, Nomi L. Harris, Monica C. Munoz-Torres, Melissa A. Haendel, Peter N. Robinson, Marcin P. Joachimiak, Christopher J. Mungall, Justin T. Reese
KG-Hub - Building and Exchanging Biological Knowledge Graphs. CoRR (2023)
Luca Cappelletti, Tommaso Fontana, Elena Casiraghi, Vida Ravanmehr, Tiffany J. Callahan, Marcin P. Joachimiak, Christopher J. Mungall, Peter N. Robinson, Justin T. Reese, Giorgio Valentini
GraPE: fast and scalable Graph Processing and Embedding. CoRR (2021)
Giorgio Valentini, Elena Casiraghi, Luca Cappelletti, Vida Ravanmehr, Tommaso Fontana, Justin T. Reese, Peter N. Robinson
Het-node2vec: second order random walk sampling for heterogeneous multigraphs embedding. CoRR (2021)
Justin T. Reese, Deepak R. Unni, Tiffany J. Callahan, Luca Cappelletti, Vida Ravanmehr, Seth Carbon, Kent A. Shefchek, Benjamin M. Good, James P. Balhoff, Tommaso Fontana, Hannah Blau, Nicolas Matentzoglu, Nomi L. Harris, Monica C. Munoz-Torres, Melissa A. Haendel, Peter N. Robinson, Marcin P. Joachimiak, Christopher J. Mungall
KG-COVID-19: A Framework to Produce Customized Knowledge Graphs for COVID-19 Response. Patterns 2 (1) (2021)
Kent A. Shefchek, Nomi L. Harris, Michael A. Gargano, Nicolas Matentzoglu, Deepak R. Unni, Matthew H. Brush, Dan Keith, Tom Conlin, Nicole A. Vasilevsky, Xingmin Aaron Zhang, James P. Balhoff, Larry Babb, Susan M. Bello, Hannah Blau, Yvonne M. Bradford, Seth Carbon, Leigh Carmody, Lauren E. Chan, Valentina Cipriani, Alayne Cuzick, Maria G. Della Rocca, Nathan A. Dunn, Shahim Essaid, Petra Fey, Christian A. Grove, Jean-Philippe F. Gourdine, Ada Hamosh, Midori A. Harris, Ingo Helbig, Maureen E. Hoatlin, Marcin P. Joachimiak, Simon Jupp, Kenneth B. Lett, Suzanna E. Lewis, Craig McNamara, Zoë May Pendlington, Clare Pilgrim, Tim E. Putman, Vida Ravanmehr, Justin T. Reese, Erin Rooney Riggs, Sofia M. C. Robb, Paola Roncaglia, James Seager, Erik Segerdell, Morgan Similuk, Andrea L. Storm, Courtney Thaxon, Anne E. Thessen, Julius O. B. Jacobsen, Julie A. McMurry, Tudor Groza, Sebastian Köhler, Damian Smedley, Peter N. Robinson, Christopher J. Mungall, Melissa A. Haendel, Monica C. Munoz-Torres, David Osumi-Sutherland
The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species. Nucleic Acids Res. 48 (Database-Issue) (2020)
Xingmin Aaron Zhang, Amy Yates, Nicole A. Vasilevsky, Jean-Philippe F. Gourdine, Tiffany J. Callahan, Leigh C. Carmody, Daniel Danis, Marcin P. Joachimiak, Vida Ravanmehr, Emily R. Pfaff, James Champion, Kimberly Robasky, Hao Xu, Karamarie Fecho, Nephi A. Walton, Richard L. Zhu, Justin Ramsdill, Christopher J. Mungall, Sebastian Köhler, Melissa A. Haendel, Clement J. McDonald, Daniel J. Vreeman, David B. Peden, Tellen D. Bennett, James A. Feinstein, Blake Martin, Adrianne L. Stefanski, Lawrence E. Hunter, Christopher G. Chute, Peter N. Robinson
Semantic integration of clinical laboratory tests from electronic health records for deep phenotyping and biomarker discovery. npj Digit. Medicine 2 (2019)
Vida Ravanmehr, Minji Kim, Zhiying Wang, Olgica Milenkovic
ChIPWig: a random access-enabling lossless and lossy compression method for ChIP-seq data. Bioinform. 34 (6) (2018)
Vida Ravanmehr, Gregory J. Puleo, Sadegh Bolouki, Olgica Milenkovic
Paired threshold graphs. Discret. Appl. Math. 250 (2018)
Vida Ravanmehr, Sadegh Bolouki, Gregory J. Puleo, Olgica Milenkovic
Doubly threshold graphs for social network modeling. ITW (2016)
Vida Ravanmehr, Mehrdad Khatami, David Declercq, Bane V. Vasic
Check-hybrid GLDPC Codes: Systematic Elimination of Trapping Sets and Guaranteed Error Correction Capability. CoRR (2016)
Vida Ravanmehr, Sadegh Bolouki, Gregory J. Puleo, Olgica Milenkovic
Doubly Threshold Graphs for Social Network Modeling. CoRR (2016)
Vida Ravanmehr, Mehrdad Khatami, David Declercq, Bane Vasic
Check-hybrid GLDPC codes: Systematic elimination of trapping sets and guaranteed error correction capability. Trans. Emerg. Telecommun. Technol. 27 (12) (2016)
Bane Vasic, Predrag Ivanis, Srdan Brkic, Vida Ravanmehr
Fault-resilient decoders and memories made of unreliable components. ITA (2015)
Vida Ravanmehr, David Declercq, Bane V. Vasic
Check-hybrid GLDPC codes without small trapping sets. ITA (2014)
Mehrdad Khatami, Vida Ravanmehr, Bane V. Vasic
GBP-based detection and symmetric information rate for rectangular-grain TDMR model. ISIT (2014)
Vida Ravanmehr, David Declercq, Bane V. Vasic
Check-hybrid GLDPC codes: Systematic elimination of trapping sets by super checks. ISIT (2014)
Bane V. Vasic, Vida Ravanmehr, Anantha Raman Krishnan
An Information Theoretic Approach to Constructing Robust Boolean Gene Regulatory Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 9 (1) (2012)
Vida Ravanmehr, Ludovic Danjean, Bane Vasic, David Declercq
Signal recovery performance of the interval-passing algorithm. ISTC (2012)
Vida Ravanmehr, Bane V. Vasic
Quasi-cyclic codes exhibiting the gene regulatory network of the cell cycle. CIBCB (2012)
Vida Ravanmehr, Ludovic Danjean, Bane V. Vasic, David Declercq
Interval-Passing Algorithm for Non-Negative Measurement Matrices: Performance and Reconstruction Analysis. IEEE J. Emerg. Sel. Topics Circuits Syst. 2 (3) (2012)
Vida Ravanmehr, Ludovic Danjean, David Declercq, Bane Vasic
On iterative compressed sensing reconstruction of sparse non-negative vectors. ISABEL (2011)
Morteza Esmaeili, Vida Ravanmehr
Two Classes of Optimal Stopping Redundancy Codes. Ars Comb. 92 (2009)

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Publication Activity (10 Years)

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Vida Ravanmehr