Lucila Ohno-Machado

ORCID

Publication Activity (10 Years)

Years Active: 1995-2024
Publications (10 Years): 113

Top Venues

J. Am. Medical Informatics Assoc.

AMIA

CoRR

Database J. Biol. Databases Curation

Publications

Roger Lacson, Yufei Yu, Tsung-Ting Kuo, Lucila Ohno-Machado
Biomedical blockchain with practical implementations and quantitative evaluations: a systematic review. J. Am. Medical Informatics Assoc. 31 (6) (2024)
Thomas J. S. Durant, Elizabeth Knight, Brent G. Nelson, Sarah Dudgeon, Seung J. Lee, Dominic Walliman, Hobart P. Young, Lucila Ohno-Machado, Wade L. Schulz
A primer for quantum computing and its applications to healthcare and biomedical research. J. Am. Medical Informatics Assoc. 31 (8) (2024)
Brad Morse, Katherine K. Kim, Zixuan Xu, Cynthia G. Matsumoto, Lisa M. Schilling, Lucila Ohno-Machado, Selene S. Mak, Michelle S. Keller
Patient and researcher stakeholder preferences for use of electronic health record data: a qualitative study to guide the design and development of a platform to honor patient preferences. J. Am. Medical Informatics Assoc. 30 (6) (2023)
William W. Stead, Randolph A. Miller, Lucila Ohno-Machado, Suzanne Bakken
JAMIA at 30: looking back and forward. J. Am. Medical Informatics Assoc. 31 (1) (2023)
Tsung-Ting Kuo, Anh Pham, Maxim E. Edelson, Jihoon Kim, Jason Chan, Yash Gupta, Lucila Ohno-Machado, David M. Anderson, Chandrasekar Balacha, Tyler Bath, Sally L. Baxter, Andrea Becker-Pennrich, Douglas S. Bell, Elmer V. Bernstam, Ngan Chau, Michele E. Day, Jason N. Doctor, Scott L. DuVall, Robert El-Kareh, Renato Florian, Robert W. Follett, Benjamin P. Geisler, Alessandro Ghigi, Assaf Gottlieb, Ludwig Christian G. Hinske, Zhaoxian Hu, Diana Ir, Xiaoqian Jiang, Katherine K. Kim, Tara K. Knight, Jejo D. Koola, Nelson Lee, Ulrich Mansmann, Michael E. Matheny, Daniella Meeker, Zongyang Mou, Larissa Neumann, Nghia H. Nguyen, Nick Anderson, Eunice Park, Paulina Paul, Mark J. Pletcher, Kai W. Post, Clemens Rieder, Clemens Scherer, Lisa M. Schilling, Andrey Soares, Spencer L. SooHoo, Ekin Soysal, Steven Covington, Brian Tep, Brian Toy, Baocheng Wang, Zhen R. Wu, Hua Xu, Yong K. Choi, Kai Zheng, Yujia Zhou, Rachel A Zucker
Blockchain-enabled immutable, distributed, and highly available clinical research activity logging system for federated COVID-19 data analysis from multiple institutions. J. Am. Medical Informatics Assoc. 30 (6) (2023)
Lucila Ohno-Machado, Xiaoqian Jiang, Tsung-Ting Kuo, Shiqiang Tao, Luyao Chen, Pritham Ram, Guo-Qiang Zhang, Hua Xu
A hierarchical strategy to minimize privacy risk when linking "De-identified" data in biomedical research consortia. J. Biomed. Informatics 139 (2023)
Tsung-Ting Kuo, Xiaoqian Jiang, Hua Xu, Li Xiong, Lucila Ohno-Machado
Existing and emerging privacy challenges and solutions for federated data coordination. AMIA (2022)
Fatemeh Amrollahi, Supreeth Prajwal Shashikumar, Angela Meier, Lucila Ohno-Machado, Shamim Nemati, Gabriel Wardi
Inclusion of social determinants of health improves sepsis readmission prediction models. J. Am. Medical Informatics Assoc. 29 (7) (2022)
Christoph U. Lehmann, Patricia F. Brennan, Don E. Detmer, Gretchen P. Jackson, Lucila Ohno-Machado, Charles Safran, Jeffrey J. Williamson, Edward H. Shortliffe
A tribute to Karen Greenwood and her contributions to the American Medical Informatics Association. J. Am. Medical Informatics Assoc. 29 (5) (2022)
Ken Wiley, Laura Findley, Madison Goldrich, Tejinder K. Rakhra-Burris, Ana Stevens, Pamela Williams, Carol J. Bult, Rex L. Chisholm, Patricia Deverka, Geoffrey S. Ginsburg, Eric D. Green, Gail P. Jarvik, George A. Mensah, Erin Ramos, Mary V. Relling, Dan M. Roden, Robb Rowley, Gil Alterovitz, Samuel J. Aronson, Lisa Bastarache, James J. Cimino, Erin L. Crowgey, Guilherme Del Fiol, Robert R. Freimuth, Mark A. Hoffman, Janina M. Jeff, Kevin B. Johnson, Kensaku Kawamoto, Subha Madhavan, Eneida A. Mendonça, Lucila Ohno-Machado, Siddharth Pratap, Casey Overby Taylor, Marylyn D. Ritchie, Nephi Walton, Chunhua Weng, Teresa Zayas-Cabán, Teri A. Manolio, Marc S. Williams
A research agenda to support the development and implementation of genomics-based clinical informatics tools and resources. J. Am. Medical Informatics Assoc. 29 (8) (2022)
Cynthia Triplett, Burgundy J. Fletcher, Riley Taitingfong, Ying Zhang, Tauqeer Ali, Lucila Ohno-Machado, Cinnamon S. Bloss
Codesigning a community-based participatory research project to assess tribal perspectives on privacy and health data sharing: A report from the Strong Heart Study. J. Am. Medical Informatics Assoc. 29 (6) (2022)
Sharon E. Davis, Henry Ssemaganda, Jejo Koola, Jialin Mao, Dax M. Westerman, Theodore Speroff, Usha Govindarajulu, Craig Ramsay, Lucila Ohno-Machado, Frederic S. Resnic, Michael E. Matheny
A Framework for Generating Synthetic Clinical Datasets with Learning Effects to Support Methods Development and Validation. AMIA (2022)
Jejo D. Koola, Jialin Mao, Sharon E. Davis, Henry Ssemaganda, Dax M. Westerman, Lucila Ohno-Machado, Frederic S. Resnic, Michael E. Matheny
A Framework for Detecting Medical Device Safety Signals Confounded by Learning Effects Using Machine Learning. AMIA (2022)
Shiqiang Tao, Wei-Chun Chou, Jianfu Li, Jingcheng Du, Pritham Ram, Rashmie Abeysinghe, Hua Xu, Xiaoqian Jiang, Peter W. Rose, Lucila Ohno-Machado, Guo-Qiang Zhang
IMI-CDE: an interactive interface for collaborative mapping of study variables to common data elements. ICHI (2022)
Tsung-Ting Kuo, Lucila Ohno-Machado
NLM's sponsorship of research in biomedical informatics (1985-2016). Inf. Serv. Use 42 (1) (2022)
Henry Ssemaganda, Frederic S. Resnic, Sharon E. Davis, Usha Govindarajulu, Jejo Koola, Jialin Mao, Dax M. Westerman, Theodore Speroff, Craig Ramsay, Art Sedrakyan, Lucila Ohno-Machado, Michael E. Matheny
Disentangling and Characterizing Device Safety Signals and Learning Effects. AMIA (2022)
Andrea H. Ramirez, Lina M. Sulieman, David J. Schlueter, Alese E. Halvorson, Jun Qian, Francis Ratsimbazafy, Roxana Loperena-Cortes, Kelsey R. Mayo, Melissa A. Basford, Nicole Deflaux, Karthik Muthuraman, Karthik Natarajan, Abel N. Kho, Hua Xu, Consuelo H. Wilkins, Hoda Anton-Culver, Eric Boerwinkle, Mine Cicek, Cheryl R. Clark, Elizabeth Cohn, Lucila Ohno-Machado, Sheri D. Schully, Brian K. Ahmedani, Maria Argos, Robert M. Cronin, Christopher J. O'Donnell, Mona Fouad, David B. Goldstein, Philip Greenland, Scott J. Hebbring, Elizabeth W. Karlson, Parinda Khatri, Bruce Korf, Jordan W. Smoller, Stephen Sodeke, John Wilbanks, Justin Hentges, Stephen Mockrin, Christopher Lunt, Stephanie A. Devaney, Kelly Gebo, Joshua C. Denny, Robert J. Carroll, David Glazer, Paul A. Harris, George Hripcsak, Anthony Philippakis, Dan M. Roden
Research Program: Data quality, utility, and diversity. Patterns 3 (8) (2022)
Tsung-Ting Kuo, Xiaoqian Jiang, Haixu Tang, XiaoFeng Wang, Arif Ozgun Harmanci, Miran Kim, Kai W. Post, Diyue Bu, Tyler Bath, Jihoon Kim, Weijie Liu, Hongbo Chen, Lucila Ohno-Machado
The evolving privacy and security concerns for genomic data analysis and sharing as observed from the iDASH competition. J. Am. Medical Informatics Assoc. 29 (12) (2022)
Wenrui Dai, Xiaoqian Jiang, Luca Bonomi, Yong Li, Hongkai Xiong, Lucila Ohno-Machado
VERTICOX: Vertically Distributed Cox Proportional Hazards Model Using the Alternating Direction Method of Multipliers. IEEE Trans. Knowl. Data Eng. 34 (2) (2022)
Xiaoqian Jiang, Luca Bonomi, Jaideep Vaidya, Li Xiong, Lucila Ohno-Machado
Privacy-Preserving Federated Biomedical Data Analysis. AMIA (2021)
Jihoon Kim, Larissa Neumann, Paulina Paul, Michele E. Day, Michael Aratow, Douglas S. Bell, Jason N. Doctor, Ludwig Christian G. Hinske, Xiaoqian Jiang, Katherine K. Kim, Michael E. Matheny, Daniella Meeker, Mark J. Pletcher, Lisa M. Schilling, Spencer L. SooHoo, Hua Xu, Kai Zheng, Lucila Ohno-Machado
Privacy-protecting, reliable response data discovery using COVID-19 patient observations. J. Am. Medical Informatics Assoc. 28 (8) (2021)
Xu Zuo, Yong Chen, Lucila Ohno-Machado, Hua Xu
How do we share data in COVID-19 research? A systematic review of COVID-19 datasets in PubMed Central Articles. Briefings Bioinform. 22 (2) (2021)
Tsung-Ting Kuo, Tyler Bath, Shuaicheng Ma, Nicholas Pattengale, Meng Yang, Yang Cao, Corey M. Hudson, Jihoon Kim, Kai Post, Li Xiong, Lucila Ohno-Machado
Benchmarking blockchain-based gene-drug interaction data sharing methods: A case study from the iDASH 2019 secure genome analysis competition blockchain track. Int. J. Medical Informatics 154 (2021)
Subha Madhavan, Lisa Bastarache, Jeffrey S. Brown, Atul J. Butte, David A. Dorr, Peter J. Embí, Charles P. Friedman, Kevin B. Johnson, Jason H. Moore, Isaac S. Kohane, Philip R. O. Payne, Jessica D. Tenenbaum, Mark G. Weiner, Adam B. Wilcox, Lucila Ohno-Machado
Use of electronic health records to support a public health response to the COVID-19 pandemic in the United States: a perspective from 15 academic medical centers. J. Am. Medical Informatics Assoc. 28 (2) (2021)
Anh Pham, Robert El-Kareh, Lucila Ohno-Machado, Tsung-Ting Kuo
Early Prediction of Positive Clostridioides Difficile Test Results. AMIA (2021)
Yingxiang Huang, Xiaoqian Jiang, Rodney A. Gabriel, Lucila Ohno-Machado
Calibrating predictive model estimates in a distributed network of patient data. J. Biomed. Informatics 117 (2021)
Jihoon Kim, Paulina Paul, Pravina Kota, Yu R. Park, Julie A. Stoner, Wenyu Wang, Ying Zhang, Elisa Lee, Lucila Ohno-Machado
Longitudinal Cohort Data Transformation Based on a Common Data Model and Metadata Standards: Examples from the Strong Heart Study. AMIA (2020)
Yingxiang Huang, Wentao Li, Fima Macheret, Rodney A. Gabriel, Lucila Ohno-Machado
A tutorial on calibration measurements and calibration models for clinical prediction models. J. Am. Medical Informatics Assoc. 27 (4) (2020)
Riley Taitingfong, Cinnamon S. Bloss, Cynthia Triplett, Julie Cakici, Nanibaa' Garrison, Shelley Cole, Julie A. Stoner, Lucila Ohno-Machado
A systematic literature review of Native American and Pacific Islanders' perspectives on health data privacy in the United States. J. Am. Medical Informatics Assoc. 27 (12) (2020)
Luca Bonomi, Xiaoqian Jiang, Lucila Ohno-Machado
Protecting patient privacy in survival analyses. J. Am. Medical Informatics Assoc. 27 (3) (2020)
Jason N. Doctor, Jaideep Vaidya, Xiaoqian Jiang, Shuang Wang, Lisa M. Schilling, Toan Ong, Michael E. Matheny, Lucila Ohno-Machado, Daniella Meeker
Efficient determination of equivalence for encrypted data. Comput. Secur. 97 (2020)
Tsung-Ting Kuo, Rodney A. Gabriel, Krishna R. Cidambi, Lucila Ohno-Machado
EXpectation Propagation LOgistic REgRession on permissioned blockCHAIN (ExplorerChain): decentralized online healthcare/genomics predictive model learning. J. Am. Medical Informatics Assoc. 27 (5) (2020)
Miran Kim, Junghye Lee, Lucila Ohno-Machado, Xiaoqian Jiang
Secure and Differentially Private Logistic Regression for Horizontally Distributed Data. IEEE Trans. Inf. Forensics Secur. 15 (2020)
Sally L. Baxter, Helena E. Gali, Michael F. Chiang, Michelle R. Hribar, Lucila Ohno-Machado, Robert El-Kareh, Abigail E. Huang, Heather E. Chen, Andrew Camp, Don O. Kikkawa, Bobby S. Korn, Jeffrey E. Lee, Christopher A. Longhurst, Marlene Millen
Promoting Quality Face-to-Face Communication during Ophthalmology Encounters in the Electronic Health Record Era. Appl. Clin. Inform. 11 (01) (2020)
Xiao Dong, Jianfu Li, Ekin Soysal, Jiang Bian, Scott L. DuVall, Elizabeth Hanchrow, Hongfang Liu, Kristine E. Lynch, Michael E. Matheny, Karthik Natarajan, Lucila Ohno-Machado, Serguei Pakhomov, Ruth Madeleine Reeves, Amy M. Sitapati, Swapna Abhyankar, Theresa Cullen, Jami Deckard, Xiaoqian Jiang, Robert Murphy, Hua Xu
COVID-19 TestNorm: A tool to normalize COVID-19 testing names to LOINC codes. J. Am. Medical Informatics Assoc. 27 (9) (2020)
Yong Kyung Choi, Javier E. Lopez, Daniella Meeker, Lucila Ohno-Machado, Katherine K. Kim
Engaging heart failure patients from a clinical data research network: A survey on willingness to participate in different types of research. AMIA (2019)
Xiaoqian Jiang, Luca Bonomi, Lucila Ohno-Machado
VERTICOX: Vertically Distributed Cox Proportional Hazards Model. AMIA (2019)
Tsung-Ting Kuo, Hugo Zavaleta Rojas, Lucila Ohno-Machado
Comparison of blockchain platforms: a systematic review and healthcare examples. J. Am. Medical Informatics Assoc. 26 (5) (2019)
Olivier Harismendy, Jihoon Kim, Xiaojun Xu, Lucila Ohno-Machado
Evaluating and sharing global genetic ancestry in biomedical datasets. J. Am. Medical Informatics Assoc. 26 (5) (2019)
Tsung-Ting Kuo, Rodney A. Gabriel, Lucila Ohno-Machado
Fair compute loads enabled by blockchain: sharing models by alternating client and server roles. J. Am. Medical Informatics Assoc. 26 (5) (2019)
Tsung-Ting Kuo, Amar Das, Kim Augustine, Peng Dana Zhang, Lucila Ohno-Machado
Current Applications of Blockchain Technology in Biomedical Research and Healthcare. AMIA (2019)
Luca Bonomi, Xiaoqian Jiang, Lucila Ohno-Machado
Protecting Patient Privacy in Survival Analyses. AMIA (2019)
Lucila Ohno-Machado
The role of informatics in promoting patient safety. J. Am. Medical Informatics Assoc. 25 (7) (2018)
Lucila Ohno-Machado
Informatics for all: from provider- to patient-based applications that can include family and friends. J. Am. Medical Informatics Assoc. 25 (8) (2018)
Lucila Ohno-Machado
Informatics systems for health care providers, patients, and families. J. Am. Medical Informatics Assoc. 25 (2) (2018)
Xiaoling Chen, Anupama E. Gururaj, Ibrahim Burak Özyurt, Ruiling Liu, Ergin Soysal, Trevor Cohen, Firat Tiryaki, Yueling Li, Nansu Zong, Min Jiang, Deevakar Rogith, Mandana Salimi, Hyeon-Eui Kim, Philippe Rocca-Serra, Alejandra N. González-Beltrán, Claudiu Farcas, Todd Johnson, Ronald Margolis, George Alter, Susanna-Assunta Sansone, Ian Fore, Lucila Ohno-Machado, Jeffrey S. Grethe, Hua Xu
DataMed - an open source discovery index for finding biomedical datasets. J. Am. Medical Informatics Assoc. 25 (3) (2018)
Tsung-Ting Kuo, Jina Huh, Jihoon Kim, Robert E. El-Kareh, Siddharth Singh, Stephanie Feudjio Feupe, Vincent Kuri, Gordon Lin, Michele E. Day, Lucila Ohno-Machado, Chun-Nan Hsu
The Impact of Automatic Pre-annotation in Clinical Note Data Element Extraction - the CLEAN Tool. CoRR (2018)
Lucila Ohno-Machado
Reflections on the journey of editing a scientific journal. J. Am. Medical Informatics Assoc. 25 (12) (2018)
Lucila Ohno-Machado
Clinical decision support: informatics interventions for better patient care. J. Am. Medical Informatics Assoc. 25 (5) (2018)
Lucila Ohno-Machado
A diversified informatics portfolio covering health sciences and healthcare. J. Am. Medical Informatics Assoc. 25 (12) (2018)
Lucila Ohno-Machado
Clinical informatics applications of medication reconciliation, decision support systems, and online portal patient-provider communications. J. Am. Medical Informatics Assoc. 25 (11) (2018)
Feng Chen, Xiaoqian Jiang, Shuang Wang, Lisa M. Schilling, Daniella Meeker, Toan Ong, Michael E. Matheny, Jason N. Doctor, Lucila Ohno-Machado, Jaideep Vaidya
Perfectly Secure and Efficient Two-Party Electronic-Health-Record Linkage. IEEE Internet Comput. 22 (2) (2018)
Lucila Ohno-Machado
Special Focus on Biomedical Data Science. J. Am. Medical Informatics Assoc. 25 (1) (2018)
Ram Dixit, Deevakar Rogith, Vidya Narayana, Mandana Salimi, Anupama E. Gururaj, Lucila Ohno-Machado, Hua Xu, Todd R. Johnson
User needs analysis and usability assessment of DataMed - a biomedical data discovery index. J. Am. Medical Informatics Assoc. 25 (3) (2018)
Lucila Ohno-Machado
Clinical research informatics: a growing subspecialization of biomedical informatics. J. Am. Medical Informatics Assoc. 25 (3) (2018)
Lucila Ohno-Machado
Data science and artificial intelligence to improve clinical practice and research. J. Am. Medical Informatics Assoc. 25 (10) (2018)
Wei Wei, Zhanglong Ji, Yupeng He, Kai Zhang, Yuanchi Ha, Qi Li, Lucila Ohno-Machado
Finding relevant biomedical datasets: the UC San Diego solution for the bioCADDIE Retrieval Challenge. Database J. Biol. Databases Curation 2018 (2018)
Lucila Ohno-Machado
Electronic health records and health information exchange. J. Am. Medical Informatics Assoc. 25 (6) (2018)
Lucila Ohno-Machado
Enabling patients to be active participants in healthcare via informatics interventions. J. Am. Medical Informatics Assoc. 25 (4) (2018)
Tsung-Ting Kuo, Lucila Ohno-Machado
ModelChain: Decentralized Privacy-Preserving Healthcare Predictive Modeling Framework on Private Blockchain Networks. CoRR (2018)
Lucila Ohno-Machado
Sharing data from electronic health records within, across, and beyond healthcare institutions: Current trends and perspectives. J. Am. Medical Informatics Assoc. 25 (9) (2018)
Patricia Flatley Brennan, Michael F. Chiang, Lucila Ohno-Machado
Biomedical informatics and data science: evolving fields with significant overlap. J. Am. Medical Informatics Assoc. 25 (1) (2018)
Jason N. Doctor, Jaideep Vaidya, Xiaoqian Jiang, Shuang Wang, Lisa M. Schilling, Toan Ong, Michael E. Matheny, Lucila Ohno-Machado, Daniella Meeker
Efficient Determination of Equivalence for Encrypted Data. CoRR (2018)
Lucila Ohno-Machado
Electronic health records: usability and utilization by health care providers and patients. J. Am. Medical Informatics Assoc. 24 (e1) (2017)
Trevor Cohen, Kirk Roberts, Anupama E. Gururaj, Xiaoling Chen, Saeid Pournejati, George Alter, William R. Hersh, Dina Demner-Fushman, Lucila Ohno-Machado, Hua Xu
A publicly available benchmark for biomedical dataset retrieval: the reference standard for the 2016 bioCADDIE dataset retrieval challenge. Database J. Biol. Databases Curation 2017 (2017)
Lucila Ohno-Machado
JAMIA is going green. J. Am. Medical Informatics Assoc. 24 (6) (2017)
Lucila Ohno-Machado
Advancing healthcare and biomedical research via new data-driven approaches. J. Am. Medical Informatics Assoc. 24 (3) (2017)
Kathleen M. Jagodnik, Simon Koplev, Sherry L. Jenkins, Lucila Ohno-Machado, Benedict Paten, Stephan C. Schürer, Michel Dumontier, Ruben Verborgh, Alex Bui, Peipei Ping, Neil J. McKenna, Ravi K. Madduri, Ajay Pillai, Avi Ma'ayan
Developing a framework for digital objects in the Big Data to Knowledge (BD2K) commons: Report from the Commons Framework Pilots workshop. J. Biomed. Informatics 71 (2017)
Hyeoneui Kim, Elizabeth A. Bell, Jihoon Kim, Amy M. Sitapati, Joe Ramsdell, Claudiu Farcas, Dexter Friedman, Stephanie Feudjio Feupe, Lucila Ohno-Machado
iCONCUR: informed consent for clinical data and bio-sample use for research. J. Am. Medical Informatics Assoc. 24 (2) (2017)
Hanna Suominen, Henning Müller, Lucila Ohno-Machado, Sanna Salanterä, Günter Schreier, Leif Hanlen
Prerequisites for International Exchanges of Health Information for Record Research: Comparison of Australian, Austrian, Finnish, Swiss, and US Policies. MedInfo (2017)
Jean Louis Raisaro, Florian Tramèr, Zhanglong Ji, Diyue Bu, Yongan Zhao, W. Knox Carey, David D. Lloyd, Heidi Sofia, Dixie Baker, Paul Flicek, Suyash S. Shringarpure, Carlos D. Bustamante, Shuang Wang, Xiaoqian Jiang, Lucila Ohno-Machado, Haixu Tang, XiaoFeng Wang, Jean-Pierre Hubaux
Addressing Beacon re-identification attacks: quantification and mitigation of privacy risks. J. Am. Medical Informatics Assoc. 24 (4) (2017)
Xiaoqian Jiang, Claudiu Farcas, Benedict Paten, Mark Diekhans, Paul Avillach, Wallace Wadge, David Haussler, Lucila Ohno-Machado, Ida Sim
Count Everything: Secure Count Query Framework Across Big Data Centers. CRI (2017)
Lucila Ohno-Machado
Using health information technology for clinical decision support and predictive analytics. J. Am. Medical Informatics Assoc. 24 (1) (2017)
Lucila Ohno-Machado
Health information technology and patient safety. J. Am. Medical Informatics Assoc. 24 (2) (2017)
Christian Hinske, Felipe R. C. dos Santos, Daniel T. Ohara, Lucila Ohno-Machado, Simone Kreth, Pedro A. F. Galante
MiRIAD update: using alternative polyadenylation, protein interaction network analysis and additional species to enhance exploration of the role of intragenic miRNAs and their host genes. Database J. Biol. Databases Curation 2017 (2017)
Jaideep Vaidya, Basit Shafiq, Muazzam Asani, Nabil R. Adam, Xiaoqian Jiang, Lucila Ohno-Machado
A Scalable Privacy-preserving Data Generation Methodology for Exploratory Analysis. AMIA (2017)
Feng Chen, Shuang Wang, Xiaoqian Jiang, Sijie Ding, Yao Lu, Jihoon Kim, Süleyman Cenk Sahinalp, Chisato Shimizu, Jane C. Burns, Victoria J. Wright, Eileen Png, Martin L. Hibberd, David D. Lloyd, Hai Yang, Amalio Telenti, Cinnamon S. Bloss, Dov Fox, Kristin E. Lauter, Lucila Ohno-Machado
PRINCESS: Privacy-protecting Rare disease International Network Collaboration via Encryption through Software guard extensionS. Bioinform. 33 (6) (2017)
Lucila Ohno-Machado
Education of informatics professionals and development of electronic information resources for clinicians, patients, health scientists, and study participants. J. Am. Medical Informatics Assoc. 24 (4) (2017)
Jonathan Wickes, Hyeoneui Kim, Hyun-Dae Kim, Jihoon Kim, Wenhong Zhu, Lucila Ohno-Machado, Olivier Harismendy
Project A-G-T-C: Adding Genetic Test data in Clinical data warehouse. AMIA (2017)
Elizabeth A. Bell, Diana Guijarro, Imho Jang, Wenhong Zhu, Tyler Bath, Gwangnoh Yun, Masud Rahman, Chao Jiang, Xiaoqian Jiang, Lucila Ohno-Machado, Hyeoneui Kim
Honoring Patient's Data Sharing Preferences: Implementation Challenges. AMIA (2017)
Tsung-Ting Kuo, Hyeon-Eui Kim, Lucila Ohno-Machado
Blockchain distributed ledger technologies for biomedical and health care applications. J. Am. Medical Informatics Assoc. 24 (6) (2017)
Kirk Roberts, Anupama E. Gururaj, Xiaoling Chen, Saeid Pournejati, Trevor Cohen, William R. Hersh, Dina Demner-Fushman, Lucila Ohno-Machado, Hua Xu
Information Retrieval for Biomedical Datasets: The 2016 bioCADDIE Challenge. AMIA (2017)
Kirk Roberts, Anupama E. Gururaj, Xiaoling Chen, Saeid Pournejati, William R. Hersh, Dina Demner-Fushman, Lucila Ohno-Machado, Trevor Cohen, Hua Xu
Information retrieval for biomedical datasets: the 2016 bioCADDIE dataset retrieval challenge. Database J. Biol. Databases Curation 2017 (2017)
Lucila Ohno-Machado
Understanding and mitigating the digital divide in health care. J. Am. Medical Informatics Assoc. 24 (5) (2017)
Wei Wei, Zhanglong Ji, Lucila Ohno-Machado
Using a Convolutional Neural Network for Automatic Medical Subject Headings (MeSH) Assignment. AMIA (2017)
Katherine K. Kim, Lucila Ohno-Machado
Consumer Views of Electronic Health and Genetic Data Sharing: Findings of a National Survey. AMIA (2017)
Meng Wang, Zhanglong Ji, Shuang Wang, Jihoon Kim, Hai Yang, Xiaoqian Jiang, Lucila Ohno-Machado
Mechanisms to protect the privacy of families when using the transmission disequilibrium test in genome-wide association studies. Bioinform. 33 (23) (2017)
Xiaoling Chen, Jun Xu, Jingqi Wang, Anupama E. Gururaj, Lucila Ohno-Machado, Hua Xu
A Natural Language Processing System for Biomedical Dataset Retrieval. AMIA (2017)
Douglas S. Bell, Lisa Dahm, Nick R. Anderson, Ida Sim, Pralav P. Dessai, Marianne Zachariah, Lucila Ohno-Machado
Self-Service Cohort Discovery across Five Academic Health Centers: Usage and User Evaluations of the University of California Research eXchange. AMIA (2017)
Chao Jiang, Xiaoqian Jiang, Shuang Wang, Diana Guijarro, Elizabeth A. Bell, Imho Jang, Gwangnoh Yun, Masud Rahman, Lucila Ohno-Machado, Hyeoneui Kim
MALTASE: a Mobile AppLication To improve patients' Access to their data Sharing preferencE. AMIA (2017)
Ram Dixit, Deevakar Rogith, Vidya Narayana, Mandana Salimi, Anupama E. Gururaj, Lucila Ohno-Machado, Hua Xu, Todd R. Johnson
Meeting User Needs for a Data Discovery Index of Biomedical Big Data. AMIA (2017)
Wei Wei, Zhanglong Ji, Lucila Ohno-Machado
Using the hierarchical structure of the Medical Subject Headings (MeSH) for automatic MeSH term assignment. AMIA (2016)
Imho Jang, Diana Guijarro, Jimmy Quach, Jihoon Kim, Hyeon-Eui Kim, Elizabeth A. Bell, Robert E. El-Kareh, Lucila Ohno-Machado
Does Health Status Affect Patient Preferences for Sharing Clinical Data for Research? AMIA (2016)
Lucila Ohno-Machado
A message to the next generation of biomedical informatics professionals. J. Am. Medical Informatics Assoc. 23 (2) (2016)
Hyeon-Eui Kim, Jeeyae Choi, Imho Jang, Jimmy Quach, Lucila Ohno-Machado
Feasibility of Representing Data from Published Nursing Research Using the OMOP Common Data Model. AMIA (2016)
Lucila Ohno-Machado
Data and the clinical decision support loop. J. Am. Medical Informatics Assoc. 23 (e1) (2016)
Michael E. Matheny, Dax M. Westerman, Laura Pearlman, Josh Gieringer, Xiaoqian Jiang, Claudiu Farcas, Tara K. Knight, Shuang Wang, Amy Perkins, Lucila Ohno-Machado, Bill Clarke, Daniella Meeker
An Integrated Privacy Preserving Collaborative Analytics Platform: The PCORnet pSCANNER-PopMedNet TM Software Suite. AMIA (2016)
Hua Xu, Jeffrey S. Grethe, Xiaoling Chen, Ruiling Liu, Ergin Soysal, Anupama E. Gururaj, Yueling Li, Ibrahim Burak Özyurt, Hyeon-Eui Kim, Trevor Cohen, Todd R. Johnson, Mandana Salimi, Saeid Pournejati, Min Jiang, Claudiu Farcas, Alejandra N. González-Beltrán, Philippe Rocca-Serra, Muhamamd F. Amith, Cui Tao, Ian Fore, Ronald Margolis, George Alter, Susanna-Assunta Sansone, Lucila Ohno-Machado
Development of DataMed, a Data Discovery Index Prototype by bioCADDIE: Laying the Groundwork for Biomedical Data Discovery. AMIA (2016)
Tsung-Ting Kuo, Pallavi Rao, Cleo K. Maehara, Son Doan, Juan D. Chaparro, Michele E. Day, Claudiu Farcas, Lucila Ohno-Machado, Chun-Nan Hsu
Ensembles of NLP Tools for Data Element Extraction from Clinical Notes. AMIA (2016)
Jeffrey S. Grethe, Ibrahim Burak Özyurt, Hua Xu, Xiaoling Chen, Ruiling Liu, Ergin Soysal, Anupama E. Gururaj, Hyeon-Eui Kim, Trevor Cohen, Todd R. Johnson, Mandana Salimi, Saeid Pournejati, Min Jiang, Claudiu Farcas, Alejandra N. González-Beltrán, Philippe Rocca-Serra, Muhamamd F. Amith, Cui Tao, Ian Fore, Ronald Margolis, George Alter, Susanna-Assunta Sansone, Lucila Ohno-Machado
A Scalable Dataset Indexing Infrastructure for the bioCADDIE Data Discovery System. AMIA (2016)

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Lucila Ohno-Machado