Henning Müller

ORCID

Publication Activity (10 Years)

Years Active: 1998-2024
Publications (10 Years): 226

Top Venues

Berlin Institute of Technology (PHD)

Education History

Berlin Institute of Technology

PHD

Publications

Nicola Ferro, Julio Gonzalo, Jussi Karlgren, Henning Müller
The CLEF 2024 Monster Track: One Lab to Rule Them All. ECIR (6) (2024)
Marek Wodzinski, Niccolò Marini, Manfredo Atzori, Henning Müller
DeeperHistReg: Robust Whole Slide Images Registration Framework. CoRR (2024)
Juan Pedro Dominguez-Morales, Lourdes Duran-Lopez, Niccolò Marini, Saturnino Vicente Diaz, Alejandro Linares-Barranco, Manfredo Atzori, Henning Müller
A systematic comparison of deep learning methods for Gleason grading and scoring. Medical Image Anal. 95 (2024)
Niccolò Marini, Stefano Marchesin, Lluis Borras Ferris, Simon Püttmann, Marek Wodzinski, Riccardo Fratti, Damian Podareanu, Alessandro Caputo, Svetla Boytcheva, Simona Vatrano, Filippo Fraggetta, Iris Nagtegaal, Gianmaria Silvello, Manfredo Atzori, Henning Müller
Automatic Labels are as Effective as Manual Labels in Biomedical Images Classification with Deep Learning. CoRR (2024)
Marek Wodzinski, Niccolò Marini, Manfredo Atzori, Henning Müller
RegWSI: Whole slide image registration using combined deep feature- and intensity-based methods: Winner of the ACROBAT 2023 challenge. Comput. Methods Programs Biomed. 250 (2024)
Philippe Weitz, Masi Valkonen, Leslie Solorzano, Circe Carr, Kimmo Kartasalo, Constance Boissin, Sonja Koivukoski, Aino Kuusela, Dusan Rasic, Yanbo Feng, Sandra Kristiane Sinius Pouplier, Abhinav Sharma, Kajsa Ledesma Eriksson, Stephanie Robertson, Christian Marzahl, Chandler D. Gatenbee, Alexander R. A. Anderson, Marek Wodzinski, Artur Jurgas, Niccolò Marini, Manfredo Atzori, Henning Müller, Daniel Budelmann, Nick Weiss, Stefan Heldmann, Johannes Lotz, Jelmer M. Wolterink, Bruno De Santi, Abhijeet Patil, Amit Sethi, Satoshi Kondo, Satoshi Kasai, Kousuke Hirasawa, Mahtab Farrokh, Neeraj Kumar, Russell Greiner, Leena Latonen, Anne-Vibeke Laenkholm, Johan Hartman, Pekka Ruusuvuori, Mattias Rantalainen
The ACROBAT 2022 challenge: Automatic registration of breast cancer tissue. Medical Image Anal. 97 (2024)
Zhuxian Guo, Amine Marzouki, Jean-François Emile, Henning Müller, Camille Kurtz, Nicolas Loménie
Lymphoid Infiltration Assessment of the Tumor Margins in H&E Slides. CoRR (2024)
Alexis Joly, Lukás Picek, Stefan Kahl, Hervé Goëau, Vincent Espitalier, Christophe Botella, Benjamin Deneu, Diego Marcos, Joaquim Estopinan, César Leblanc, Théo Larcher, Milan Sulc, Marek Hrúz, Maximilien Servajean, Jirí Matas, Hervé Glotin, Robert Planqué, Willem-Pier Vellinga, Holger Klinck, Tom Denton, Andrew M. Durso, Ivan Eggel, Pierre Bonnet, Henning Müller
LifeCLEF 2024 Teaser: Challenges on Species Distribution Prediction and Identification. ECIR (6) (2024)
Marek Wodzinski, Niccolò Marini, Manfredo Atzori, Henning Müller
RegWSI: Whole Slide Image Registration using Combined Deep Feature- and Intensity-Based Methods: Winner of the ACROBAT 2023 Challenge. CoRR (2024)
Marek Wodzinski, Henning Müller
Patch-Based Encoder-Decoder Architecture for Automatic Transmitted Light to Fluorescence Imaging Transition: Contribution to the LightMyCells Challenge. CoRR (2024)
Bogdan Ionescu, Henning Müller, Ana-Maria Claudia Dragulinescu, Ahmad Idrissi-Yaghir, Ahmedkhan Radzhabov, Alba Garcia Seco de Herrera, Alexandra Andrei, Alexandru Stan, Andrea M. Storås, Asma Ben Abacha, Benjamin Lecouteux, Benno Stein, Cécile Macaire, Christoph M. Friedrich, Cynthia S. Schmidt, Didier Schwab, Emmanuelle Esperança-Rodier, George Ioannidis, Griffin Adams, Henning Schäfer, Hugo Manguinhas, Ioan Coman, Johanna Schöler, Johannes Kiesel, Johannes Rückert, Louise Bloch, Martin Potthast, Maximilian Heinrich, Meliha Yetisgen, Michael A. Riegler, Neal Snider, Pål Halvorsen, Raphael Brüngel, Steven Alexander Hicks, Vajira Thambawita, Vassili Kovalev, Yuri Prokopchuk, Wen-wai Yim
Advancing Multimedia Retrieval in Medical, Social Media and Content Recommendation Applications with ImageCLEF 2024. ECIR (6) (2024)
Johannes Rückert, Louise Bloch, Raphael Brüngel, Ahmad Idrissi-Yaghir, Henning Schäfer, Cynthia S. Schmidt, Sven Koitka, Obioma Pelka, Asma Ben Abacha, Alba García Seco de Herrera, Henning Müller, Peter A. Horn, Felix Nensa, Christoph M. Friedrich
ROCOv2: Radiology Objects in COntext Version 2, an Updated Multimodal Image Dataset. CoRR (2024)
Mario Martínez-Zarzuela, David González Ortega, Míriam Antón-Rodríguez, Francisco Javier Díaz Pernas, Henning Müller, Cristina Simon-Martinez
A comparative study on wearables and single-camera video for upper-limb out-of-thelab activity recognition with different deep learning architectures. CoRR (2024)
Nataliia Molchanova, Alessandro Cagol, Pedro M. Gordaliza, Mario Ocampo-Pineda, Po-Jui Lu, Matthias Weigel, Xinjie Chen, Adrien Depeursinge, Cristina Granziera, Henning Müller, Meritxell Bach Cuadra
Interpretability of Uncertainty: Exploring Cortical Lesion Segmentation in Multiple Sclerosis. CoRR (2024)
Johannes Rückert, Asma Ben Abacha, Alba Garcia Seco de Herrera, Louise Bloch, Raphael Brüngel, Ahmad Idrissi-Yaghir, Henning Schäfer, Benjamin Bracke, Hendrik Damm, Tabea Margareta Grace Pakull, Cynthia Sabrina Schmidt, Henning Müller, Christoph M. Friedrich
Overview of ImageCLEFmedical 2024 - Caption Prediction and Concept Detection. CLEF (Working Notes) (2024)
Alexandra-Georgiana Andrei, Ahmedkhan Radzhabov, Dzmitry Karpenka, Yuri Prokopchuk, Vassili Kovalev, Bogdan Ionescu, Henning Müller
Overview of the 2024 ImageCLEFmedical GANs Task - Investigating Generative Models' Impact on Biomedical Synthetic Images. CLEF (Working Notes) (2024)
Artur Jurgas, Marek Wodzinski, Marina D'Amato, Jeroen van der Laak, Manfredo Atzori, Henning Müller
Improving Quality Control of Whole Slide Images by Explicit Artifact Augmentation. CoRR (2024)
Bogdan Ionescu, Henning Müller, Ana-Maria Dragulinescu, Wen-wai Yim, Asma Ben Abacha, Neal Snider, Griffin Adams, Meliha Yetisgen, Johannes Rückert, Alba García Seco de Herrera, Christoph M. Friedrich, Louise Bloch, Raphael Brüngel, Ahmad Idrissi-Yaghir, Henning Schäfer, Steven Alexander Hicks, Michael A. Riegler, Vajira Thambawita, Andrea M. Storås, Pål Halvorsen, Nikolaos Papachrysos, Johanna Schöler, Debesh Jha, Alexandra-Georgiana Andrei, Ioan Coman, Vassili Kovalev, Ahmedkhan Radzhabov, Yuri Prokopchuk, Liviu-Daniel Stefan, Mihai Gabriel Constantin, Mihai Dogariu, Jérôme Deshayes, Adrian Popescu
Overview of the ImageCLEF 2023: Multimedia Retrieval in Medical, Social Media and Internet Applications. CLEF (2023)
Kaiyuan Yang, Fabio Musio, Yihui Ma, Norman Juchler, Johannes C. Paetzold, Rami Al-Maskari, Luciano Höher, Hongwei Bran Li, Ibrahim Ethem Hamamci, Anjany Sekuboyina, Suprosanna Shit, Houjing Huang, Diana Waldmannstetter, Florian Kofler, Fernando Navarro, Martin J. Menten, Ivan Ezhov, Daniel Rueckert, Iris N. Vos, Ynte M. Ruigrok, Birgitta K. Velthuis, Hugo J. Kuijf, Julien Hämmerli, Catherine Wurster, Philippe Bijlenga, Laura Westphal, Jeroen Bisschop, Elisa Colombo, Hakim Baazaoui, Andrew Makmur, James Hallinan, Benedikt Wiestler, Jan S. Kirschke, Roland Wiest, Emmanuel Montagnon, Laurent Létourneau-Guillon, Adrian Galdran, Francesco Galati, Daniele Falcetta, Maria A. Zuluaga, Chaolong Lin, Haoran Zhao, Zehan Zhang, Sinyoung Ra, Jongyun Hwang, Hyunjin Park, Junqiang Chen, Marek Wodzinski, Henning Müller, et al.
Benchmarking the CoW with the TopCoW Challenge: Topology-Aware Anatomical Segmentation of the Circle of Willis for CTA and MRA. CoRR (2023)
Anjani Dhrangadhariya, Wojciech Kusa, Henning Müller, Allan Hanbury
HEVS-TUW at SemEval-2023 Task 8: Ensemble of Language Models and Rule-based Classifiers for Claims Identification and PICO Extraction. SemEval@ACL (2023)
Alexandra-Georgiana Andrei, Ahmedkhan Radzhabov, Ioan Coman, Vassili Kovalev, Bogdan Ionescu, Henning Müller
Overview of ImageCLEFmedical GANs 2023 Task - Identifying Training Data "Fingerprints" in Synthetic Biomedical Images Generated by GANs for Medical Image Security. CLEF (Working Notes) (2023)
Artur Jurgas, Marek Wodzinski, Weronika Celniak, Manfredo Atzori, Henning Müller
Artifact Augmentation for Learning-based Quality Control of Whole Slide Images. EMBC (2023)
Laura O'Mahony, Vincent Andrearczyk, Henning Müller, Mara Graziani
Disentangling Neuron Representations with Concept Vectors. CVPR Workshops (2023)
Alexis Joly, Hervé Goëau, Stefan Kahl, Lukás Picek, Christophe Botella, Diego Marcos, Milan Sulc, Marek Hrúz, Titouan Lorieul, Sara Si Moussi, Maximilien Servajean, Benjamin Kellenberger, Elijah Cole, Andrew Durso, Hervé Glotin, Robert Planqué, Willem-Pier Vellinga, Holger Klinck, Tom Denton, Ivan Eggel, Pierre Bonnet, Henning Müller
LifeCLEF 2023 Teaser: Species Identification and Prediction Challenges. ECIR (3) (2023)
Zhuxian Guo, Qitong Wang, Henning Müller, Themis Palpanas, Nicolas Loménie, Camille Kurtz
A Hierarchical Transformer Encoder to Improve Entire Neoplasm Segmentation on Whole Slide Images of Hepatocellular Carcinoma. ISBI (2023)
Vatsal Raina, Nataliia Molchanova, Mara Graziani, Andrey Malinin, Henning Müller, Meritxell Bach Cuadra, Mark J. F. Gales
Tackling Bias in the Dice Similarity Coefficient: Introducing nDSC for White Matter Lesion Segmentation. CoRR (2023)
Artur Jurgas, Marek Wodzinski, Manfredo Atzori, Henning Müller
Robust Multiresolution and Multistain Background Segmentation in Whole Slide Images. PCBBE (2023)
Alessandro Scano, Néstor J. Jarque-Bou, Cristina Brambilla, Manfredo Atzori, Andrea d'Avella, Henning Müller
Functional Synergies Applied to a Publicly Available Dataset of Hand Grasps Show Evidence of Kinematic-Muscular Synergistic Control. IEEE Access 11 (2023)
Laura O'Mahony, Vincent Andrearczyk, Henning Müller, Mara Graziani
Disentangling Neuron Representations with Concept Vectors. CoRR (2023)
Lukas Hesse, Maik Fruhner, Heiko Tapken, Henning Müller
Computer-Vision-basierte Aktivitätserkennung bei Schweinen. GIL Jahrestagung (2023)
Marek Wodzinski, Henning Müller
Automatic Aorta Segmentation with Heavily Augmented, High-Resolution 3-D ResUNet: Contribution to the SEG.A Challenge. SEG.A@MICCAI (2023)
Annika Reinke, Minu Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A. Emre Kavur, Tim Rädsch, Carole H. Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B. Blaschko, Florian Büttner, M. Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A. Cimini, Gary S. Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Robert Haase, Daniel A. Hashimoto, Michael M. Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E. Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Hannes Kenngott, Jens Kleesiek, Florian Kofler, Thijs Kooi, Annette Kopp-Schneider, Michal Kozubek, Anna Kreshuk, Tahsin M. Kurç, Bennett A. Landman, Geert Litjens, Amin Madani, Klaus H. Maier-Hein, Anne L. Martel, Peter Mattson, Erik Meijering, Bjoern H. Menze, Karel G. M. Moons, Henning Müller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M. Rafelski, Nasir M. Rajpoot, Mauricio Reyes, Michael A. Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I. Sánchez, Shravya Shetty, Maarten van Smeden, Ronald M. Summers, Abdel A. Taha, Aleksei Tiulpin, Sotirios A. Tsaftaris, Ben Van Calster, Gaël Varoquaux, Manuel Wiesenfarth, Ziv R. Yaniv, Paul F. Jäger, Lena Maier-Hein
Understanding metric-related pitfalls in image analysis validation. CoRR (2023)
Vatsal Raina, Nataliia Molchanova, Mara Graziani, Andrey Malinin, Henning Müller, Meritxell Bach Cuadra, Mark J. F. Gales
Tackling Bias in the Dice Similarity Coefficient: Introducing NDSC for White Matter Lesion Segmentation. ISBI (2023)
Selene Tomassini, Nicola Falcionelli, Giulia Bruschi, Agnese Sbrollini, Niccolò Marini, Paolo Sernani, Micaela Morettini, Henning Müller, Aldo Franco Dragoni, Laura Burattini
On-cloud decision-support system for non-small cell lung cancer histology characterization from thorax computed tomography scans. Comput. Medical Imaging Graph. 110 (2023)
Johannes Rückert, Asma Ben Abacha, Alba Garcia Seco de Herrera, Louise Bloch, Raphael Brüngel, Ahmad Idrissi-Yaghir, Henning Schäfer, Henning Müller, Christoph M. Friedrich
Overview of ImageCLEFmedical 2023 - Caption Prediction and Concept Detection. CLEF (Working Notes) (2023)
Alexander Schlüter, Henning Müller, Sikang Yan, Erik Faust, Ralf Müller
A Lattice Boltzmann Method for Elastic Solids Under Plane Strain Deformation. CoRR (2023)
Alexis Joly, Christophe Botella, Lukás Picek, Stefan Kahl, Hervé Goëau, Benjamin Deneu, Diego Marcos, Joaquim Estopinan, César Leblanc, Théo Larcher, Rail Chamidullin, Milan Sulc, Marek Hrúz, Maximilien Servajean, Hervé Glotin, Robert Planqué, Willem-Pier Vellinga, Holger Klinck, Tom Denton, Ivan Eggel, Pierre Bonnet, Henning Müller
Overview of LifeCLEF 2023: Evaluation of AI Models for the Identification and Prediction of Birds, Plants, Snakes and Fungi. CLEF (2023)
José Pereira Amorim, Pedro Henriques Abreu, João A. M. Santos, Henning Müller
Evaluating Post-hoc Interpretability with Intrinsic Interpretability. CoRR (2023)
Philippe Weitz, Masi Valkonen, Leslie Solorzano, Circe Carr, Kimmo Kartasalo, Constance Boissin, Sonja Koivukoski, Aino Kuusela, Dusan Rasic, Yanbo Feng, Sandra Kristiane Sinius Pouplier, Abhinav Sharma, Kajsa Ledesma Eriksson, Stephanie Robertson, Christian Marzahl, Chandler D. Gatenbee, Alexander R. A. Anderson, Marek Wodzinski, Artur Jurgas, Niccolò Marini, Manfredo Atzori, Henning Müller, Daniel Budelmann, Nick Weiss, Stefan Heldmann, Johannes Lotz, Jelmer M. Wolterink, Bruno De Santi, Abhijeet Patil, Amit Sethi, Satoshi Kondo, Satoshi Kasai, Kousuke Hirasawa, Mahtab Farrokh, Neeraj Kumar, Russell Greiner, Leena Latonen, Anne-Vibeke Laenkholm, Johan Hartman, Pekka Ruusuvuori, Mattias Rantalainen
The ACROBAT 2022 Challenge: Automatic Registration Of Breast Cancer Tissue. CoRR (2023)
Nataliia Molchanova, Vatsal Raina, Andrey Malinin, Francesco La Rosa, Henning Müller, Mark J. F. Gales, Cristina Granziera, Mara Graziani, Meritxell Bach Cuadra
Novel Structural-Scale Uncertainty Measures and Error Retention Curves: Application to Multiple Sclerosis. ISBI (2023)
Marek Wodzinski, Henning Müller
Automatic Aorta Segmentation with Heavily Augmented, High-Resolution 3-D ResUNet: Contribution to the SEG.A Challenge. CoRR (2023)
Benjamin Kisliuk, Jan Christoph Krause, Hendrik Meemken, Juan Carlos Saborío-Morales, Henning Müller, Joachim Hertzberg
AI in Current and Future Agriculture: An Introductory Overview. Künstliche Intell. 37 (2) (2023)
Anjani Dhrangadhariya, Roger Hilfiker, Martin Sattelmayer, Katia Giacomino, Rahel Caliesch, Simone Elsig, Nona Naderi, Henning Müller
First Steps Towards a Risk of Bias Corpus of Randomized Controlled Trials. MIE (2023)
Nataliia Molchanova, Vatsal Raina, Andrey Malinin, Francesco La Rosa, Adrien Depeursinge, Mark J. F. Gales, Cristina Granziera, Henning Müller, Mara Graziani, Meritxell Bach Cuadra
Structural-Based Uncertainty in Deep Learning Across Anatomical Scales: Analysis in White Matter Lesion Segmentation. CoRR (2023)
Zhuxian Guo, Qitong Wang, Henning Müller, Themis Palpanas, Nicolas Loménie, Camille Kurtz
A Hierarchical Transformer Encoder to Improve Entire Neoplasm Segmentation on Whole Slide Image of Hepatocellular Carcinoma. CoRR (2023)
Mara Graziani, Laura O'Mahony, An-Phi Nguyen, Henning Müller, Vincent Andrearczyk
Uncovering Unique Concept Vectors through Latent Space Decomposition. Trans. Mach. Learn. Res. 2023 (2023)
Seyed Mohammad Alizadeh, Mohammad Sadegh Helfroush, Henning Müller
A novel Siamese deep hashing model for histopathology image retrieval. Expert Syst. Appl. 225 (2023)
Mara Graziani, Lidia Dutkiewicz, Davide Calvaresi, José Pereira Amorim, Katerina Yordanova, Mor Vered, Rahul Nair, Pedro Henriques Abreu, Tobias Blanke, Valeria Pulignano, John O. Prior, Lode Lauwaert, Wessel Reijers, Adrien Depeursinge, Vincent Andrearczyk, Henning Müller
A global taxonomy of interpretable AI: unifying the terminology for the technical and social sciences. Artif. Intell. Rev. 56 (4) (2023)
Mario Martínez-Zarzuela, Javier González-Alonso, Míriam Antón-Rodríguez, Francisco Javier Díaz Pernas, Henning Müller, Cristina Simon-Martinez
VIDIMU. Multimodal video and IMU kinematic dataset on daily life activities using affordable devices. CoRR (2023)
Bogdan Ionescu, Henning Müller, Ana-Maria Claudia Dragulinescu, Adrian Popescu, Ahmad Idrissi-Yaghir, Alba García Seco de Herrera, Alexandra Andrei, Alexandru Stan, Andrea M. Storås, Asma Ben Abacha, Christoph M. Friedrich, George Ioannidis, Griffin Adams, Henning Schäfer, Hugo Manguinhas, Ihar Filipovich, Ioan Coman, Jérôme Deshayes, Johanna Schöler, Johannes Rückert, Liviu-Daniel Stefan, Louise Bloch, Meliha Yetisgen, Michael A. Riegler, Mihai Dogariu, Mihai Gabriel Constantin, Neal Snider, Nikolaos Papachrysos, Pål Halvorsen, Raphael Brüngel, Serge Kozlovski, Steven Hicks, Thomas de Lange, Vajira Thambawita, Vassili Kovalev, Wen-wai Yim
ImageCLEF 2023 Highlight: Multimedia Retrieval in Medical, Social Media and Content Recommendation Applications. ECIR (3) (2023)
Mara Graziani, Laura O'Mahony, An-Phi Nguyen, Henning Müller, Vincent Andrearczyk
Uncovering Unique Concept Vectors through Latent Space Decomposition. CoRR (2023)
Mara Graziani, Niccolò Marini, Nicolas Deutschmann, Nikita Janakarajan, Henning Müller, María Rodríguez Martínez
Attention-Based Interpretable Regression of Gene Expression in Histology. iMIMIC@MICCAI (2022)
Niccolò Marini, Stefano Marchesin, Sebastian Otálora, Marek Wodzinski, Alessandro Caputo, Mart van Rijthoven, Witali Aswolinskiy, John-Melle Bokhorst, Damian Podareanu, Edyta Petters, Svetla Boytcheva, Genziana Buttafuoco, Simona Vatrano, Filippo Fraggetta, Jeroen van der Laak, Maristella Agosti, Francesco Ciompi, Gianmaria Silvello, Henning Müller, Manfredo Atzori
Unleashing the potential of digital pathology data by training computer-aided diagnosis models without human annotations. npj Digit. Medicine 5 (2022)
Alexis Joly, Hervé Goëau, Stefan Kahl, Lukás Picek, Titouan Lorieul, Elijah Cole, Benjamin Deneu, Maximilien Servajean, Andrew Durso, Isabelle Bolon, Hervé Glotin, Robert Planqué, Willem-Pier Vellinga, Holger Klinck, Tom Denton, Ivan Eggel, Pierre Bonnet, Henning Müller, Milan Sulc
LifeCLEF 2022 Teaser: An Evaluation of Machine-Learning Based Species Identification and Species Distribution Prediction. ECIR (2) (2022)
Mara Graziani, Niccolò Marini, Nicolas Deutschmann, Nikita Janakarajan, Henning Müller, María Rodríguez Martínez
Attention-based Interpretable Regression of Gene Expression in Histology. CoRR (2022)
Johannes Rückert, Asma Ben Abacha, Alba Garcia Seco de Herrera, Louise Bloch, Raphael Brüngel, Ahmad Idrissi-Yaghir, Henning Schäfer, Henning Müller, Christoph M. Friedrich
Overview of ImageCLEFmedical 2022 - Caption Prediction and Concept Detection. CLEF (Working Notes) (2022)
Marek Wodzinski, Artur Jurgas, Niccolò Marini, Manfredo Atzori, Henning Müller
Unsupervised Method for Intra-patient Registration of Brain Magnetic Resonance Images based on Objective Function Weighting by Inverse Consistency: Contribution to the BraTS-Reg Challenge. CoRR (2022)
Erik Faust, Alexander Schlüter, Henning Müller, Ralf Müller
Dirichlet and Neumann boundary conditions in a Lattice Boltzmann Method for Elastodynamics. CoRR (2022)
Anjani Dhrangadhariya, Henning Müller
DISTANT-CTO: A Zero Cost, Distantly Supervised Approach to Improve Low-Resource Entity Extraction Using Clinical Trials Literature. BioNLP@ACL (2022)
Bogdan Ionescu, Henning Müller, Renaud Péteri, Johannes Rückert, Asma Ben Abacha, Alba Garcia Seco de Herrera, Christoph M. Friedrich, Louise Bloch, Raphael Brüngel, Ahmad Idrissi-Yaghir, Henning Schäfer, Serge Kozlovski, Yashin Dicente Cid, Vassili Kovalev, Liviu-Daniel Stefan, Mihai Gabriel Constantin, Mihai Dogariu, Adrian Popescu, Jérôme Deshayes-Chossart, Hugo Schindler, Jon Chamberlain, Antonio Campello, Adrian F. Clark
Overview of the ImageCLEF 2022: Multimedia Retrieval in Medical, Social Media and Nature Applications. CLEF (2022)
Nataliia Molchanova, Vatsal Raina, Andrey Malinin, Francesco La Rosa, Henning Müller, Mark J. F. Gales, Cristina Granziera, Mara Graziani, Meritxell Bach Cuadra
Novel structural-scale uncertainty measures and error retention curves: application to multiple sclerosis. CoRR (2022)
Alba Garcia Seco de Herrera, Bogdan Ionescu, Henning Müller, Renaud Péteri, Asma Ben Abacha, Christoph M. Friedrich, Johannes Rückert, Louise Bloch, Raphael Brüngel, Ahmad Idrissi-Yaghir, Henning Schäfer, Serge Kozlovski, Yashin Dicente Cid, Vassili Kovalev, Jon Chamberlain, Adrian F. Clark, Antonio Campello, Hugo Schindler, Jérôme Deshayes, Adrian Popescu, Liviu-Daniel Stefan, Mihai Gabriel Constantin, Mihai Dogariu
ImageCLEF 2022: Multimedia Retrieval in Medical, Nature, Fusion, and Internet Applications. ECIR (2) (2022)
Erik Faust, Alexander Schlüter, Henning Müller, Ralf Müller
A Lattice Boltzmann Method for nonlinear solid mechanics in the reference configuration. CoRR (2022)
Serge Kozlovski, Yashin Dicente Cid, Vassili Kovalev, Henning Müller
Overview of ImageCLEFtuberculosis 2022 - CT-based Cavern Detection and Report. CLEF (Working Notes) (2022)
Marek Wodzinski, Artur Jurgas, Niccolò Marini, Manfredo Atzori, Henning Müller
Unsupervised Method for Intra-patient Registration of Brain Magnetic Resonance Images Based on Objective Function Weighting by Inverse Consistency: Contribution to the BraTS-Reg Challenge. BrainLes@MICCAI (2022)
Selene Tomassini, Agnese Sbrollini, Giacomo Covella, Paolo Sernani, Nicola Falcionelli, Henning Müller, Micaela Morettini, Laura Burattini, Aldo Franco Dragoni
Brain-on-Cloud for automatic diagnosis of Alzheimer's disease from 3D structural magnetic resonance whole-brain scans. Comput. Methods Programs Biomed. 227 (2022)
Maik Fruhner, Heiko Tapken, Henning Müller
Re-Identifikation markierter Schweine mit Computer Vision und Deep Learning. GIL Jahrestagung (2022)
Lena Maier-Hein, Annika Reinke, Evangelia Christodoulou, Ben Glocker, Patrick Godau, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A. Riegler, Manuel Wiesenfarth, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A. Emre Kavur, Tim Rädsch, Minu Dietlinde Tizabi, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Peter Bankhead, Arriel Benis, M. Jorge Cardoso, Veronika Cheplygina, Beth Cimini, Gary S. Collins, Keyvan Farahani, Bram van Ginneken, Daniel A. Hashimoto, Michael M. Hoffman, Merel Huisman, Pierre Jannin, Charles E. Kahn, Alexandros Karargyris, Alan Karthikesalingam, Hannes Kenngott, Annette Kopp-Schneider, Anna Kreshuk, Tahsin M. Kurç, Bennett A. Landman, Geert Litjens, Amin Madani, Klaus H. Maier-Hein, Anne L. Martel, Peter Mattson, Erik Meijering, Bjoern H. Menze, David Moher, Karel G. M. Moons, Henning Müller, Felix Nickel, Brennan Nichyporuk, Jens Petersen, Nasir Rajpoot, Nicola Rieke, Julio Saez-Rodriguez, Clarisa Sánchez Gutiérrez, Shravya Shetty, Maarten van Smeden, Carole H. Sudre, Ronald M. Summers, Abdel A. Taha, Sotirios A. Tsaftaris, Ben Van Calster, Gaël Varoquaux, Paul F. Jäger
Metrics reloaded: Pitfalls and recommendations for image analysis validation. CoRR (2022)
Henning Müller, Ali Touil, Alexander Schlüter, Ralf Müller
Dynamic Propagation of Mode III Cracks in a Lattice Boltzmann Method for Solids. CoRR (2022)
Santiago Toledo-Cortés, Diego H. Useche, Henning Müller, Fabio A. González
Grading diabetic retinopathy and prostate cancer diagnostic images with deep quantum ordinal regression. Comput. Biol. Medicine 145 (2022)
Niccolò Marini, Manfredo Atzori, Sebastian Otálora, Stéphane Marchand-Maillet, Henning Müller
H&E-adversarial network: a convolutional neural network to learn stain-invariant features through Hematoxylin & Eosin regression. CoRR (2022)
Bogdan Ionescu, Henning Müller, Renaud Péteri, Asma Ben Abacha, Mourad Sarrouti, Dina Demner-Fushman, Sadid A. Hasan, Serge Kozlovski, Vitali Liauchuk, Yashin Dicente Cid, Vassili Kovalev, Obioma Pelka, Alba García Seco de Herrera, Janadhip Jacutprakart, Christoph M. Friedrich, Raul Berari, Andrei Tauteanu, Dimitri Fichou, Paul Brie, Mihai Dogariu, Liviu-Daniel Stefan, Mihai Gabriel Constantin, Jon Chamberlain, Antonio Campello, Adrian Clark, Thomas Oliver, Hassan Moustahfid, Adrian Popescu, Jerome Deshayes-Chossart
Overview of the ImageCLEF 2021: Multimedia Retrieval in Medical, Nature, Internet and Social Media Applications. CLEF (2021)
Obioma Pelka, Asma Ben Abacha, Alba Garcia Seco de Herrera, Janadhip Jacutprakart, Christoph M. Friedrich, Henning Müller
Overview of the ImageCLEFmed 2021 Concept & Caption Prediction Task. CLEF (Working Notes) (2021)
Sebastian Otálora, Niccolò Marini, Henning Müller, Manfredo Atzori
Combining weakly and strongly supervised learning improves strong supervision in Gleason pattern classification. BMC Medical Imaging 21 (1) (2021)
Giulio Marano, Cristina Brambilla, Robert Mihai Mira, Alessandro Scano, Henning Müller, Manfredo Atzori
Questioning Domain Adaptation in Myoelectric Hand Prostheses Control: An Inter- and Intra-Subject Study. Sensors 21 (22) (2021)
K. Selçuk Candan, Guglielmo Faggioli, Nicola Ferro, Lorraine Goeuriot, Bogdan Ionescu, Alexis Joly, Birger Larsen, Maria Maistro, Henning Müller, Florina Piroi
Report on the 12th conference and labs of the evaluation forum (CLEF 2021): experimental IR meets multilinguality, multimodality, and interaction. SIGIR Forum 55 (2) (2021)
Serge Kozlovski, Vitali Liauchuk, Yashin Dicente Cid, Vassili Kovalev, Henning Müller
Overview of ImageCLEFtuberculosis 2021 - CT-based Tuberculosis Type Classification. CLEF (Working Notes) (2021)
Mara Graziani, Iam Palatnik de Sousa, Marley M. B. R. Vellasco, Eduardo Costa da Silva, Henning Müller, Vincent Andrearczyk
Sharpening Local Interpretable Model-Agnostic Explanations for Histopathology: Improved Understandability and Reliability. MICCAI (3) (2021)
Selene Tomassini, Nicola Falcionelli, Paolo Sernani, Henning Müller, Aldo Franco Dragoni
An End-to-End 3D ConvLSTM-based Framework for Early Diagnosis of Alzheimer's Disease from Full-Resolution Whole-Brain sMRI Scans. CBMS (2021)
Asma Ben Abacha, Mourad Sarrouti, Dina Demner-Fushman, Sadid A. Hasan, Henning Müller
Overview of the VQA-Med Task at ImageCLEF 2021: Visual Question Answering and Generation in the Medical Domain. CLEF (Working Notes) (2021)
Alexis Joly, Hervé Goëau, Elijah Cole, Stefan Kahl, Lukás Picek, Hervé Glotin, Benjamin Deneu, Maximilien Servajean, Titouan Lorieul, Willem-Pier Vellinga, Pierre Bonnet, Andrew Durso, Rafael Luis Ruiz De Castaneda, Ivan Eggel, Henning Müller
LifeCLEF 2021 Teaser: Biodiversity Identification and Prediction Challenges. ECIR (2) (2021)
Neda Azouji, Ashkan Sami, Mohammad Taheri, Henning Müller
A large margin piecewise linear classifier with fusion of deep features in the diagnosis of COVID-19. Comput. Biol. Medicine 139 (2021)
Niccolò Marini, Manfredo Atzori, Sebastian Otálora, Stéphane Marchand-Maillet, Henning Müller
H&E-adversarial network: a convolutional neural network to learn stain-invariant features through Hematoxylin & Eosin regression. ICCVW (2021)
Marek Wodzinski, Henning Müller
Invnet: A Deep Learning Approach To Invert Complex Deformation Fields. ISBI (2021)
Niccolò Marini, Sebastian Otálora, Francesco Ciompi, Gianmaria Silvello, Stefano Marchesin, Simona Vatrano, Genziana Buttafuoco, Manfredo Atzori, Henning Müller
Multi-Scale Task Multiple Instance Learning for the Classification of Digital Pathology Images with Global Annotations. COMPAY@MICCAI (2021)
Bogdan Ionescu, Maia Rohm, Bogdan Boteanu, Alexandru-Lucian Gînsca, Mihai Lupu, Henning Müller
Benchmarking Image Retrieval Diversification Techniques for Social Media. IEEE Trans. Multim. 23 (2021)
Annika Reinke, Matthias Eisenmann, Minu Dietlinde Tizabi, Carole H. Sudre, Tim Rädsch, Michela Antonelli, Tal Arbel, Spyridon Bakas, M. Jorge Cardoso, Veronika Cheplygina, Keyvan Farahani, Ben Glocker, Doreen Heckmann-Nötzel, Fabian Isensee, Pierre Jannin, Charles E. Kahn, Jens Kleesiek, Tahsin M. Kurç, Michal Kozubek, Bennett A. Landman, Geert Litjens, Klaus H. Maier-Hein, Bjoern H. Menze, Henning Müller, Jens Petersen, Mauricio Reyes, Nicola Rieke, Bram Stieltjes, Ronald M. Summers, Sotirios A. Tsaftaris, Bram van Ginneken, Annette Kopp-Schneider, Paul Jäger, Lena Maier-Hein
Common Limitations of Image Processing Metrics: A Picture Story. CoRR (2021)
Alexis Joly, Hervé Goëau, Stefan Kahl, Lukás Picek, Titouan Lorieul, Elijah Cole, Benjamin Deneu, Maximilien Servajean, Andrew Durso, Isabelle Bolon, Hervé Glotin, Robert Planqué, Rafael Luis Ruiz De Castaneda, Willem-Pier Vellinga, Holger Klinck, Tom Denton, Ivan Eggel, Pierre Bonnet, Henning Müller
Overview of LifeCLEF 2021: An Evaluation of Machine-Learning Based Species Identification and Species Distribution Prediction. CLEF (2021)
Niccolò Marini, Sebastian Otálora, Henning Müller, Manfredo Atzori
Semi-supervised training of deep convolutional neural networks with heterogeneous data and few local annotations: An experiment on prostate histopathology image classification. Medical Image Anal. 73 (2021)
Niccolò Marini, Sebastian Otálora, Damian Podareanu, Mart van Rijthoven, Jeroen van der Laak, Francesco Ciompi, Henning Müller, Manfredo Atzori
Multi_Scale_Tools: A Python Library to Exploit Multi-Scale Whole Slide Images. Frontiers Comput. Sci. 3 (2021)
Mara Graziani, Thomas Lompech, Henning Müller, Adrien Depeursinge, Vincent Andrearczyk
On the Scale Invariance in State of the Art CNNs Trained on ImageNet. Mach. Learn. Knowl. Extr. 3 (2) (2021)
Marek Wodzinski, Henning Müller
DeepHistReg: Unsupervised Deep Learning Registration Framework for Differently Stained Histology Samples. Comput. Methods Programs Biomed. 198 (2021)
Bogdan Ionescu, Henning Müller, Renaud Péteri, Asma Ben Abacha, Dina Demner-Fushman, Sadid A. Hasan, Mourad Sarrouti, Obioma Pelka, Christoph M. Friedrich, Alba Garcia Seco de Herrera, Janadhip Jacutprakart, Vassili Kovalev, Serge Kozlovski, Vitali Liauchuk, Yashin Dicente Cid, Jon Chamberlain, Adrian Clark, Antonio Campello, Hassan Moustahfid, Thomas Oliver, Abigail Schulz, Paul Brie, Raul Berari, Dimitri Fichou, Andrei Tauteanu, Mihai Dogariu, Liviu-Daniel Stefan, Mihai Gabriel Constantin, Jérôme Deshayes, Adrian Popescu
The 2021 ImageCLEF Benchmark: Multimedia Retrieval in Medical, Nature, Internet and Social Media Applications. ECIR (2) (2021)
Matteo Cognolato, Manfredo Atzori, Roger Gassert, Henning Müller
Improving Robotic Hand Prosthesis Control With Eye Tracking and Computer Vision: A Multimodal Approach Based on the Visuomotor Behavior of Grasping. Frontiers Artif. Intell. 4 (2021)
Anjani Dhrangadhariya, Gustavo Aguilar, Thamar Solorio, Roger Hilfiker, Henning Müller
End-to-End Fine-Grained Neural Entity Recognition of Patients, Interventions, Outcomes. CLEF (2021)
Alexis Joly, Hervé Goëau, Stefan Kahl, Christophe Botella, Rafael Luis Ruiz De Castaneda, Hervé Glotin, Elijah Cole, Julien Champ, Benjamin Deneu, Maximilien Servajean, Titouan Lorieul, Willem-Pier Vellinga, Fabian-Robert Stöter, Andrew Durso, Pierre Bonnet, Henning Müller
LifeCLEF 2020 Teaser: Biodiversity Identification and Prediction Challenges. ECIR (2) (2020)
Sebastian Otálora, Niccolò Marini, Henning Müller, Manfredo Atzori
Semi-weakly Supervised Learning for Prostate Cancer Image Classification with Teacher-Student Deep Convolutional Networks. iMIMIC/MIL3ID/LABELS@MICCAI (2020)
Oscar Alfonso Jiménez del Toro, Yashin Dicente Cid, Alexandra Platon, Anne-Lise Hachulla, Frédéric Lador, Pierre-Alexandre Poletti, Henning Müller
A lung graph model for the radiological assessment of chronic thromboembolic pulmonary hypertension in CT. Comput. Biol. Medicine 125 (2020)
Mara Graziani, Thomas Lompech, Henning Müller, Adrien Depeursinge, Vincent Andrearczyk
Interpretable CNN Pruning for Preserving Scale-Covariant Features in Medical Imaging. iMIMIC/MIL3ID/LABELS@MICCAI (2020)
Adrien Depeursinge, Vincent Andrearczyk, Philip Whybra, Joost van Griethuysen, Henning Müller, Roger Schaer, Martin Vallières, Alex Zwanenburg
Standardised convolutional filtering for radiomics. CoRR (2020)

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Henning Müller