Richard A. Gibbs

Publication Activity (10 Years)

Years Active: 1991-2024
Publications (10 Years): 10

Top Topics

Security Systems

Synthetic Datasets

Sequence Analysis

Top Venues

J. Am. Medical Informatics Assoc.

Source Code Biol. Medicine

Nucleic Acids Res.

Publications

Mullai Murugan, Bo Yuan, Eric Venner, Christie M. Ballantyne, Katherine M. Robinson, James C. Coons, Liwen Wang, Philip E. Empey, Richard A. Gibbs
Empowering personalized pharmacogenomics with generative AI solutions. J. Am. Medical Informatics Assoc. 31 (6) (2024)
Mullai Murugan, Lawrence J. Babb, Casey Overby Taylor, Luke V. Rasmussen, Robert R. Freimuth, Eric Venner, Fei Yan, Victoria Yi, Stephen J. Granite, Hana Zouk, Samuel J. Aronson, Kevin Power, Alexander Fedotov, David R. Crosslin, David Fasel, Gail P. Jarvik, Hakon Hakonarson, Hana Bangash, Iftikhar J. Kullo, John J. Connolly, Jordan G. Nestor, Pedro J. Caraballo, Wei-Qi Wei, Ken Wiley, Heidi L. Rehm, Richard A. Gibbs
Genomic considerations for FHIR®; eMERGE implementation lessons. J. Biomed. Informatics 118 (2021)
Eric Venner, Mullai Murugan, Walker Hale, Jordan M. Jones, Shan Lu, Victoria Yi, Richard A. Gibbs
ARBoR: an identity and security solution for clinical reporting. J. Am. Medical Informatics Assoc. 26 (11) (2019)
Samuel J. Aronson, Lawrence J. Babb, Darren C. Ames, Richard A. Gibbs, Eric Venner, John J. Connelly, Keith Marsolo, Chunhua Weng, Marc S. Williams, Andrea L. Hartzler, Wayne H. Liang, James D. Ralston, Emily Beth Devine, Shawn N. Murphy, Christopher G. Chute, Pedro J. Caraballo, Iftikhar J. Kullo, Robert R. Freimuth, Luke V. Rasmussen, Firas H. Wehbe, Josh F. Peterson, Jamie R. Robinson, Ken Wiley, Casey Overby Taylor, eMERGE Network EHRI Working Group
Empowering genomic medicine by establishing critical sequencing result data flows: the eMERGE example. J. Am. Medical Informatics Assoc. 25 (10) (2018)
Yong Chen, Li Zhao, Yi Wang, Ming Cao, Violet Gelowani, Mingchu Xu, Smriti A. Agrawal, Yumei Li, Stephen P. Daiger, Richard A. Gibbs, Fei Wang, Rui Chen
SeqCNV: a novel method for identification of copy number variations in targeted next-generation sequencing data. BMC Bioinform. 18 (1) (2017)
David Rio Deiros, Richard A. Gibbs, Jeffrey Rogers
DNAism: exploring genomic datasets on the web with Horizon Charts. BMC Bioinform. 17 (2016)
Caleb F. Davis, Deborah I. Ritter, David A. Wheeler, Hongmei Wang, Yan Ding, Shannon P. Dugan, Matthew N. Bainbridge, Donna M. Muzny, Pulivarthi H. Rao, Tsz-Kwong Man, Sharon E. Plon, Richard A. Gibbs, Ching C. Lau
SV-STAT accurately detects structural variation via alignment to reference-based assemblies. Source Code Biol. Medicine 11 (1) (2016)
Navin Rustagi, Oliver A. Hampton, Jie Li, Liu Xi, Richard A. Gibbs, Sharon E. Plon, Marek Kimmel, David A. Wheeler
ITD assembler: an algorithm for internal tandem duplication discovery from short-read sequencing data. BMC Bioinform. 17 (2016)
Zhuoyi Huang, Navin Rustagi, Narayanan Veeraraghavan, Andrew Carroll, Richard A. Gibbs, Eric Boerwinkle, Manjunath Gorentla Venkata, Fuli Yu
A hybrid computational strategy to address WGS variant analysis in >5000 samples. BMC Bioinform. 17 (2016)
Xinxia Peng, Jean Thierry-Mieg, Danielle Thierry-Mieg, Andrew Nishida, Lenore Pipes, Marjan Bozinoski, Matthew J. Thomas, Sara Kelly, Jeffrey M. Weiss, Muthuswamy Raveendran, Donna M. Muzny, Richard A. Gibbs, Jeffrey Rogers, Gary P. Schroth, Michael G. Katze, Christopher E. Mason
Tissue-specific transcriptome sequencing analysis expands the non-human primate reference transcriptome resource (NHPRTR). Nucleic Acids Res. 43 (Database-Issue) (2015)
Jeffrey G. Reid, Andrew Carroll, Narayanan Veeraraghavan, Mahmoud Dahdouli, Andreas Sundquist, Adam C. English, Matthew N. Bainbridge, Simon White, William J. Salerno, Christian Buhay, Fuli Yu, Donna M. Muzny, Richard Daly, Geoff Duyk, Richard A. Gibbs, Eric Boerwinkle
Launching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline. BMC Bioinform. 15 (2014)
Danny Challis, Jin Yu, Uday S. Evani, Andrew R. Jackson, Sameer Paithankar, Cristian Coarfa, Aleksandar Milosavljevic, Richard A. Gibbs, Fuli Yu
An integrative variant analysis suite for whole exome next-generation sequencing data. BMC Bioinform. 13 (2012)
Jinghui Zhang, David A. Wheeler, Imtiaz Yakub, Sharon Wei, Raman Sood, William Rowe, Paul P. Liu, Richard A. Gibbs, Kenneth H. Buetow
SNPdetector: A Software Tool for Sensitive and Accurate SNP Detection. PLoS Comput. Biol. 1 (5) (2005)
Brian S. Henriksen, Todd J. Zahn, Jeffrey D. Evanseck, Steven M. Firestine, Richard A. Gibbs
Computational and Conformational Evaluation of FTase Alternative Substrates: Insight into a Novel Enzyme Binding Pocket. J. Chem. Inf. Model. 45 (4) (2005)
John Bouck, Michael P. McLeod, Kim Worley, Richard A. Gibbs
The Human Transcript Database: a catalogue of full length cDNA inserts. Bioinform. 16 (2) (2000)
Michael L. Metzker, Kyle M. Allain, Richard A. Gibbs
Accurate determination of DNA in agarose gels using the novel algorithm GelScann(1.0). Comput. Appl. Biosci. 11 (2) (1995)
Richard A. Gibbs, Peter J. Slater
Distinct distance sets in a graph. Discret. Math. 93 (2-3) (1991)