Nansu Zong

Publication Activity (10 Years)

Years Active: 2009-2024
Publications (10 Years): 33

Top Topics

Equivalence Relation

Top Venues

J. Am. Medical Informatics Assoc.

Publications

Shaika Chowdhury, Yongbin Chen, Pengyang Li, Sivaraman Rajaganapathy, Andrew Wen, Xiao Ma, Qiying Dai, Yue Yu, Sunyang Fu, Xiaoqian Jiang, Zhe He, Sunghwan Sohn, Xiaoke Liu, Suzette J. Bielinski, Alanna M. Chamberlain, James R. Cerhan, Nansu Zong
Stratifying heart failure patients with graph neural network and transformer using Electronic Health Records to optimize drug response prediction. J. Am. Medical Informatics Assoc. 31 (8) (2024)
Sunyang Fu, Liwei Wang, Huan He, Andrew Wen, Nansu Zong, Anamika Kumari, Feifan Liu, Sicheng Zhou, Rui Zhang, Chenyu Li, Yanshan Wang, Jennifer St Sauver, Hongfang Liu, Sunghwan Sohn
A taxonomy for advancing systematic error analysis in multi-site electronic health record-based clinical concept extraction. J. Am. Medical Informatics Assoc. 31 (7) (2024)
Kritib Bhattarai, Sivaraman Rajaganapathy, Trisha Das, Yejin Kim, Yongbin Chen, Qiying Dai, Xiaoyang Li, Xiaoqian Jiang, Nansu Zong
Using artificial intelligence to learn optimal regimen plan for Alzheimer's disease. J. Am. Medical Informatics Assoc. 30 (10) (2023)
Ziyi Chen, Ren Yang, Sunyang Fu, Nansu Zong, Hongfang Liu, Ming Huang
Detecting Reddit Users with Depression Using a Hybrid Neural Network. CoRR (2023)
Shaika Chowdhury, Sivaraman Rajaganapathy, Lichao Sun, James R. Cerhan, Nansu Zong
Evaluation of GPT-3 for Anti-Cancer Drug Sensitivity Prediction. CoRR (2023)
Kritib Bhattarai, Sivaraman Rajaganapathy, Trisha Das, Yejin Kim, Yongbin Chen, Qiying Dai, Xiaoyang Li, Xiaoqian Jiang, Nansu Zong
Learning Physician's Treatment for Alzheimer's Disease based on Electronic Health Records and Reinforcement Learning. ICHI (2023)
Guohui Xiao, Emily R. Pfaff, Eric Prud'hommeaux, David Booth, Deepak K. Sharma, Nan Huo, Yue Yu, Nansu Zong, Kathryn J. Ruddy, Christopher G. Chute, Guoqian Jiang
FHIR-Ontop-OMOP: Querying OMOP clinical databases as FHIR-compliant Clinical Knowledge Graphs. SWAT4HCLS (2023)
Shaika Chowdhury, Yongbin Chen, Xiao Ma, Qiying Dai, Yue Yu, Nansu Zong
Evaluating Drug Effectiveness for Antihypertensives in Heart Failure Prognosis: Leveraging Composite Clinical Endpoints and Biomarkers from Electronic Health Records. BCB (2023)
Ming Huang, Aditya Khurana, George M. Mastorakos, Jiawei Zhou, Nansu Zong, Yue Yu, Julie E. Prigge, Christi A. Patten, Hongfang Liu, Brian Costello
Characterizing the Users of Patient Portal Messaging: A Single Institutional Cohort Study. ICHI (2023)
Ziyi Chen, Ren Yang, Sunyang Fu, Nansu Zong, Hongfang Liu, Ming Huang
Detecting Reddit Users with Depression Using a Hybrid Neural Network SBERT-CNN. ICHI (2023)
Yang Ren, Dezhi Wu, Aditya Khurana, George M. Mastorakos, Sunyang Fu, Nansu Zong, Jungwei Fan, Hongfang Liu, Ming Huang
Classification of Patient Portal Messages with BERT-based Language Models. ICHI (2023)
Nansu Zong, Victoria Ngo
Computational Drug Target Prediction: Benchmark and Experiments. ICHI (2022)
Guohui Xiao, Emily R. Pfaff, Eric Prud'hommeaux, David Booth, Deepak K. Sharma, Nan Huo, Yue Yu, Nansu Zong, Kathryn J. Ruddy, Christopher G. Chute, Guoqian Jiang
FHIR-Ontop-OMOP: Building clinical knowledge graphs in FHIR RDF with the OMOP Common data Model. J. Biomed. Informatics 134 (2022)
Yue Yu, Kathryn J. Ruddy, Nan Huo, Nansu Zong, Deirdre Pachman, Christopher G. Chute, Emily R. Pfaff, Andrea Cheville, Guoqian Jiang
A Comparative Study on the Capability of Real-World Antineoplastic Drug Data Collection by CanMED, ATC and HemOnc. AMIA (2022)
Yue Yu, Nansu Zong, Andrew Wen, Sijia Liu, Daniel J. Stone, David Knaack, Alanna M. Chamberlain, Emily R. Pfaff, Davera Gabriel, Christopher G. Chute, Nilay Shah, Guoqian Jiang
Developing an ETL tool for converting the PCORnet CDM into the OMOP CDM to facilitate the COVID-19 data integration. J. Biomed. Informatics 127 (2022)
Nansu Zong, Andrew Wen, Sungrim Moon, Sunyang Fu, Liwei Wang, Yiqing Zhao, Yue Yu, Ming Huang, Yanshan Wang, Gang Zheng, Michelle M. Mielke, James R. Cerhan, Hongfang Liu
Computational drug repurposing based on electronic health records: a scoping review. npj Digit. Medicine 5 (2022)
Jie Na, Nansu Zong, Chen Wang, David E. Midthun, Yuan Luo, Ping Yang, Guoqian Jiang
Correction to: Characterizing phenotypic abnormalities associated with high-risk individuals developing lung cancer using electronic health records from the All of Us researcher workbench. J. Am. Medical Informatics Assoc. 29 (6) (2022)
Nansu Zong, Ning Li, Andrew Wen, Victoria Ngo, Yue Yu, Ming Huang, Shaika Chowdhury, Chao Jiang, Sunyang Fu, Richard Weinshilboum, Guoqian Jiang, Lawrence Hunter, Hongfang Liu
BETA: a comprehensive benchmark for computational drug-target prediction. Briefings Bioinform. 23 (4) (2022)
Nan Huo, Yue Yu, Nansu Zong, Andrea Cheville, Claude Nanjo, Eric Prud'hommeaux, Deirdre Pachman, Guohui Xiao, Emily R. Pfaff, Christopher G. Chute, Guoqian Jiang, Kathryn J. Ruddy
Modeling a Cancer Symptom Control Domain Using HL7 FHIR: Applicability of the Minimal Common Oncology Data Elements (mCODE). AMIA (2022)
Daniel J. Stone, Sijia Liu, Yuan Luo, Andrew Wen, Nansu Zong, Luke V. Rasmussen, Prakash Adekkanattu, Pascal S. Brandt, Jennifer A. Pacheco, Fei Wang, Cui Tao, Jyotishman Pathak, Hongfang Liu, Guoqian Jiang
FHIRTime: Standardizing Temporal Patterns Identified from Clinical Narratives Using HL7 FHIR. AMIA (2021)
Ming Huang, Andrew Wen, Huan He, Liwei Wang, Sijia Liu, Yanshan Wang, Nansu Zong, Yue Yu, Julie Prigge, Brian Costello, Nilay D. Shah, Henry Ting, Chyke Doubeni, Jungwei Fan, Hongfang Liu, Christi Patten
Disparity analysis of patient portal messaging use for COVID-19 in urban versus rural locality. AMIA (2021)
Chao Jiang, Victoria Ngo, Richard Chapman, Hongfang Liu, Guoqian Jiang, Nansu Zong
Automatic Construction of Biomedical Knowledge Graph from Covid-19 Literature. AMIA (2021)
Sunyang Fu, Andrew Wen, Sandeep R. Pagali, Nansu Zong, Jennifer St Sauver, Sunghwan Sohn, Jungwei Fan, Hongfang Liu
The Implication of Latent Information Quality to the Reproducibility of Secondary Use of Electronic Health Records. MedInfo (2021)
Nansu Zong, Daniel J. Stone, Deepak K. Sharma, Andrew Wen, Chen Wang, Yue Yu, Ming Huang, Sijia Liu, Hongfang Liu, Qian Shi, Guoqian Jiang
Modeling cancer clinical trials using HL7 FHIR to support downstream applications: A case study with colorectal cancer data. Int. J. Medical Informatics 145 (2021)
Jie Na, Nansu Zong, Chen Wang, David E. Midthun, Yuan Luo, Ping Yang, Guoqian Jiang
Characterizing phenotypic abnormalities associated with high-risk individuals developing lung cancer using electronic health records from the All of Us researcher workbench. J. Am. Medical Informatics Assoc. 28 (11) (2021)
Nansu Zong, Rachael Sze Nga Wong, Yue Yu, Andrew Wen, Ming Huang, Ning Li
Drug-target prediction utilizing heterogeneous bio-linked network embeddings. Briefings Bioinform. 22 (1) (2021)
Xiaoling Chen, Anupama E. Gururaj, Ibrahim Burak Özyurt, Ruiling Liu, Ergin Soysal, Trevor Cohen, Firat Tiryaki, Yueling Li, Nansu Zong, Min Jiang, Deevakar Rogith, Mandana Salimi, Hyeon-Eui Kim, Philippe Rocca-Serra, Alejandra N. González-Beltrán, Claudiu Farcas, Todd Johnson, Ronald Margolis, George Alter, Susanna-Assunta Sansone, Ian Fore, Lucila Ohno-Machado, Jeffrey S. Grethe, Hua Xu
DataMed - an open source discovery index for finding biomedical datasets. J. Am. Medical Informatics Assoc. 25 (3) (2018)
Jinhyun Ahn, Jae-Hong Eom, Sejin Nam, Nansu Zong, Dong-Hyuk Im, Hong-Gee Kim
xStore: Federated temporal query processing for large scale RDF triples on a cloud environment. Neurocomputing 256 (2017)
Ethan Park, Diana Guijarro, Imho Jang, Stephen Trac, Nansu Zong, Hyeoneui Kim
Explorative Analyses on Indexing OMOP based Clinical Datasets with DATS. AMIA (2017)
Nansu Zong, Hyeoneui Kim, Victoria Ngo, Olivier Harismendy
Deep mining heterogeneous networks of biomedical linked data to predict novel drug-target associations. Bioinform. 33 (15) (2017)
Nansu Zong, Hong-Gee Kim, Sejin Nam
Constructing faceted taxonomy for heterogeneous entities based on object properties in linked data. Data Knowl. Eng. 112 (2017)
Nansu Zong, Sungin Lee, Jinhyun Ahn, Hong-Gee Kim
Supporting inter-topic entity search for biomedical Linked Data based on heterogeneous relationships. Comput. Biol. Medicine 87 (2017)
Sejin Nam, Senator Jeong, Sang-Kyun Kim, Hong-Gee Kim, Victoria Ngo, Nansu Zong
Structuralizing biomedical abstracts with discriminative linguistic features. Comput. Biol. Medicine 79 (2016)
Nansu Zong, Sungin Lee, Hong-Gee Kim
Discovering expansion entities for keyword-based entity search in linked data. J. Inf. Sci. 41 (2) (2015)
Nansu Zong, Sejin Nam, Jae-Hong Eom, Jinhyun Ahn, Hyunwhan Joe, Hong-Gee Kim
Aligning ontologies with subsumption and equivalence relations in Linked Data. Knowl. Based Syst. 76 (2015)
Jinhyun Ahn, Dong-Hyuk Im, Jae-Hong Eom, Nansu Zong, Hong-Gee Kim
G-Diff: A Grouping Algorithm for RDF Change Detection on MapReduce. JIST (2014)
Nansu Zong, Sungin Lee, Hong-Gee Kim
A Comparison of Unsupervised Taxonomical Relationship Induction Approaches for Building Ontology in RDF Resources. JIST (2013)
Dong-Hyuk Im, Nansu Zong, Eung-Hee Kim, Seokchan Yun, Hong-Gee Kim
A hypergraph-based storage policy for RDF version management system. ICUIMC (2012)
Nansu Zong, Dong-Hyuk Im, Sung-Kwon Yang, Hyun Namgoong, Hong-Gee Kim
Dynamic generation of concepts hierarchies for knowledge discovering in bio-medical linked data sets. ICUIMC (2012)
Nansu Zong, Sung-Kwon Yang, Hyun Namgoong, Hong-Gee Kim
Discovering and Ranking New Links for Linked Data Supplier. JIST (2011)
Nansu Zong, Yelu Zheng, Zhong Wang
A SWRL Rules Parser Algorithm Based on the Topic Semantic Comparability and Ant Colony Algorithm. FSKD (2) (2009)