Robert J. Carroll

Publication Activity (10 Years)

Years Active: 2012-2024
Publications (10 Years): 26

Top Topics

Biologically Meaningful

Algorithmic Approaches

Top Venues

J. Am. Medical Informatics Assoc.

J. Biomed. Informatics

Publications

Andrew Guide, Lina Sulieman, Shawn Garbett, Robert M. Cronin, Matthew E. Spotnitz, Karthik Natarajan, Robert J. Carroll, Paul A. Harris, Qingxia Chen
Identifying erroneous height and weight values from adult electronic health records in the All of Us research program. J. Biomed. Informatics 155 (2024)
Megan M. Shuey, William W. Stead, Ida Aka, April L. Barnado, Lisa Bastarache, Elly Brokamp, Meredith Campbell, Robert J. Carroll, Jeffrey A. Goldstein, Adam Lewis, Beth A. Malow, Jonathan D. Mosley, Travis Osterman, Dolly A Padovani-Claudio, Andrea Ramirez, Dan M. Roden, Bryce A Schuler, Edward Siew, Jennifer Sucre, Isaac Thomsen, Rory J. Tinker, Sara Van Driest, Colin Walsh, Jeremy L. Warner, Quinn Stanton Wells, Lee E. Wheless
Next-generation phenotyping: introducing phecodeX for enhanced discovery research in medical phenomics. Bioinform. 39 (10) (2023)
Pascal S. Brandt, Abel N. Kho, Yuan Luo, Jennifer A. Pacheco, Theresa L. Walunas, Hakon Hakonarson, George Hripcsak, Cong Liu, Ning Shang, Chunhua Weng, Nephi Walton, David S. Carrell, Paul K. Crane, Eric B. Larson, Christopher G. Chute, Iftikhar J. Kullo, Robert J. Carroll, Joshua C. Denny, Andrea H. Ramirez, Wei-Qi Wei, Jyotishman Pathak, Laura K. Wiley, Rachel L. Richesson, Justin B. Starren, Luke V. Rasmussen
Characterizing variability of electronic health record-driven phenotype definitions. J. Am. Medical Informatics Assoc. 30 (3) (2023)
Weiyi Xia, Melissa A. Basford, Robert J. Carroll, Ellen Wright Clayton, Paul A. Harris, Murat Kantarcioglu, Yongtai Liu, Steve Nyemba, Yevgeniy Vorobeychik, Zhiyu Wan, Bradley A. Malin
research program. J. Am. Medical Informatics Assoc. 30 (5) (2023)
Lina Sulieman, Jennifer Zhang, Kayla Marginean, Paul A. Harris, Robert J. Carroll
Assessing Data Quality and Diversity in the All of Us. AMIA (2022)
Jingzhi Yu, Jennifer A. Pacheco, Anika S. Ghosh, Yuan Luo, Chunhua Weng, Ning Shang, Barbara Benoit, David S. Carrell, Robert J. Carroll, Ozan Dikilitas, Robert R. Freimuth, Vivian S. Gainer, Hakon Hakonarson, George Hripcsak, Iftikhar J. Kullo, Frank D. Mentch, Shawn N. Murphy, Peggy L. Peissig, Andrea H. Ramirez, Nephi Walton, Wei-Qi Wei, Luke V. Rasmussen
Under-specification as the source of ambiguity and vagueness in narrative phenotype algorithm definitions. BMC Medical Informatics Decis. Mak. 22 (1) (2022)
Mirza S. Khan, Robert J. Carroll
research program. J. Am. Medical Informatics Assoc. 29 (4) (2022)
Hiral Master, Lina Sulieman, Paul A. Harris, Karthik Natarajan, Robert J. Carroll, Kayla Marginean, Kelsey R. Mayo, Aymone Kouame, Michael Lyons
Self-paced Training Modality to Promote the Use of All of Us Researcher Workbench in Educational and Research Settings. AMIA (2022)
Andrea H. Ramirez, Lina M. Sulieman, David J. Schlueter, Alese E. Halvorson, Jun Qian, Francis Ratsimbazafy, Roxana Loperena-Cortes, Kelsey R. Mayo, Melissa A. Basford, Nicole Deflaux, Karthik Muthuraman, Karthik Natarajan, Abel N. Kho, Hua Xu, Consuelo H. Wilkins, Hoda Anton-Culver, Eric Boerwinkle, Mine Cicek, Cheryl R. Clark, Elizabeth Cohn, Lucila Ohno-Machado, Sheri D. Schully, Brian K. Ahmedani, Maria Argos, Robert M. Cronin, Christopher J. O'Donnell, Mona Fouad, David B. Goldstein, Philip Greenland, Scott J. Hebbring, Elizabeth W. Karlson, Parinda Khatri, Bruce Korf, Jordan W. Smoller, Stephen Sodeke, John Wilbanks, Justin Hentges, Stephen Mockrin, Christopher Lunt, Stephanie A. Devaney, Kelly Gebo, Joshua C. Denny, Robert J. Carroll, David Glazer, Paul A. Harris, George Hripcsak, Anthony Philippakis, Dan M. Roden
Research Program: Data quality, utility, and diversity. Patterns 3 (8) (2022)
Lina M. Sulieman, Robert M. Cronin, Robert J. Carroll, Karthik Natarajan, Kayla Marginean, Brandy Mapes, Dan M. Roden, Paul A. Harris, Andrea H. Ramirez
Research Program. J. Am. Medical Informatics Assoc. 29 (7) (2022)
Lina Sulieman, Karthik Natarajan, Qingxia Chen, Robert J. Carroll, Kayla Marginean, Paul A. Harris, Andrea H. Ramirez
Measuring the correctness of All of Us physical measurement. AMIA (2021)
Robert M. Cronin, Alese E. Halvorson, Cassie Springer, Xiaoke Feng, Lina M. Sulieman, Roxana Loperena-Cortes, Kelsey R. Mayo, Robert J. Carroll, Qingxia Chen, Brian K. Ahmedani, Jason Karnes, Bruce Korf, Christopher J. O'Donnell, Jun Qian, Andrea H. Ramirez
Comparison of family health history in surveys vs electronic health record data mapped to the observational medical outcomes partnership data model in the All of Us Research Program. J. Am. Medical Informatics Assoc. 28 (4) (2021)
Izabelle P. Humes, Roxana Loperena-Cortes, Melissa A. Basford, Kelsey R. Mayo, Joseph DiPaolo, David J. Schlueter, Jun Qian, Wei-Qi Wei, Robert J. Carroll, David Glazer, Paul A. Harris, Anthony Philippakis, Dan M. Roden, Andrea H. Ramirez
The All of Us Research Program Researcher Workbench Phenotype Library: Five Disease Implementations. AMIA (2020)
Robert J. Carroll, Kristin Wuichet, Charles Phillips, Michelle Holko, Allison P. Heath
Curating Data and Communicating Quality for Impact in a FAIR World. AMIA (2020)
Andrea H. Ramirez, Kelsey R. Mayo, Robert J. Carroll, Karthik Muthuraman, Melissa A. Basford, David Glazer, Paul A. Harris, Anthony Philippakis, Dan M. Roden
The All of Us Research Program Researcher Workbench: Cloud based access and analytics to advance precision medicine. AMIA (2020)
Karthik Natarajan, Robert J. Carroll, Thomas R. Campion Jr., Joan Grand, Shyam Visweswaran
Curating EHR data in the All of Us Research Program. AMIA (2019)
George Hripcsak, Ning Shang, Peggy L. Peissig, Luke V. Rasmussen, Cong Liu, Barbara Benoit, Robert J. Carroll, David S. Carrell, Joshua C. Denny, Ozan Dikilitas, Vivian S. Gainer, Kayla Marie Howell, Jeffrey G. Klann, Iftikhar J. Kullo, Todd Lingren, Frank D. Mentch, Shawn N. Murphy, Karthik Natarajan, Chunhua Weng
Facilitating phenotype transfer using a common data model. J. Biomed. Informatics 96 (2019)
Ning Shang, Cong Liu, Luke V. Rasmussen, Casey N. Ta, Robert J. Carroll, Barbara Benoit, Todd Lingren, Ozan Dikilitas, Frank D. Mentch, David S. Carrell, Wei-Qi Wei, Yuan Luo, Vivian S. Gainer, Iftikhar J. Kullo, Jennifer A. Pacheco, Hakon Hakonarson, Theresa L. Walunas, Joshua C. Denny, Chunhua Weng
Making work visible for electronic phenotype implementation: Lessons learned from the eMERGE network. J. Biomed. Informatics 99 (2019)
Leena Choi, Robert J. Carroll, Cole Beck, Jonathan D. Mosley, Dan M. Roden, Joshua C. Denny, Sara L. Van Driest
Evaluating statistical approaches to leverage large clinical datasets for uncovering therapeutic and adverse medication effects. Bioinform. 34 (17) (2018)
Mary Regina Boland, Pradipta Parhi, Li Li, Riccardo Miotto, Robert J. Carroll, Usman Iqbal, Phung-Anh (Alex) Nguyen, Martijn J. Schuemie, Seng Chan You, Donahue Smith, Sean Mooney, Patrick B. Ryan, Yu-Chuan (Jack) Li, Rae Woong Park, Joshua C. Denny, Joel T. Dudley, George Hripcsak, Pierre Gentine, Nicholas P. Tatonetti
Uncovering exposures responsible for birth season - disease effects: a global study. J. Am. Medical Informatics Assoc. 25 (3) (2018)
Jennifer A. Pacheco, Luke V. Rasmussen, Richard C. Kiefer, Thomas R. Campion Jr., Peter Speltz, Robert J. Carroll, Sarah C. Stallings, Huan Mo, Monika Ahuja, Guoqian Jiang, Eric R. LaRose, Peggy L. Peissig, Ning Shang, Barbara Benoit, Vivian S. Gainer, Kenneth Borthwick, Kathryn L. Jackson, Ambrish Sharma, Andy Yizhou Wu, Abel N. Kho, Dan M. Roden, Jyotishman Pathak, Joshua C. Denny, William K. Thompson
A case study evaluating the portability of an executable computable phenotype algorithm across multiple institutions and electronic health record environments. J. Am. Medical Informatics Assoc. 25 (11) (2018)
Jamie R. Robinson, Lisa Bastarache, Robert J. Carroll, Elizabeth A. Scoville, David A. Schwartz, Joshua C. Denny
Sub-Phenotyping of Crohn's Disease Using a Large Electronic Record Cohort. AMIA (2017)
Robert J. Carroll, Joshua C. Mandel, Karthik Natarajan, Scott Sutherland, Joshua C. Denny
The Data and Research Center of the All of Us Research Program: Framework for a National Cohort Program and Research Opportunities. AMIA (2017)
Kelsey R. Mayo, Robert J. Carroll, Jason Tan, Rebecca Johnston, Celecia M. Scott, Joshua C. Denny, Paul A. Harris
HealthPro: An integrated web application for essential health data and biological specimen collection in the Precision Medicine Initiative. AMIA (2017)
Jamie R. Robinson, Zongyang Mou, Lisa Bastarache, Wei-Qi Wei, Robert J. Carroll, Joshua C. Denny
Association of BMI and Obesity Genetic Risk Score with Surgical Procedures Through a Procedure-wide Association Study. AMIA (2017)
Pedro L. Teixeira, Wei-Qi Wei, Robert M. Cronin, Huan Mo, Jacob P. VanHouten, Robert J. Carroll, Eric LaRose, Lisa Bastarache, S. Trent Rosenbloom, Todd L. Edwards, Dan M. Roden, Thomas A. Lasko, Richard A. Dart, Anne M. Nikolai, Peggy L. Peissig, Joshua C. Denny
Evaluating electronic health record data sources and algorithmic approaches to identify hypertensive individuals. J. Am. Medical Informatics Assoc. 24 (1) (2017)
Yoonjung Y. Joo, Jennifer A. Pacheco, Loren L. Armstrong, William K. Thompson, Robert J. Carroll, Joshua C. Denny, Peggy L. Peissig, James G. Linneman, Jyotishman Pathak, Girish N. Nadkarni, Laura Rasmussen-Torvik, M. Geoffrey Hayes, Abel N. Kho
A Genome- and Phenome- Wide Study of Diverticulosis. AMIA (2015)
Robert J. Carroll, Lisa Bastarache, Joshua C. Denny
R PheWAS: data analysis and plotting tools for phenome-wide association studies in the R environment. Bioinform. 30 (16) (2014)
Robert J. Carroll, Jeremy L. Warner, Anne E. Eyler, Charles Moore, Jayanth Doss, Katherine P. Liao, Robert M. Plenge, Joshua C. Denny
PheWAS and Genetics Define Subphenotypes in Drug Response. AMIA (2014)
Pedro L. Teixeira, Robert J. Carroll, Lisa Bastarache, Peter Speltz, Joshua C. Smith, Joshua C. Denny
Phenome-Wide Association Studies Using NLP-Derived Concepts. AMIA (2014)
Robert J. Carroll, Lisa Bastarache, Joshua C. Denny
Open Source R Implementation of the PheWAS Methodology. AMIA (2013)
Christine M. McEvoy, Robert J. Carroll, Lisa Bastarache, Wei-Qi Wei, Joshua C. Denny
Using PheWAS and Natural Language Processing to Discover Clinical Associations for Congenital Chest Deformities. AMIA (2013)
Robert J. Carroll, William K. Thompson, Anne E. Eyler, Arthur M. Mandelin, Tianxi Cai, Raquel M. Zink, Jennifer A. Pacheco, Chad S. Boomershine, Thomas A. Lasko, Hua Xu, Elizabeth W. Karlson, Raúl G. Pérez, Vivian S. Gainer, Shawn N. Murphy, Eric M. Ruderman, Richard M. Pope, Robert M. Plenge, Abel N. Kho, Katherine P. Liao, Joshua C. Denny
Portability of an algorithm to identify rheumatoid arthritis in electronic health records. J. Am. Medical Informatics Assoc. 19 (e1) (2012)
Robert J. Carroll, Katherine P. Liao, Anne E. Eyler, Lisa Bastarache, Dana C. Crawford, Peggy L. Peissig, Jyotishman Pathak, David Carrell, Abel N. Kho, Rongling Li, Daniel R. Masys, Gail P. Jarvik, Christopher G. Chute, Rex L. Chisholm, Eric B. Larson, Catherine A. McCarty, Iftikhar J. Kullo
Using PheWAS to Assess Pleiotropy of Genetic Risk Scores for Rheumatoid Arthritis and Coronary Artery Disease in the eMERGE Network. AMIA (2012)