Mauricio Reyes

ORCID

Publication Activity (10 Years)

Years Active: 2005-2024
Publications (10 Years): 85

Top Venues

Publications

Dwarikanath Mahapatra, Ruwan B. Tennakoon, Yasmeen George, Sudipta Roy, Behzad Bozorgtabar, Zongyuan Ge, Mauricio Reyes
ALFREDO: Active Learning with FeatuRe disEntangelement and DOmain adaptation for medical image classification. Medical Image Anal. 97 (2024)
Dwarikanath Mahapatra, Behzad Bozorgtabar, Zongyuan Ge, Mauricio Reyes, Jean-Philippe Thiran
Combining Graph Transformers Based Multi-Label Active Learning and Informative Data Augmentation for Chest Xray Classification. AAAI (2024)
Haozhe Luo, Aurélie Pahud de Mortanges, Oana Inel, Abraham Bernstein, Mauricio Reyes
DWARF: Disease-weighted network for attention map refinement. CoRR (2024)
Dwarikanath Mahapatra, Behzad Bozorgtabar, Zongyuan Ge, Mauricio Reyes
GANDALF: Graph-based transformer and Data Augmentation Active Learning Framework with interpretable features for multi-label chest Xray classification. Medical Image Anal. 93 (2024)
Ezequiel de la Rosa, Mauricio Reyes, Sook-Lei Liew, Alexandre Hutton, Roland Wiest, Johannes Kaesmacher, Uta Hanning, Arsany Hakim, Richard Zubal, Waldo Valenzuela, David Robben, Diana Maria Sima, Vincenzo Anania, Arne Brys, James A. Meakin, Anne Mickan, Gabriel Broocks, Christian Heitkamp, Shengbo Gao, Kongming Liang, Ziji Zhang, Md Mahfuzur Rahman Siddiquee, Andriy Myronenko, Pooya Ashtari, Sabine Van Huffel, Hyun-su Jeong, Chiho Yoon, Chulhong Kim, Jiayu Huo, Sébastien Ourselin, Rachel Sparks, Albert Clèrigues, Arnau Oliver, Xavier Lladó, Liam F. Chalcroft, Ioannis Pappas, Jeroen Bertels, Ewout Heylen, Juliette Moreau, Nima Hatami, Carole Frindel, Abdul Qayyum, Moona Mazher, Domenec Puig, Shao-Chieh Lin, Chun-Jung Juan, Tianxi Hu, Lyndon Boone, Maged Goubran, Yi-Jui Liu, Susanne Wegener, Florian Kofler, Ivan Ezhov, Suprosanna Shit, Moritz Roman Hernandez Petzsche, Bjoern H. Menze, Jan S. Kirschke, Benedikt Wiestler
A Robust Ensemble Algorithm for Ischemic Stroke Lesion Segmentation: Generalizability and Clinical Utility Beyond the ISLES Challenge. CoRR (2024)
Suhang You, Roland Wiest, Mauricio Reyes
SaRF: Saliency regularized feature learning improves MRI sequence classification. Comput. Methods Programs Biomed. 243 (2024)
Aurélie Pahud de Mortanges, Haozhe Luo, Shelley Zixin Shu, Amith Kamath, Yannick Suter, Mohamed Shelan, Alexander Poellinger, Mauricio Reyes
Orchestrating explainable artificial intelligence for multimodal and longitudinal data in medical imaging. npj Digit. Medicine 7 (1) (2024)
Elias Rüfenacht, Amith Kamath, Yannick Suter, Robert Poel, Ekin Ermis, Stefan Scheib, Mauricio Reyes
PyRaDiSe: A Python package for DICOM-RT-based auto-segmentation pipeline construction and DICOM-RT data conversion. Comput. Methods Programs Biomed. 231 (2023)
Dwarikanath Mahapatra, Alexander Poellinger, Mauricio Reyes
Graph Node Based Interpretability Guided Sample Selection for Active Learning. IEEE Trans. Medical Imaging 42 (3) (2023)
Dwarikanath Mahapatra, Antonio José Jimeno-Yepes, Shiba Kuanar, Sudipta Roy, Behzad Bozorgtabar, Mauricio Reyes, Zongyuan Ge
Class Specific Feature Disentanglement and Text Embeddings for Multi-label Generalized Zero Shot CXR Classification. MICCAI (2) (2023)
Elias Rüfenacht, Robert Poel, Amith Kamath, Ekin Ermis, Stefan Scheib, Michael K. Fix, Mauricio Reyes
Dose Guidance for Radiotherapy-Oriented Deep Learning Segmentation. MICCAI (9) (2023)
Annika Reinke, Minu Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A. Emre Kavur, Tim Rädsch, Carole H. Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B. Blaschko, Florian Büttner, M. Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A. Cimini, Gary S. Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Robert Haase, Daniel A. Hashimoto, Michael M. Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E. Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Hannes Kenngott, Jens Kleesiek, Florian Kofler, Thijs Kooi, Annette Kopp-Schneider, Michal Kozubek, Anna Kreshuk, Tahsin M. Kurç, Bennett A. Landman, Geert Litjens, Amin Madani, Klaus H. Maier-Hein, Anne L. Martel, Peter Mattson, Erik Meijering, Bjoern H. Menze, Karel G. M. Moons, Henning Müller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M. Rafelski, Nasir M. Rajpoot, Mauricio Reyes, Michael A. Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I. Sánchez, Shravya Shetty, Maarten van Smeden, Ronald M. Summers, Abdel A. Taha, Aleksei Tiulpin, Sotirios A. Tsaftaris, Ben Van Calster, Gaël Varoquaux, Manuel Wiesenfarth, Ziv R. Yaniv, Paul F. Jäger, Lena Maier-Hein
Understanding metric-related pitfalls in image analysis validation. CoRR (2023)
Suhang You, Devavrat Tomar, Behzad Bozorgtabar, Mauricio Reyes
SaGTTA: Saliency Guided Test Time Augmentation for Medical Image Segmentation Across Vendor Domain Shift. ISBI (2023)
Amith Kamath, Robert Poel, Jonas Willmann, Ekin Ermis, Nicolaus Andratschke, Mauricio Reyes
ASTRA: Atomic Surface Transformations for Radiotherapy Quality Assurance. EMBC (2023)
Amith Kamath, Robert Poel, Jonas Willmann, Nicolaus Andratschke, Mauricio Reyes
How Sensitive Are Deep Learning Based Radiotherapy Dose Prediction Models To Variability In Organs At Risk Segmentation? ISBI (2023)
Amith Kamath, Jonas Willmann, Nicolaus Andratschke, Mauricio Reyes
Do We Really Need that Skip-Connection? Understanding Its Interplay with Task Complexity. MICCAI (4) (2023)
Dwarikanath Mahapatra, Mauricio Reyes
Multi-label Attention Map Assisted Deep Feature Learning for Medical Image Classification. ECCV Workshops (7) (2022)
Dwarikanath Mahapatra, Zongyuan Ge, Mauricio Reyes
Self-Supervised Generalized Zero Shot Learning for Medical Image Classification Using Novel Interpretable Saliency Maps. IEEE Trans. Medical Imaging 41 (9) (2022)
Miao Kang, Xiaojun Hu, Weilin Huang, Matthew R. Scott, Mauricio Reyes
Dual-stream pyramid registration network. Medical Image Anal. 78 (2022)
Rudy Rizzo, Martyna Dziadosz, Sreenath P. Kyathanahally, Mauricio Reyes, Roland Kreis
Reliability of Quantification Estimates in MR Spectroscopy: CNNs vs Traditional Model Fitting. MICCAI (8) (2022)
Lena Maier-Hein, Annika Reinke, Evangelia Christodoulou, Ben Glocker, Patrick Godau, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A. Riegler, Manuel Wiesenfarth, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A. Emre Kavur, Tim Rädsch, Minu Dietlinde Tizabi, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Peter Bankhead, Arriel Benis, M. Jorge Cardoso, Veronika Cheplygina, Beth Cimini, Gary S. Collins, Keyvan Farahani, Bram van Ginneken, Daniel A. Hashimoto, Michael M. Hoffman, Merel Huisman, Pierre Jannin, Charles E. Kahn, Alexandros Karargyris, Alan Karthikesalingam, Hannes Kenngott, Annette Kopp-Schneider, Anna Kreshuk, Tahsin M. Kurç, Bennett A. Landman, Geert Litjens, Amin Madani, Klaus H. Maier-Hein, Anne L. Martel, Peter Mattson, Erik Meijering, Bjoern H. Menze, David Moher, Karel G. M. Moons, Henning Müller, Felix Nickel, Brennan Nichyporuk, Jens Petersen, Nasir Rajpoot, Nicola Rieke, Julio Saez-Rodriguez, Clarisa Sánchez Gutiérrez, Shravya Shetty, Maarten van Smeden, Carole H. Sudre, Ronald M. Summers, Abdel A. Taha, Sotirios A. Tsaftaris, Ben Van Calster, Gaël Varoquaux, Paul F. Jäger
Metrics reloaded: Pitfalls and recommendations for image analysis validation. CoRR (2022)
Dwarikanath Mahapatra, Behzad Bozorgtabar, Mauricio Reyes
Medical Image Super Resolution by Preserving Interpretable and Disentangled Features. ECCV Workshops (7) (2022)
Moritz Roman Hernandez Petzsche, Ezequiel de la Rosa, Uta Hanning, Roland Wiest, Waldo Enrique Valenzuela Pinilla, Mauricio Reyes, Maria Inês Meyer, Sook-Lei Liew, Florian Kofler, Ivan Ezhov, David Robben, Alexander Hutton, Tassilo Friedrich, Teresa Zarth, Johannes Bürkle, The Anh Baran, Bjoern H. Menze, Gabriel Broocks, Lukas Meyer, Claus Zimmer, Tobias Boeckh-Behrens, Maria Berndt, Benno Ikenberg, Benedikt Wiestler, Jan S. Kirschke
ISLES 2022: A multi-center magnetic resonance imaging stroke lesion segmentation dataset. CoRR (2022)
Dwarikanath Mahapatra, Alexander Poellinger, Mauricio Reyes
Interpretability-Guided Inductive Bias For Deep Learning Based Medical Image. Medical Image Anal. 81 (2022)
Daniel Abler, Vincent Andrearczyk, Valentin Oreiller, Javier Barranco Garcia, Diem Vuong, Stephanie Tanadini-Lang, Matthias Guckenberger, Mauricio Reyes, Adrien Depeursinge
Comparison of MR Preprocessing Strategies and Sequences for Radiomics-Based MGMT Prediction. BrainLes@MICCAI (2) (2021)
Adriano Pinto, Sérgio Pereira, Raphael Meier, Roland Wiest, Victor Alves, Mauricio Reyes, Carlos A. Silva
Combining unsupervised and supervised learning for predicting the final stroke lesion. CoRR (2021)
Bjoern H. Menze, Fabian Isensee, Roland Wiest, Benedikt Wiestler, Klaus H. Maier-Hein, Mauricio Reyes, Spyridon Bakas
Analyzing magnetic resonance imaging data from glioma patients using deep learning. Comput. Medical Imaging Graph. 88 (2021)
Adriano Pinto, Sérgio Pereira, Raphael Meier, Roland Wiest, Victor Alves, Mauricio Reyes, Carlos A. Silva
Combining unsupervised and supervised learning for predicting the final stroke lesion. Medical Image Anal. 69 (2021)
Jean Pablo Vieira de Mello, Thiago M. Paixão, Rodrigo Ferreira Berriel, Mauricio Reyes, Claudine Badue, Alberto F. De Souza, Thiago Oliveira-Santos
Deep Learning-based Type Identification of Volumetric MRI Sequences. CoRR (2021)
Annika Reinke, Matthias Eisenmann, Minu Dietlinde Tizabi, Carole H. Sudre, Tim Rädsch, Michela Antonelli, Tal Arbel, Spyridon Bakas, M. Jorge Cardoso, Veronika Cheplygina, Keyvan Farahani, Ben Glocker, Doreen Heckmann-Nötzel, Fabian Isensee, Pierre Jannin, Charles E. Kahn, Jens Kleesiek, Tahsin M. Kurç, Michal Kozubek, Bennett A. Landman, Geert Litjens, Klaus H. Maier-Hein, Bjoern H. Menze, Henning Müller, Jens Petersen, Mauricio Reyes, Nicola Rieke, Bram Stieltjes, Ronald M. Summers, Sotirios A. Tsaftaris, Bram van Ginneken, Annette Kopp-Schneider, Paul Jäger, Lena Maier-Hein
Common Limitations of Image Processing Metrics: A Picture Story. CoRR (2021)
Adriano Pinto, Joana Amorim, Arsany Hakim, Victor Alves, Mauricio Reyes, Carlos A. Silva
Prediction of Stroke Lesion at 90-Day Follow-Up by Fusing Raw DSC-MRI With Parametric Maps Using Deep Learning. IEEE Access 9 (2021)
Dwarikanath Mahapatra, Alexander Pollinger, Ling Shao, Mauricio Reyes
Interpretability-Driven Sample Selection Using Self Supervised Learning for Disease Classification and Segmentation. IEEE Trans. Medical Imaging 40 (10) (2021)
Robert Poel, Elias Rüfenacht, Evelyn Hermann, Stefan Scheib, Peter Manser, Daniel M. Aebersold, Mauricio Reyes
The predictive value of segmentation metrics on dosimetry in organs at risk of the brain. Medical Image Anal. 73 (2021)
Alain Jungo, Olivier Scheidegger, Mauricio Reyes, Fabian Balsiger
pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis. Comput. Methods Programs Biomed. 198 (2021)
Alain Jungo, Olivier Scheidegger, Mauricio Reyes, Fabian Balsiger
pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis. CoRR (2020)
Fabian Balsiger, Alain Jungo, Olivier Scheidegger, Pierre G. Carlier, Mauricio Reyes, Benjamin Marty
Spatially regularized parametric map reconstruction for fast magnetic resonance fingerprinting. Medical Image Anal. 64 (2020)
Fabian Balsiger, Alain Jungo, Olivier Scheidegger, Benjamin Marty, Mauricio Reyes
Learning Bloch Simulations for MR Fingerprinting by Invertible Neural Networks. MLMIR@MICCAI (2020)
Fabian Balsiger, Alain Jungo, Olivier Scheidegger, Benjamin Marty, Mauricio Reyes
Learning Bloch Simulations for MR Fingerprinting by Invertible Neural Networks. CoRR (2020)
Wilson Silva, Alexander Pollinger, Jaime S. Cardoso, Mauricio Reyes
Interpretability-Guided Content-Based Medical Image Retrieval. MICCAI (1) (2020)
José Pereira Amorim, Pedro H. Abreu, Mauricio Reyes, João A. M. Santos
Interpretability vs. Complexity: The Friction in Deep Neural Networks. IJCNN (2020)
Xiaojun Hu, Weijian Luo, Jiliang Hu, Sheng Guo, Weilin Huang, Matthew R. Scott, Roland Wiest, Michael Dahlweid, Mauricio Reyes
Brain SegNet: 3D local refinement network for brain lesion segmentation. BMC Medical Imaging 20 (1) (2020)
Yannick Suter, Urspeter Knecht, Roland Wiest, Ekkehard Hewer, Philippe Schucht, Mauricio Reyes
Towards MRI Progression Features for Glioblastoma Patients: From Automated Volumetry and Classical Radiomics to Deep Feature Learning. MLCN/RNO-AI@MICCAI (2020)
Yannick Suter, Urspeter Knecht, Roland Wiest, Mauricio Reyes
Overall Survival Prediction for Glioblastoma on Pre-treatment MRI Using Robust Radiomics and Priors. BrainLes@MICCAI (1) (2020)
Jean Pablo Vieira de Mello, Thiago M. Paixão, Rodrigo Ferreira Berriel, Mauricio Reyes, Claudine Badue, Alberto F. De Souza, Thiago Oliveira-Santos
Deep Learning-based Type Identification of Volumetric MRI Sequences. ICPR (2020)
Xiaojun Hu, Miao Kang, Weilin Huang, Matthew R. Scott, Roland Wiest, Mauricio Reyes
Dual-Stream Pyramid Registration Network. MICCAI (2) (2019)
Fabian Balsiger, Yannick Soom, Olivier Scheidegger, Mauricio Reyes
Learning Shape Representation on Sparse Point Clouds for Volumetric Image Segmentation. CoRR (2019)
Alain Jungo, Mauricio Reyes
Assessing Reliability and Challenges of Uncertainty Estimations for Medical Image Segmentation. CoRR (2019)
Fabian Balsiger, Yannick Soom, Olivier Scheidegger, Mauricio Reyes
Learning Shape Representation on Sparse Point Clouds for Volumetric Image Segmentation. MICCAI (2) (2019)
Behzad Bozorgtabar, Dwarikanath Mahapatra, Hendrik von Teng, Alexander Pollinger, Lukas Ebner, Jean-Philippe Thiran, Mauricio Reyes
Informative sample generation using class aware generative adversarial networks for classification of chest Xrays. Comput. Vis. Image Underst. 184 (2019)
Richard McKinley, Rik Wepfer, Fabian Aschwanden, Lorenz Grunder, Raphaela Muri, Christian Rummel, Rajeev Verma, Christian Weisstanner, Mauricio Reyes, Anke Salmen, Andrew Chan, Franca Wagner, Roland Wiest
Simultaneous lesion and neuroanatomy segmentation in Multiple Sclerosis using deep neural networks. CoRR (2019)
Richard McKinley, Lorenz Grunder, Rik Wepfer, Fabian Aschwanden, Tim Fischer, Christoph Friedli, Raphaela Muri, Christian Rummel, Rajeev Verma, Christian Weisstanner, Mauricio Reyes, Anke Salmen, Andrew Chan, Roland Wiest, Franca Wagner
Automatic detection of lesion load change in Multiple Sclerosis using convolutional neural networks with segmentation confidence. CoRR (2019)
Fabian Balsiger, Olivier Scheidegger, Pierre G. Carlier, Benjamin Marty, Mauricio Reyes
On the Spatial and Temporal Influence for the Reconstruction of Magnetic Resonance Fingerprinting. MIDL (2019)
Vimal Chandran, Ghislain Maquer, Thomas Gerig, Philippe Zysset, Mauricio Reyes
Supervised learning for bone shape and cortical thickness estimation from CT images for finite element analysis. Medical Image Anal. 52 (2019)
Behzad Bozorgtabar, Dwarikanath Mahapatra, Hendrik von Teng, Alexander Pollinger, Lukas Ebner, Jean-Philippe Thiran, Mauricio Reyes
Informative sample generation using class aware generative adversarial networks for classification of chest Xrays. CoRR (2019)
Richard McKinley, Michael Rebsamen, Raphael Meier, Mauricio Reyes, Christian Rummel, Roland Wiest
Few-shot brain segmentation from weakly labeled data with deep heteroscedastic multi-task networks. CoRR (2019)
Michael Rebsamen, Christian Rummel, Ines Mürner-Lavanchy, Mauricio Reyes, Roland Wiest, Richard McKinley
Surface-Based Brain Morphometry for the Prediction of Fluid Intelligence in the Neurocognitive Prediction Challenge 2019. ABCD-NP@MICCAI (2019)
Xiaojun Hu, Miao Kang, Weilin Huang, Matthew R. Scott, Roland Wiest, Mauricio Reyes
Dual-Stream Pyramid Registration Network. CoRR (2019)
Fabian Balsiger, Alain Jungo, Olivier Scheidegger, Pierre G. Carlier, Mauricio Reyes, Benjamin Marty
Spatially Regularized Parametric Map Reconstruction for Fast Magnetic Resonance Fingerprinting. CoRR (2019)
Alain Jungo, Mauricio Reyes
Assessing Reliability and Challenges of Uncertainty Estimations for Medical Image Segmentation. MICCAI (2) (2019)
Dwarikanath Mahapatra, Behzad Bozorgtabar, Jean-Philippe Thiran, Mauricio Reyes
Efficient Active Learning for Image Classification and Segmentation Using a Sample Selection and Conditional Generative Adversarial Network. MICCAI (2) (2018)
Hans Martin Kjer, Jens Fagertun, Wilhelm Wimmer, Nicolas Gerber, Sergio Vera, Livia Barazzetti, Nerea Mangado Lopez, Mario Ceresa, Gemma Piella, Thomas Stark, Martin Stauber, Mauricio Reyes, Stefan Weber, Marco Caversaccio, Miguel Ángel González Ballester, Rasmus R. Paulsen
Patient-specific estimation of detailed cochlear shape from clinical CT images. Int. J. Comput. Assist. Radiol. Surg. 13 (3) (2018)
Ping Lu, Livia Barazzetti, Vimal Chandran, Kate A. Gavaghan, Stefan Weber, Nicolas Gerber, Mauricio Reyes
Highly Accurate Facial Nerve Segmentation Refinement From CBCT/CT Imaging Using a Super-Resolution Classification Approach. IEEE Trans. Biomed. Eng. 65 (1) (2018)
Yannick Suter, Christian Rummel, Roland Wiest, Mauricio Reyes
Fast and uncertainty-aware cerebral cortex morphometry estimation using random forest regression. ISBI (2018)
Alain Jungo, Raphael Meier, Ekin Ermis, Marcela Blatti-Moreno, Evelyn Herrmann, Roland Wiest, Mauricio Reyes
On the Effect of Inter-observer Variability for a Reliable Estimation of Uncertainty of Medical Image Segmentation. MICCAI (1) (2018)
Alain Jungo, Raphael Meier, Ekin Ermis, Marcela Blatti-Moreno, Evelyn Herrmann, Roland Wiest, Mauricio Reyes
On the Effect of Inter-observer Variability for a Reliable Estimation of Uncertainty of Medical Image Segmentation. CoRR (2018)
Sérgio Pereira, Raphael Meier, Victor Alves, Mauricio Reyes, Carlos A. Silva
Automatic brain tumor grading from MRI data using convolutional neural networks and quality assessment. CoRR (2018)
Alain Jungo, Raphael Meier, Ekin Ermis, Evelyn Herrmann, Mauricio Reyes
Uncertainty-driven Sanity Check: Application to Postoperative Brain Tumor Cavity Segmentation. CoRR (2018)
Sérgio Pereira, Raphael Meier, Victor Alves, Mauricio Reyes, Carlos A. Silva
Automatic Brain Tumor Grading from MRI Data Using Convolutional Neural Networks and Quality Assessment. MLCN/DLF/iMIMIC@MICCAI (2018)
Fabian Balsiger, Amaresha Shridhar Konar, Shivaprasad Chikop, Vimal Chandran, Olivier Scheidegger, Sairam Geethanath, Mauricio Reyes
Magnetic Resonance Fingerprinting Reconstruction via Spatiotemporal Convolutional Neural Networks. MLMIR@MICCAI (2018)
Adriano Pinto, Sérgio Pereira, Raphael Meier, Victor Alves, Roland Wiest, Carlos A. Silva, Mauricio Reyes
Enhancing clinical MRI Perfusion maps with data-driven maps of complementary nature for lesion outcome prediction. CoRR (2018)
Adriano Pinto, Sérgio Pereira, Raphael Meier, Victor Alves, Roland Wiest, Carlos A. Silva, Mauricio Reyes
Enhancing Clinical MRI Perfusion Maps with Data-Driven Maps of Complementary Nature for Lesion Outcome Prediction. MICCAI (3) (2018)
Spyridon Bakas, Mauricio Reyes, András Jakab, Stefan Bauer, Markus Rempfler, Alessandro Crimi, Russell Takeshi Shinohara, Christoph Berger, Sung Min Ha, Martin Rozycki, Marcel Prastawa, Esther Alberts, Jana Lipková, John B. Freymann, Justin S. Kirby, Michel Bilello, Hassan M. Fathallah-Shaykh, Roland Wiest, Jan Kirschke, Benedikt Wiestler, Rivka R. Colen, Aikaterini Kotrotsou, Pamela LaMontagne, Daniel S. Marcus, Mikhail Milchenko, Arash Nazeri, Marc-André Weber, Abhishek Mahajan, Ujjwal Baid, Dongjin Kwon, Manu Agarwal, Mahbubul Alam, Alberto Albiol, Antonio Albiol, Alex Varghese, Tran Anh Tuan, Tal Arbel, Aaron Avery, Pranjal B., Subhashis Banerjee, Thomas Batchelder, Kayhan N. Batmanghelich, Enzo Battistella, Martin Bendszus, Eze Benson, José Bernal, George Biros, Mariano Cabezas, Siddhartha Chandra, Yi-Ju Chang, et al.
Identifying the Best Machine Learning Algorithms for Brain Tumor Segmentation, Progression Assessment, and Overall Survival Prediction in the BRATS Challenge. CoRR (2018)
Fabian Balsiger, Amaresha Shridhar Konar, Shivaprasad Chikop, Vimal Chandran, Olivier Scheidegger, Sairam Geethanath, Mauricio Reyes
Magnetic Resonance Fingerprinting Reconstruction via Spatiotemporal Convolutional Neural Networks. CoRR (2018)
Yannick Suter, Alain Jungo, Michael Rebsamen, Urspeter Knecht, Evelyn Herrmann, Roland Wiest, Mauricio Reyes
Deep Learning Versus Classical Regression for Brain Tumor Patient Survival Prediction. BrainLes@MICCAI (2) (2018)
Yannick Suter, Alain Jungo, Michael Rebsamen, Urspeter Knecht, Evelyn Herrmann, Roland Wiest, Mauricio Reyes
Deep Learning versus Classical Regression for Brain Tumor Patient Survival Prediction. CoRR (2018)
Sérgio Pereira, Raphael Meier, Richard McKinley, Roland Wiest, Victor Alves, Carlos A. Silva, Mauricio Reyes
Enhancing interpretability of automatically extracted machine learning features: application to a RBM-Random Forest system on brain lesion segmentation. Medical Image Anal. 44 (2018)
Dwarikanath Mahapatra, Behzad Bozorgtabar, Jean-Philippe Thiran, Mauricio Reyes
Efficient Active Learning for Image Classification and Segmentation using a Sample Selection and Conditional Generative Adversarial Network. CoRR (2018)
Alain Jungo, Richard McKinley, Raphael Meier, Urspeter Knecht, Luis Vera, Julián Pérez-Beteta, David Molina-García, Víctor M. Pérez-García, Roland Wiest, Mauricio Reyes
Towards Uncertainty-Assisted Brain Tumor Segmentation and Survival Prediction. BrainLes@MICCAI (2017)
Richard McKinley, Alain Jungo, Roland Wiest, Mauricio Reyes
Pooling-Free Fully Convolutional Networks with Dense Skip Connections for Semantic Segmentation, with Application to Brain Tumor Segmentation. BrainLes@MICCAI (2017)
Raphael Meier, Urspeter Knecht, Alain Jungo, Roland Wiest, Mauricio Reyes
Perturb-and-MPM: Quantifying Segmentation Uncertainty in Dense Multi-Label CRFs. CoRR (2017)
Kamal Shahim, Mauricio Reyes, Ruben Simon, Philipp Jürgens, Christoph Blecher
Advanced Design System for Infantile Cranium Shape Model Growth Prediction. MIAR (2016)
Raphael Meier, Urspeter Knecht, Roland Wiest, Mauricio Reyes
CRF-Based Brain Tumor Segmentation: Alleviating the Shrinking Bias. BrainLes@MICCAI (2016)
Ping Lu, Livia Barazzetti, Vimal Chandran, Kate A. Gavaghan, Stefan Weber, Nicolas Gerber, Mauricio Reyes
Super-Resolution Classification Improves Facial Nerve Segmentation from CBCT Imaging. CURAC (2016)
Richard McKinley, Rik Wepfer, Tom Gundersen, Franca Wagner, Andrew Chan, Roland Wiest, Mauricio Reyes
Nabla-net: A Deep Dag-Like Convolutional Architecture for Biomedical Image Segmentation. BrainLes@MICCAI (2016)
Carlos Correa Shokiche, Philipp Baumann, Ruslan Hlushchuk, Valentin Djonov, Mauricio Reyes
High-Throughput Glomeruli Analysis of μ CT Kidney Images Using Tree Priors and Scalable Sparse Computation. MICCAI (2) (2016)
Bjoern H. Menze, András Jakab, Stefan Bauer, Jayashree Kalpathy-Cramer, Keyvan Farahani, Justin S. Kirby, Yuliya Burren, Nicole Porz, Johannes Slotboom, Roland Wiest, Levente Lanczi, Elizabeth R. Gerstner, Marc-André Weber, Tal Arbel, Brian B. Avants, Nicholas Ayache, Patricia Buendia, D. Louis Collins, Nicolas Cordier, Jason J. Corso, Antonio Criminisi, Tilak Das, Herve Delingette, Çagatay Demiralp, Christopher R. Durst, Michel Dojat, Senan Doyle, Joana Festa, Florence Forbes, Ezequiel Geremia, Ben Glocker, Polina Golland, Xiaotao Guo, Andac Hamamci, Khan M. Iftekharuddin, Raj Jena, Nigel M. John, Ender Konukoglu, Danial Lashkari, José Antonio Mariz, Raphael Meier, Sérgio Pereira, Doina Precup, Stephen J. Price, Tammy Riklin Raviv, Syed M. S. Reza, Michael T. Ryan, Duygu Sarikaya, Lawrence H. Schwartz, Hoo-Chang Shin, Jamie Shotton, Carlos A. Silva, Nuno Sousa, Nagesh K. Subbanna, Gábor Székely, Thomas J. Taylor, Owen M. Thomas, Nicholas J. Tustison, Gözde B. Ünal, Flor Vasseur, Max Wintermark, Dong Hye Ye, Liang Zhao, Binsheng Zhao, Darko Zikic, Marcel Prastawa, Mauricio Reyes, Koen Van Leemput
The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS). IEEE Trans. Medical Imaging 34 (10) (2015)
Raphael Meier, Venetia Karamitsou, Simon Habegger, Roland Wiest, Mauricio Reyes
Parameter Learning for CRF-Based Tissue Segmentation of Brain Tumors. Brainles@MICCAI (2015)
Juan J. Cerrolaza, Mauricio Reyes, Ronald M. Summers, Miguel Ángel González Ballester, Marius George Linguraru
Automatic multi-resolution shape modeling of multi-organ structures. Medical Image Anal. 25 (1) (2015)
Richard McKinley, Levin Häni, Roland Wiest, Mauricio Reyes
Segmenting the Ischemic Penumbra: A Decision Forest Approach with Automatic Threshold Finding. Brainles@MICCAI (2015)
Ping Lu, Livia Barazzetti, Vimal Chandran, Kate A. Gavaghan, Stefan Weber, Nicolas Gerber, Mauricio Reyes
Facial nerve image enhancement from CBCT using supervised learning technique. EMBC (2015)
Vimal Chandran, Philippe Zysset, Mauricio Reyes
Prediction of Trabecular Bone Anisotropy from Quantitative Computed Tomography Using Supervised Learning and a Novel Morphometric Feature Descriptor. MICCAI (1) (2015)
Waldo Valenzuela, Stephen J. Ferguson, Dominika Ignasiak, Gaelle Diserens, Peter Vermathen, Chris Boesch, Mauricio Reyes
Correction tool for Active Shape Model based lumbar muscle segmentation. EMBC (2015)
Christian Baumberger, Mauricio Reyes, Mihai Constantinescu, Radu Olariu, Edilson de Aguiar, Thiago Oliveira-Santos
3D Face Reconstruction from Video Using 3D Morphable Model and Silhouette. SIBGRAPI (2014)
Thomas Gerig, Kamal Shahim, Mauricio Reyes, Thomas Vetter, Marcel Lüthi
Spatially Varying Registration Using Gaussian Processes. MICCAI (2) (2014)
Sergio Vera, Frederic Pérez, Clara Balust, Ramon Trueba, Jordi Rubió, Raul Calvo, Xavier Mazaira, Anandhan Dhanasingh, Livia Barazzetti, Mauricio Reyes, Mario Ceresa, Jens Fagertun, Hans Martin Kjer, Rasmus R. Paulsen, Miguel Ángel González Ballester
Patient Specific Simulation for Planning of Cochlear Implantation Surgery. CLIP@MICCAI (2014)
Raphael Meier, Stefan Bauer, Johannes Slotboom, Roland Wiest, Mauricio Reyes
Patient-Specific Semi-supervised Learning for Postoperative Brain Tumor Segmentation. MICCAI (1) (2014)
Stefan Bauer, Pascal P. Gratz, Jan Gralla, Mauricio Reyes, Roland Wiest
Towards automatic MRI volumetry for treatment selection in acute ischemic stroke patients. EMBC (2014)
Stefan Bauer, Nicole Porz, Raphael Meier, Alessia Pica, Johannes Slotboom, Roland Wiest, Mauricio Reyes
Interactive segmentation of MR images from brain tumor patients. ISBI (2014)
Juan J. Cerrolaza, Arantxa Villanueva, Mauricio Reyes, Rafael Cabeza, Miguel Ángel González Ballester, Marius George Linguraru
Generalized Multiresolution Hierarchical Shape Models via Automatic Landmark Clusterization. MICCAI (3) (2014)
Kamal Shahim, Philipp Jürgens, Philippe C. Cattin, Lutz-Peter Nolte, Mauricio Reyes
Prediction of Cranio-Maxillofacial Surgical Planning Using an Inverse Soft Tissue Modelling Approach. MICCAI (1) (2013)

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Mauricio Reyes