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Comput. Appl. Biosci.
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1985
1997
Keyphrases
Publications
volume 13, number 3, 1997
Rainer Fuchs
Grouper - creation of marker sets for multiplexed genotyping.
Comput. Appl. Biosci.
13 (3) (1997)
András Fiser
,
Zsuzsanna Dosztányi
,
István Simon
The role of long-range interactions in defining the secondary structure of proteins is overestimated.
Comput. Appl. Biosci.
13 (3) (1997)
Andrew Rambaut
,
Paul H. Harvey
,
Sean Nee
End-Epi: an application for inferring phylogenetic and population dynamical processes from molecular sequences.
Comput. Appl. Biosci.
13 (3) (1997)
Andrew Rambaut
,
Nicholas C. Grassly
Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees.
Comput. Appl. Biosci.
13 (3) (1997)
Florencio Pazos
,
O. Olmea
,
Alfonso Valencia
A graphical interface for correlated mutations and other protein structure prediction methods.
Comput. Appl. Biosci.
13 (3) (1997)
volume 13, number 4, 1997
Steven Salzberg
A method for identifying splice sites and translational start sites in eukaryotic mRNA.
Comput. Appl. Biosci.
13 (4) (1997)
J. Schafer
,
M. Schoniger
DISTREE: a tool for estimating genetic distances between aligned DNA sequences.
Comput. Appl. Biosci.
13 (4) (1997)
L. I. Toldo
JaMBW 1.1: Java-based Molecular Biologists' Workbench.
Comput. Appl. Biosci.
13 (4) (1997)
Masahiro Ito
,
Yo Matsuo
,
Ken Nishikawa
Prediction of protein secondary structure using the 3D-1D compatibility algorithm.
Comput. Appl. Biosci.
13 (4) (1997)
William Noble Grundy
,
Timothy L. Bailey
,
Charles Elkan
,
Michael E. Baker
Meta-MEME: motif-based hidden Markov models of protein families.
Comput. Appl. Biosci.
13 (4) (1997)
J. S. Amthor
Calculation of daylength.
Comput. Appl. Biosci.
13 (4) (1997)
Tatsuya Akutsu
,
Kentaro Onizuka
,
Masato Ishikawa
Rapid protein fragment search using hash functions based on the Fourier transform.
Comput. Appl. Biosci.
13 (4) (1997)
Rob W. W. Hooft
,
Chris Sander
,
Gert Vriend
Objectively judging the quality of a protein structure from a Ramachandran plot.
Comput. Appl. Biosci.
13 (4) (1997)
Richard Mott
EST_GENOME: a program to align spliced DNA sequences to unspliced genomic DNA.
Comput. Appl. Biosci.
13 (4) (1997)
David B. Searls
Linguistic approaches to biological sequences.
Comput. Appl. Biosci.
13 (4) (1997)
R. W. Gill
,
T. Charles Hodgman
,
C. B. Littler
,
M. D. Oxer
,
D. S. Montgomery
,
S. Taylor
,
P. Sanseau
A new dynamic tool to perform assembly of expressed sequence tags (ESTs).
Comput. Appl. Biosci.
13 (4) (1997)
William R. Pearson
Identifying distantly related protein sequences.
Comput. Appl. Biosci.
13 (4) (1997)
Bruce A. Shapiro
,
Jin Chu Wu
Predicting RNA H-type pseudoknots with the massively parallel genetic algorithm.
Comput. Appl. Biosci.
13 (4) (1997)
Hiroyuki Toh
Introduction of a distance cut-off into structural alignment by the double dynamic programming algorithm.
Comput. Appl. Biosci.
13 (4) (1997)
Steven Lay
,
D. Bray
A computer program for the analysis of protein complex formation.
Comput. Appl. Biosci.
13 (4) (1997)
E. Lorenz
,
S. Leeton
,
R. J. Owen
A simple method for sizing large fragments of bacterial DNA separated by PFGE.
Comput. Appl. Biosci.
13 (4) (1997)
Miguel A. Andrade
,
Georg Casari
,
Antoine de Daruvar
,
Chris Sander
,
Reinhard Schneider
,
Javier Tamames
,
Alfonso Valencia
,
Christos A. Ouzounis
Sequence analysis of the Methanococcus jannaschii genome and the prediction of protein function.
Comput. Appl. Biosci.
13 (4) (1997)
P. Durand
,
L. Canard
,
J. P. Mornon
Visual BLAST and visual FASTA: graphic workbenches for interactive analysis of full BLAST and FASTA outputs under Microsoft Windows 95/NT.
Comput. Appl. Biosci.
13 (4) (1997)
Burkhard Rost
,
Seán I. O'Donoghue
Sisyphus and prediction of protein structure.
Comput. Appl. Biosci.
13 (4) (1997)
V. Biaudet
,
Franck Samson
,
Philippe Bessières
Micado - a network-oriented database for microbial genomes.
Comput. Appl. Biosci.
13 (4) (1997)
Jan-Hendrik S. Hofmeyr
,
Athel Cornish-Bowden
The reversible Hill equation: how to incorporate cooperative enzymes into metabolic models.
Comput. Appl. Biosci.
13 (4) (1997)
Ross D. King
,
Mansoor A. S. Saqi
,
Roger A. Sayle
,
Michael J. E. Sternberg
DSC: public domain protein secondary structure predication.
Comput. Appl. Biosci.
13 (4) (1997)
volume 13, number 5, 1997
David S. Wishart
,
Scott Fortin
,
David R. Woloschuk
,
Warren Wong
,
Timothy Rosborough
,
Gary H. Van Domselaar
,
Jonathan Schaeffer
,
Duane Szafron
A platform-independent graphical user interface for SEQSEE and XALIGN.
Comput. Appl. Biosci.
13 (5) (1997)
Ziheng Yang
PAML: a program package for phylogenetic analysis by maximum likelihood.
Comput. Appl. Biosci.
13 (5) (1997)
W. Gronwald
,
Robert F. Boyko
,
Brian D. Sykes
GSC: a graphical program for NMR chemical shift comparison.
Comput. Appl. Biosci.
13 (5) (1997)
Hugh E. Williams
,
Justin Zobel
Compression of nucleotide databases for fast searching.
Comput. Appl. Biosci.
13 (5) (1997)
Benny Shomer
Seqalert - a daily sequence alertness server for the EMBL and SWISSPROT databases.
Comput. Appl. Biosci.
13 (5) (1997)
Inge Jonassen
Efficient discovery of conserved patterns using a pattern graph.
Comput. Appl. Biosci.
13 (5) (1997)
Jean-Paul Rolland
,
P. Bon
,
D. Thomas
MACS: automatic counting of objects based on shape recognition.
Comput. Appl. Biosci.
13 (5) (1997)
S. Goldberg
,
P. Ferrand
,
N. Q. Nguyen
,
Jean-François Boisvieux
,
Serge A. Hazout
Bi-dimensional scaling map (BDS-Map): an approach for building large genetic maps.
Comput. Appl. Biosci.
13 (5) (1997)
Nicholas C. Grassly
,
Jun Adachi
,
Andrew Rambaut
PSeq-Gen: an application for the Monte Carlo simulation of protein sequence evolution along phylogenetic trees.
Comput. Appl. Biosci.
13 (5) (1997)
Carol Soderlund
,
Ian Longden
,
Richard Mott
FPC: a system for building contigs from restriction fingerprinted clones.
Comput. Appl. Biosci.
13 (5) (1997)
Ilya N. Shindyalov
,
Philip E. Bourne
Protein data representation and query using optimized data decomposition.
Comput. Appl. Biosci.
13 (5) (1997)
Ronald G. Forsythe Jr.
,
Peter D. Karp
,
Michael L. Mavrovouniotis
Estimation of equilibrium constants using automated group contribution methods.
Comput. Appl. Biosci.
13 (5) (1997)
volume 13, number 6, 1997
Pascale Guerdoux-Jamet
,
Dominique Lavenier
SAMBA: hardware accelerator for biological sequence comparison.
Comput. Appl. Biosci.
13 (6) (1997)
Thomas Sicheritz-Pontén
BioWish: a molecular biology command extension to Tcl/Tk.
Comput. Appl. Biosci.
13 (6) (1997)
Jens Stoye
,
Vincent Moulton
,
Andreas W. M. Dress
DCA: an efficient implementation of the divide-and-conquer approach to simultaneous multiple sequence alignment.
Comput. Appl. Biosci.
13 (6) (1997)
Hedvig Hegyi
,
J. M. Lai
,
Peer Bork
The Sequence Alerting Server - a new WEB server.
Comput. Appl. Biosci.
13 (6) (1997)
P. A. Doris
,
A. Hayward-Lester
,
J. K. Hays Sr.
Q-RT-PCR: data analysis software for measurement of gene expression by competitive RT-PCR.
Comput. Appl. Biosci.
13 (6) (1997)
Ching Zhang
,
Andrew K. C. Wong
A genetic algorithm for multiple molecular sequence alignment.
Comput. Appl. Biosci.
13 (6) (1997)
Hiroaki Kato
,
Yoshimasa Takahashi
SS3D-P2: a three dimensional substructure search program for protein motifs based on secondary structure elements.
Comput. Appl. Biosci.
13 (6) (1997)
Jérôme Gouzy
,
P. Eugène
,
Elizabeth A. Greene
,
Daniel Kahn
,
Florence Corpet
XDOM, a graphical tool to analyse domain arrangements in any set of protein sequences.
Comput. Appl. Biosci.
13 (6) (1997)
David Fenyö
A software tool for the analysis of mass spectrometric disulfide mapping experiments.
Comput. Appl. Biosci.
13 (6) (1997)
Jan Gorodkin
,
Laurie J. Heyer
,
Søren Brunak
,
Gary D. Stormo
Displaying the information contents of structural RNA alignments: the structure logos.
Comput. Appl. Biosci.
13 (6) (1997)
A. S. Law
,
D. W. Burt
Two applications to facilitate the viewing of database search result files on the Macintosh.
Comput. Appl. Biosci.
13 (6) (1997)