Peipei Ping

Publication Activity (10 Years)

Years Active: 2013-2024
Publications (10 Years): 16

Top Topics

Dependency Trees

Biomedical Data

Relation Extraction

Top Venues

ACL (System Demonstrations)

Publications

Alexander Russell Pelletier, Joseph Ramirez, Irsyad Adam, Simha Sankar, Yu Yan, Ding Wang, Dylan Steinecke, Wei Wang, Peipei Ping
Explainable Biomedical Hypothesis Generation via Retrieval Augmented Generation enabled Large Language Models. CoRR (2024)
Jake Chen, Peipei Ping
Health Day: Building Health AI Ecosystem: From Data Harmonization to Knowledge Discovery. KDD (2024)
Mingyu Derek Ma, Chenchen Ye, Yu Yan, Xiaoxuan Wang, Peipei Ping, Timothy S. Chang, Wei Wang
CliBench: Multifaceted Evaluation of Large Language Models in Clinical Decisions on Diagnoses, Procedures, Lab Tests Orders and Prescriptions. CoRR (2024)
Yijia Xiao, Dylan Steinecke, Alexander Russell Pelletier, Yushi Bai, Peipei Ping, Wei Wang
Know2BIO: A Comprehensive Dual-View Benchmark for Evolving Biomedical Knowledge Graphs. CoRR (2023)
Yichao Zhou, Wei-Ting Chen, Bowen Zhang, David Lee, J. Harry Caufield, Kai-Wei Chang, Yizhou Sun, Peipei Ping, Wei Wang
CREATe: Clinical Report Extraction and Annotation Technology. ICDE (2021)
Yichao Zhou, Yu Yan, Rujun Han, J. Harry Caufield, Kai-Wei Chang, Yizhou Sun, Peipei Ping, Wei Wang
Clinical Temporal Relation Extraction with Probabilistic Soft Logic Regularization and Global Inference. AAAI (2021)
Yichao Zhou, Wei-Ting Chen, Bowen Zhang, David Lee, J. Harry Caufield, Kai-Wei Chang, Yizhou Sun, Peipei Ping, Wei Wang
CREATe: Clinical Report Extraction and Annotation Technology. CoRR (2021)
Yichao Zhou, Chelsea Ju, J. Harry Caufield, Kevin Shih, Calvin Yu-Chian Chen, Yizhou Sun, Kai-Wei Chang, Peipei Ping, Wei Wang
Clinical Named Entity Recognition using Contextualized Token Representations. CoRR (2021)
Yichao Zhou, Yu Yan, Rujun Han, J. Harry Caufield, Kai-Wei Chang, Yizhou Sun, Peipei Ping, Wei Wang
Clinical Temporal Relation Extraction with Probabilistic Soft Logic Regularization and Global Inference. CoRR (2020)
Xuan Wang, Yingjun Guan, Weili Liu, Aabhas Chauhan, Enyi Jiang, Qi Li, David Liem, Dibakar Sigdel, John Caufield, Peipei Ping, Jiawei Han
EVIDENCEMINER: Textual Evidence Discovery for Life Sciences. ACL (demo) (2020)
Antonio Fabregat, Florian Korninger, Guilherme Viteri, Konstantinos Sidiropoulos, Pablo Marín-García, Peipei Ping, Guanming Wu, Lincoln Stein, Peter D'Eustachio, Henning Hermjakob
Reactome graph database: Efficient access to complex pathway data. PLoS Comput. Biol. 14 (1) (2018)
Antonio Fabregat, Konstantinos Sidiropoulos, Guilherme Viteri, Pablo Marín-García, Peipei Ping, Lincoln Stein, Peter D'Eustachio, Henning Hermjakob
Reactome diagram viewer: data structures and strategies to boost performance. Bioinform. 34 (7) (2018)
Kathleen M. Jagodnik, Simon Koplev, Sherry L. Jenkins, Lucila Ohno-Machado, Benedict Paten, Stephan C. Schürer, Michel Dumontier, Ruben Verborgh, Alex Bui, Peipei Ping, Neil J. McKenna, Ravi K. Madduri, Ajay Pillai, Avi Ma'ayan
Developing a framework for digital objects in the Big Data to Knowledge (BD2K) commons: Report from the Commons Framework Pilots workshop. J. Biomed. Informatics 71 (2017)
Konstantinos Sidiropoulos, Guilherme Viteri, Cristoffer Sevilla, Steven Jupe, Marissa Webber, Marija Orlic-Milacic, Bijay Jassal, Bruce May, Veronica Shamovsky, Corina Duenas, Karen Rothfels, Lisa Matthews, Heeyeon Song, Lincoln Stein, Robin Haw, Peter D'Eustachio, Peipei Ping, Henning Hermjakob, Antonio Fabregat
Reactome enhanced pathway visualization. Bioinform. 33 (21) (2017)
Wei Wang, Brian Bleakley, Chelsea Ju, Vincent Kyi, Patrick Tan, Howard Choi, Xinxin Huang, Yichao Zhou, Justin Wood, Ding Wang, Alex Bui, Peipei Ping
Aztec: A Platform to Render Biomedical Software Findable, Accessible, Interoperable, and Reusable. CoRR (2017)
Xiang Ren, Jiaming Shen, Meng Qu, Xuan Wang, Zeqiu Wu, Qi Zhu, Meng Jiang, Fangbo Tao, Saurabh Sinha, David Liem, Peipei Ping, Richard M. Weinshilboum, Jiawei Han
Life-iNet: A Structured Network-Based Knowledge Exploration and Analytics System for Life Sciences. ACL (System Demonstrations) (2017)
Jose M. Villaveces, Rafael C. Jimenez, Pablo Porras, Noemi del-Toro, Margaret J. Duesbury, Marine Dumousseau, Sandra E. Orchard, H. Choi, Peipei Ping, N. C. Zong, Manor Askenazi, Bianca Habermann, Henning Hermjakob
Merging and scoring molecular interactions utilising existing community standards: tools, use-cases and a case study. Database J. Biol. Databases Curation 2015 (2015)
John Gómez, Leyla J. García, Gustavo A. Salazar, Jose M. Villaveces, Swanand P. Gore, Alexander García Castro, Maria Jesus Martin, Guillaume Launay, Rafael Alcántara, Noemi del-Toro, Marine Dumousseau, Sandra E. Orchard, Sameer Velankar, Henning Hermjakob, Chenggong Zong, Peipei Ping, Manuel Corpas, Rafael C. Jimenez
BioJS: an open source JavaScript framework for biological data visualization. Bioinform. 29 (8) (2013)