Paul F. Jäger

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 31

Top Topics

Probabilistic Modeling

Medical Image Segmentation

Top Venues

Bildverarbeitung für die Medizin

Publications

Stefan Denner, David Zimmerer, Dimitrios Bounias, Markus Bujotzek, Shuhan Xiao, Lisa Kausch, Philipp Schader, Tobias Penzkofer, Paul F. Jäger, Klaus H. Maier-Hein
Leveraging Foundation Models for Content-Based Medical Image Retrieval in Radiology. CoRR (2024)
Karol Gotkowski, Carsten T. Lüth, Paul F. Jäger, Sebastian Ziegler, Lars Krämer, Stefan Denner, Shuhan Xiao, Nico Disch, Klaus H. Maier-Hein, Fabian Isensee
Embarrassingly Simple Scribble Supervision for 3D Medical Segmentation. CoRR (2024)
Balint Kovacs, Nils Netzer, Michael Baumgartner, Carolin Eith, Dimitrios Bounias, Clara Meinzer, Paul F. Jäger, Kevin S. Zhang, Ralf Floca, Adrian Schrader, Fabian Isensee, Regula Gnirs, Magdalena Görtz, Viktoria Schütz, Albrecht Stenzinger, Markus Hohenfellner, Heinz-Peter Schlemmer, Ivo Wolf, David Bonekamp, Klaus H. Maier-Hein
Abstract: Anatomy-informed Data Augmentation for Enhanced Prostate Cancer Detection. Bildverarbeitung für die Medizin (2024)
Maximilian Zenk, David Zimmerer, Fabian Isensee, Jeremias Traub, Tobias Norajitra, Paul F. Jäger, Klaus H. Maier-Hein
Comparative Benchmarking of Failure Detection Methods in Medical Image Segmentation: Unveiling the Role of Confidence Aggregation. CoRR (2024)
Silvia Dias Almeida, Carsten T. Lüth, Tobias Norajitra, Tassilo Wald, Marco Nolden, Paul F. Jäger, Claus Peter Heussel, Jürgen Biederer, Oliver Weinheimer, Klaus H. Maier-Hein
Abstract: Reformulating COPD Classification on Chest CT Scans as Anomaly Detection using Contrastive Representations - cOOpD. Bildverarbeitung für die Medizin (2024)
Balint Kovacs, Nils Netzer, Michael Baumgartner, Carolin Eith, Dimitrios Bounias, Clara Meinzer, Paul F. Jäger, Kevin S. Zhang, Ralf Floca, Adrian Schrader, Fabian Isensee, Regula Gnirs, Magdalena Goertz, Viktoria Schuetz, Albrecht Stenzinger, Markus Hohenfellner, Heinz-Peter Schlemmer, Ivo Wolf, David Bonekamp, Klaus H. Maier-Hein
Anatomy-Informed Data Augmentation for Enhanced Prostate Cancer Detection. MICCAI (7) (2023)
Till J. Bungert, Levin Kobelke, Paul F. Jäger
Understanding Silent Failures in Medical Image Classification. MICCAI (3) (2023)
Silvia Dias Almeida, Carsten T. Lüth, Tobias Norajitra, Tassilo Wald, Marco Nolden, Paul F. Jäger, Claus Peter Heussel, Jürgen Biederer, Oliver Weinheimer, Klaus H. Maier-Hein
cOOpD: Reformulating COPD Classification on Chest CT Scans as Anomaly Detection Using Contrastive Representations. MICCAI (5) (2023)
Annika Reinke, Minu Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A. Emre Kavur, Tim Rädsch, Carole H. Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B. Blaschko, Florian Büttner, M. Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A. Cimini, Gary S. Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Robert Haase, Daniel A. Hashimoto, Michael M. Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E. Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Hannes Kenngott, Jens Kleesiek, Florian Kofler, Thijs Kooi, Annette Kopp-Schneider, Michal Kozubek, Anna Kreshuk, Tahsin M. Kurç, Bennett A. Landman, Geert Litjens, Amin Madani, Klaus H. Maier-Hein, Anne L. Martel, Peter Mattson, Erik Meijering, Bjoern H. Menze, Karel G. M. Moons, Henning Müller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M. Rafelski, Nasir M. Rajpoot, Mauricio Reyes, Michael A. Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I. Sánchez, Shravya Shetty, Maarten van Smeden, Ronald M. Summers, Abdel A. Taha, Aleksei Tiulpin, Sotirios A. Tsaftaris, Ben Van Calster, Gaël Varoquaux, Manuel Wiesenfarth, Ziv R. Yaniv, Paul F. Jäger, Lena Maier-Hein
Understanding metric-related pitfalls in image analysis validation. CoRR (2023)
Patrick Godau, Piotr Kalinowski, Evangelia Christodoulou, Annika Reinke, Minu Tizabi, Luciana Ferrer, Paul F. Jäger, Lena Maier-Hein
Deployment of Image Analysis Algorithms Under Prevalence Shifts. MICCAI (3) (2023)
Matthias Eisenmann, Annika Reinke, Vivienn Weru, Minu Dietlinde Tizabi, Fabian Isensee, Tim J. Adler, Sharib Ali, Vincent Andrearczyk, Marc Aubreville, Ujjwal Baid, Spyridon Bakas, Niranjan Balu, Sophia Bano, Jorge Bernal, Sebastian Bodenstedt, Alessandro Casella, Veronika Cheplygina, Marie Daum, Marleen de Bruijne, Adrien Depeursinge, Reuben Dorent, Jan Egger, David G. Ellis, Sandy Engelhardt, Melanie Ganz, Noha M. Ghatwary, Gabriel Girard, Patrick Godau, Anubha Gupta, Lasse Hansen, Kanako Harada, Mattias P. Heinrich, Nicholas Heller, Alessa Hering, Arnaud Huaulmé, Pierre Jannin, A. Emre Kavur, Oldrich Kodym, Michal Kozubek, Jianning Li, Hongwei Bran Li, Jun Ma, Carlos Martín-Isla, Bjoern H. Menze, J. Alison Noble, Valentin Oreiller, Nicolas Padoy, Sarthak Pati, Kelly Payette, Tim Rädsch, Jonathan Rafael-Patino, Vivek Singh Bawa, Stefanie Speidel, Carole H. Sudre, Kimberlin M. H. van Wijnen, M. Wagner, D. Wei, Amine Yamlahi, Moi Hoon Yap, C. Yuan, Maximilian Zenk, A. Zia, David Zimmerer, Dogu Baran Aydogan, B. Bhattarai, Louise Bloch, Raphael Brüngel, J. Cho, C. Choi, Q. Dou, Ivan Ezhov, Christoph M. Friedrich, C. Fuller, Rebati Raman Gaire, Adrian Galdran, Álvaro García-Faura, Maria Grammatikopoulou, S. Hong, Mostafa Jahanifar, I. Jang, Abdolrahim Kadkhodamohammadi, I. Kang, Florian Kofler, S. Kondo, Hugo Jaco Kuijf, M. Li, M. Luu, Tomaz Martincic, P. Morais, M. A. Naser, B. Oliveira, D. Owen, S. Pang, J. Park, S. Park, S. Plotka, Élodie Puybareau, Nasir M. Rajpoot, K. Ryu, N. Saeed, Adam Shephard, P. Shi, Dejan Stepec, Ronast Subedi, Guillaume Tochon, Helena R. Torres, Hélène Urien, João L. Vilaça, Kareem A. Wahid, H. Wang, J. Wang, L. Wang, X. Wang, Benedikt Wiestler, Marek Wodzinski, F. Xia, J. Xie, Z. Xiong, S. Yang, Y. Yang, Z. Zhao, Klaus H. Maier-Hein, Paul F. Jäger, Annette Kopp-Schneider, Lena Maier-Hein
Why is the Winner the Best? CVPR (2023)
Saikat Roy, Gregor Köhler, Constantin Ulrich, Michael Baumgartner, Jens Petersen, Fabian Isensee, Paul F. Jäger, Klaus H. Maier-Hein
MedNeXt: Transformer-Driven Scaling of ConvNets for Medical Image Segmentation. MICCAI (4) (2023)
Zdravko Marinov, Paul F. Jäger, Jan Egger, Jens Kleesiek, Rainer Stiefelhagen
Deep Interactive Segmentation of Medical Images: A Systematic Review and Taxonomy. CoRR (2023)
Maximilian Zenk, David Zimmerer, Fabian Isensee, Paul F. Jäger, Jakob Wasserthal, Klaus H. Maier-Hein
Realistic Evaluation of FixMatch on Imbalanced Medical Image Classification Tasks. Bildverarbeitung für die Medizin (2022)
Michael Baumgartner, Paul F. Jäger, Fabian Isensee, Klaus H. Maier-Hein
Abstract: nnDetection - A Self-configuring Method for Medical Object Detection. Bildverarbeitung für die Medizin (2022)
Lukas Klein, Mennatallah El-Assady, Paul F. Jäger
From Correlation to Causation: Formalizing Interpretable Machine Learning as a Statistical Process. CoRR (2022)
Lena Maier-Hein, Annika Reinke, Evangelia Christodoulou, Ben Glocker, Patrick Godau, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A. Riegler, Manuel Wiesenfarth, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A. Emre Kavur, Tim Rädsch, Minu Dietlinde Tizabi, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Peter Bankhead, Arriel Benis, M. Jorge Cardoso, Veronika Cheplygina, Beth Cimini, Gary S. Collins, Keyvan Farahani, Bram van Ginneken, Daniel A. Hashimoto, Michael M. Hoffman, Merel Huisman, Pierre Jannin, Charles E. Kahn, Alexandros Karargyris, Alan Karthikesalingam, Hannes Kenngott, Annette Kopp-Schneider, Anna Kreshuk, Tahsin M. Kurç, Bennett A. Landman, Geert Litjens, Amin Madani, Klaus H. Maier-Hein, Anne L. Martel, Peter Mattson, Erik Meijering, Bjoern H. Menze, David Moher, Karel G. M. Moons, Henning Müller, Felix Nickel, Brennan Nichyporuk, Jens Petersen, Nasir Rajpoot, Nicola Rieke, Julio Saez-Rodriguez, Clarisa Sánchez Gutiérrez, Shravya Shetty, Maarten van Smeden, Carole H. Sudre, Ronald M. Summers, Abdel A. Taha, Sotirios A. Tsaftaris, Ben Van Calster, Gaël Varoquaux, Paul F. Jäger
Metrics reloaded: Pitfalls and recommendations for image analysis validation. CoRR (2022)
Jens Petersen, Fabian Isensee, Gregor Köhler, Paul F. Jäger, David Zimmerer, Ulf Neuberger, Wolfgang Wick, Jürgen Debus, Sabine Heiland, Martin Bendszus, Philipp Vollmuth, Klaus H. Maier-Hein
Continuous-Time Deep Glioma Growth Models. CoRR (2021)
Jens Petersen, Fabian Isensee, Gregor Köhler, Paul F. Jäger, David Zimmerer, Ulf Neuberger, Wolfgang Wick, Jürgen Debus, Sabine Heiland, Martin Bendszus, Philipp Vollmuth, Klaus H. Maier-Hein
Continuous-Time Deep Glioma Growth Models. MICCAI (3) (2021)
Jens Petersen, Gregor Köhler, David Zimmerer, Fabian Isensee, Paul F. Jäger, Klaus H. Maier-Hein
GP-ConvCNP: Better generalization for conditional convolutional Neural Processes on time series data. UAI (2021)
Michael Baumgartner, Paul F. Jäger, Fabian Isensee, Klaus H. Maier-Hein
nnDetection: A Self-configuring Method for Medical Object Detection. MICCAI (5) (2021)
Jens Petersen, Gregor Köhler, David Zimmerer, Fabian Isensee, Paul F. Jäger, Klaus H. Maier-Hein
GP-ConvCNP: Better Generalization for Convolutional Conditional Neural Processes on Time Series Data. CoRR (2021)
Peter M. Full, Fabian Isensee, Paul F. Jäger, Klaus H. Maier-Hein
Abstract: Studying Robustness of Semantic Segmentation under Domain Shift in Cardiac MRI. Bildverarbeitung für die Medizin (2021)
Jens Petersen, Paul F. Jäger, Fabian Isensee, Simon A. A. Kohl, Ulf Neuberger, Wolfgang Wick, Jürgen Debus, Sabine Heiland, Martin Bendszus, Philipp Kickingereder, Klaus H. Maier-Hein
Abstract: Deep Probabilistic Modeling of Glioma Growth. Bildverarbeitung für die Medizin (2020)
Fabian Isensee, Paul F. Jäger, Peter M. Full, Philipp Vollmuth, Klaus H. Maier-Hein
nnU-Net for Brain Tumor Segmentation. BrainLes@MICCAI (2) (2020)
Peter M. Full, Fabian Isensee, Paul F. Jäger, Klaus H. Maier-Hein
Studying Robustness of Semantic Segmentation under Domain Shift in cardiac MRI. CoRR (2020)
Peter M. Full, Fabian Isensee, Paul F. Jäger, Klaus H. Maier-Hein
Studying Robustness of Semantic Segmentation Under Domain Shift in Cardiac MRI. M&Ms and EMIDEC/STACOM@MICCAI (2020)
Jens Petersen, Paul F. Jäger, Fabian Isensee, Simon A. A. Kohl, Ulf Neuberger, Wolfgang Wick, Jürgen Debus, Sabine Heiland, Martin Bendszus, Philipp Kickingereder, Klaus H. Maier-Hein
Deep Probabilistic Modeling of Glioma Growth. MICCAI (2) (2019)
Fabian Isensee, Jens Petersen, Simon A. A. Kohl, Paul F. Jäger, Klaus H. Maier-Hein
nnU-Net: Breaking the Spell on Successful Medical Image Segmentation. CoRR (2019)
Jens Petersen, Paul F. Jäger, Fabian Isensee, Simon A. A. Kohl, Ulf Neuberger, Wolfgang Wick, Jürgen Debus, Sabine Heiland, Martin Bendszus, Philipp Kickingereder, Klaus H. Maier-Hein
Deep Probabilistic Modeling of Glioma Growth. CoRR (2019)
Jennifer Kamphenkel, Paul F. Jäger, Sebastian Bickelhaupt, Frederik Bernd Laun, Wolfgang Lederer, Heidi Daniel, Tristan Anselm Kuder, Stefan Delorme, Heinz-Peter Schlemmer, Franziska König, Klaus H. Maier-Hein
Domain Adaptation for Deviating Acquisition Protocols in CNN-Based Lesion Classification on Diffusion-Weighted MR Images. RAMBO+BIA+TIA@MICCAI (2018)