Alexander García Castro

Publication Activity (10 Years)

Years Active: 2005-2020
Publications (10 Years): 5

Top Topics

Top Venues

J. Biomed. Semant.

Publications

Rutger A. Vos, Toshiaki Katayama, Hiroyuki Mishima, Shin Kawano, Shuichi Kawashima, Jin-Dong Kim, Yuki Moriya, Toshiaki Tokimatsu, Atsuko Yamaguchi, Yasunori Yamamoto, Hongyan Wu, Peter Amstutz, Erick Antezana, Nobuyuki P. Aoki, Kazuharu Arakawa, Jerven T. Bolleman, Evan E. Bolton, Raoul Jean Pierre Bonnal, Hidemasa Bono, Kees Burger, Hirokazu Chiba, Kevin Bretonnel Cohen, Eric W. Deutsch, Jesualdo Tomás Fernández-Breis, Gang Fu, Takatomo Fujisawa, Atsushi Fukushima, Alexander García Castro, Naohisa Goto, Tudor Groza, Colin Hercus, Robert Hoehndorf, Kotone Itaya, Nick S. Juty, Takeshi Kawashima, Jee-Hyub Kim, Akira R. Kinjo, Masaaki Kotera, Kouji Kozaki, Sadahiro Kumagai, Tatsuya Kushida, Thomas Lütteke, Masaaki Matsubara, Joe Miyamoto, Attayeb Mohsen, Hiroshi Mori, Yuki Naito, Takeru Nakazato, Jeremy NguyenXuan, Kozo Nishida, Naoki Nishida, Hiroyo Nishide, Soichi Ogishima, Tazro Ohta, Shujiro Okuda, Benedict Paten, Jean-Luc Perret, Philip Prathipati, Pjotr Prins, Núria Queralt-Rosinach, Daisuke Shinmachi, Shinya Suzuki, Tsuyosi Tabata, Terue Takatsuki, Kieron R. Taylor, Mark Thompson, Ikuo Uchiyama, Bruno Vieira, Chih-Hsuan Wei, Mark D. Wilkinson, Issaku Yamada, Ryota Yamanaka, Kazutoshi Yoshitake, Akiyasu C. Yoshizawa, Michel Dumontier, Kenjiro Kosaki, Toshihisa Takagi
BioHackathon 2015: Semantics of data for life sciences and reproducible research. F1000Research 9 (2020)
Leyla J. García, Erick Antezana, Alexander García Castro, Evan Bolton, Rafael C. Jimenez, Pjotr Prins, Juan M. Banda, Toshiaki Katayama
Ten simple rules to run a successful BioHackathon. PLoS Comput. Biol. 16 (5) (2020)
Alexander García Castro, Erick Antezana, Jael García, Olga L. Giraldo, Pjotr Prins, Rutger A. Vos
Shō-coin: A Knowledge-Based Economy for Life Sciences. SWAT4LS (2017)
Leyla J. García, Olga L. Giraldo, Alexander García Castro, Michel Dumontier, Bioschemas Community
Bioschemas: schema.org for the Life Sciences. SWAT4LS (2017)
Olga L. Giraldo, Alexander García Castro, Federico López, Óscar Corcho
Using semantics for representing experimental protocols. J. Biomed. Semant. 8 (1) (2017)
Leyla Jael García Castro, Rafael Berlanga Llavori, Alexander García Castro
In the pursuit of a semantic similarity metric based on UMLS annotations for articles in PubMed Central Open Access. J. Biomed. Informatics 57 (2015)
Alexander García Castro, Isabel Barth, Erich Weichselgartner
KOBPSY, a knowledge base in psychology and behavioral sciences. I-KNOW (2015)
Olga L. Giraldo, Alexander García Castro, Óscar Corcho
Using Semantics and NLP in the SMART Protocols Repository. ICBO (2015)
Andrés García-Silva, Leyla Jael García Castro, Alexander García Castro, Óscar Corcho
Building Domain Ontologies Out of Folksonomies and Linked Data. Int. J. Artif. Intell. Tools 24 (2) (2015)
Alexander García Castro, Janna Hastings, Robert Stevens, Erich Weichselgartner
Digital Scholarship and Open Science in Psychology and the Behavioral Sciences (Dagstuhl Perpectives Workshop 15302). Dagstuhl Reports 5 (7) (2015)
Olga L. Giraldo, Alexander García Castro, Óscar Corcho, Jose Figueredo
Using Semantics and NLP in Experimental Protocols. SWAT4LS (2015)
Olga L. Giraldo, Alexander García Castro, Óscar Corcho
SMART Protocols: SeMAntic RepresenTation for Experimental Protocols. LISC@ISWC (2014)
Andrés García-Silva, Leyla Jael García Castro, Alexander García Castro, Óscar Corcho
Social Tags and Linked Data for Ontology Development: A Case Study in the Financial Domain. WIMS (2014)
Manuel Corpas, Rafael C. Jiménez, Seth Carbon, Alexander García Castro, Leyla Jael Castro, Tatyana Goldberg, John Gómez, Alex Kalderimis, Suzanna E. Lewis, Ian Mulvany, Aleksandra Pawlik, Francis Rowland, Gustavo A. Salazar, Fabian Schreiber, Ian Sillitoe, William Spooner, Anil S. Thanki, Jose M. Villaveces, Guy Yachdav, Henning Hermjakob
BioJS: an open source standard for biological visualisation - its status in 2014. F1000Research 3 (2014)
Leyla Jael García Castro, Casey McLaughlin, Alexander García Castro
Biotea: RDFizing PubMed Central in support for the paper as an interface to the Web of Data. J. Biomed. Semant. 4 (S-1) (2013)
John Gómez, Leyla J. García, Gustavo A. Salazar, Jose M. Villaveces, Swanand P. Gore, Alexander García Castro, Maria Jesus Martin, Guillaume Launay, Rafael Alcántara, Noemi del-Toro, Marine Dumousseau, Sandra E. Orchard, Sameer Velankar, Henning Hermjakob, Chenggong Zong, Peipei Ping, Manuel Corpas, Rafael C. Jimenez
BioJS: an open source JavaScript framework for biological data visualization. Bioinform. 29 (8) (2013)
Nestor Velasco Bermeo, Miguel González-Mendoza, Alexander García Castro
Semantic Representation of CAD Models Based on the IGES Standard. MICAI (1) (2013)
Leyla Jael García Castro, Rafael Berlanga Llavori, Dietrich Rebholz-Schuhmann, Alexander García Castro
Connections across Scientific Publications based on Semantic Annotations. SePublica (2013)
Nestor Velasco Bermeo, Miguel González-Mendoza, Alexander García Castro, Irais Heras Dueñas
Towards the Creation of Semantic Models Based on Computer-Aided Designs. MICAI (1) (2012)
Leyla Jael García Castro, Olga L. Giraldo, Alexander García Castro
Using annotations to model discourse: an extension to the Annotation Ontology. SePublica@ESWC (2012)
Leyla Jael García Castro, Alexander García Castro, John Gómez
Conceptual Exploration of Documents and Digital Libraries in the Biomedical Domain. SWAT4LS (2012)
Gustavo A. Salazar, Rafael C. Jimenez, Alexander García Castro, Henning Hermjakob, Nicola J. Mulder, Edwin H. Blake
DAS Writeback: A Collaborative Annotation System. BMC Bioinform. 12 (2011)
Leyla Jael García Castro, Alexander García Castro
Tagsty: augmented knowledge from community-based annotations on protein sequences. SWAT4LS (2011)
Oliver Kutz, Till Mossakowski, Janna Hastings, Alexander García Castro, Aleksandra Sojic
Hyperontology for the Biomedical Ontologist: A Sketch and Some Examples. ICBO (2011)
Alexander García Castro, Olga L. Giraldo, Leyla J. García
Annotating Experimental Records Using Ontologies. ICBO (2011)
Alexander García Castro, Leyla Jael García Castro
A translational model for representing research articles. SWAT4LS (2011)
Jose M. Villaveces, Rafael C. Jimenez, Leyla J. García, Gustavo A. Salazar, Bernat Gel, Nicola J. Mulder, Maria Jesus Martin, Alexander García Castro, Henning Hermjakob
Dasty3, a WEB framework for DAS. Bioinform. 27 (18) (2011)
Leyla Jael García Castro, Olga L. Giraldo, Alexander García Castro
Using the Annotation Ontology in Semantic Digital Libraries. ISWC (Posters & Demos) (2010)
Alexander García Castro, Alberto Labarga, Leyla J. García, Olga L. Giraldo, César Montaña, John A. Bateman
Semantic Web and Social Web heading towards Living Documents in the Life Sciences. J. Web Semant. 8 (2-3) (2010)
Leyla Jael García Castro, Martin Hepp, Alexander García Castro
TagSorting: A Tagging Environment for Collaboratively Building Ontologies. EKAW (2010)
Leyla Jael García Castro, Martin Hepp, Alexander García Castro
Tags4Tags: Using Tagging to Consolidate Tags. DEXA (2009)
Alexander García Castro, Leyla Jael García Castro, Alberto Labarga, Olga L. Giraldo, César Montaña, Kieran O'Neill, John A. Bateman
Annotating Atomic Components of Papers in Digital Libraries: The Semantic and Social Web Heading towards a Living Document Supporting eSciences. DEXA (2009)
Kieran O'Neill, Alexander García Castro, Anita Schwegmann, Rafael C. Jimenez, Dan Jacobson, Henning Hermjakob
OntoDas - a tool for facilitating the construction of complex queries to the Gene Ontology. BMC Bioinform. 9 (2008)
Alexander García Castro, Angela Norena, Andres Betancourt, Leyla J. García
CMAPS Supporting the Development of OWL Ontologies. ISWC (Posters & Demos) (2008)
Dionysios D. Kehagias, Alexander García Castro, Dimitrios Tzovaras, Dimitrios Giakoumis
A Semantic Web Service Alignment Tool. ISWC (Posters & Demos) (2008)
Rafael C. Jimenez, Antony F. Quinn, Alexander García Castro, Alberto Labarga, Kieran O'Neill, Fernando Martinez, Gustavo A. Salazar, Henning Hermjakob
Dasty2, an Ajax protein DAS client. Bioinform. 24 (18) (2008)
Alexander García Castro, Philippe Rocca-Serra, Robert Stevens, Chris F. Taylor, Karim Nashar, Mark A. Ragan, Susanna-Assunta Sansone
The use of concept maps during knowledge elicitation in ontology development processes - the nutrigenomics use case. BMC Bioinform. 7 (2006)
Alexander García Castro, Samuel Thoraval, Leyla J. García, Mark A. Ragan
Workflows in bioinformatics: meta-analysis and prototype implementation of a workflow generator. BMC Bioinform. 6 (2005)