Lawrence Hunter

ORCID

Publication Activity (10 Years)

Years Active: 1977-2024
Publications (10 Years): 13

Top Venues

Publications

Sagi Shaier, Kevin Bennett, Lawrence Hunter, Katharina von der Wense
Comparing Template-based and Template-free Language Model Probing. EACL (1) (2024)
Sagi Shaier, Lawrence Hunter, Katharina von der Wense
It Is Not About What You Say, It Is About How You Say It: A Surprisingly Simple Approach for Improving Reading Comprehension. ACL (Findings) (2024)
Sagi Shaier, Lawrence Hunter, Katharina von der Wense
Desiderata For The Context Use Of Question Answering Systems. EACL (1) (2024)
Sagi Shaier, Kevin Bennett, Lawrence Hunter, Katharina Kann
Emerging Challenges in Personalized Medicine: Assessing Demographic Effects on Biomedical Question Answering Systems. IJCNLP (1) (2023)
Hector Zenil, Jesper Tegnér, Felipe S. Abrahão, Alexander Lavin, Vipin Kumar, Jeremy G. Frey, Adrian Weller, Larisa N. Soldatova, Alan R. Bundy, Nicholas R. Jennings, Koichi Takahashi, Lawrence Hunter, Saso Dzeroski, Andrew Briggs, Frederick D. Gregory, Carla P. Gomes, Christopher K. I. Williams, Jon Rowe, James A. Evans, Hiroaki Kitano, Joshua B. Tenenbaum, Ross D. King
The Future of Fundamental Science Led by Generative Closed-Loop Artificial Intelligence. CoRR (2023)
Sagi Shaier, Lawrence Hunter, Katharina Kann
Who Are All The Stochastic Parrots Imitating? They Should Tell Us! IJCNLP (2) (2023)
Sagi Shaier, Kevin Bennett, Lawrence Hunter, Katharina von der Wense
Emerging Challenges in Personalized Medicine: Assessing Demographic Effects on Biomedical Question Answering Systems. CoRR (2023)
Sagi Shaier, Lawrence Hunter, Katharina Kann
Mind the Knowledge Gap: A Survey of Knowledge-enhanced Dialogue Systems. CoRR (2022)
Tiffany J. Callahan, Adrianne L. Stefanski, Danielle Ostendorf, Jordan M. Wyrwa, Sara J. Deakyne Davies, George Hripcsak, Lawrence Hunter, Michael G. Kahn
Characterizing Patient Representations for Computational Phenotyping. AMIA (2022)
Nansu Zong, Ning Li, Andrew Wen, Victoria Ngo, Yue Yu, Ming Huang, Shaika Chowdhury, Chao Jiang, Sunyang Fu, Richard Weinshilboum, Guoqian Jiang, Lawrence Hunter, Hongfang Liu
BETA: a comprehensive benchmark for computational drug-target prediction. Briefings Bioinform. 23 (4) (2022)
Russ B. Altman, A. Keith Dunker, Lawrence Hunter, Marylyn D. Ritchie, Tiffany Murray, Teri E. Klein
Biocomputing 2021: Proceedings of the Pacific Symposium, Kohala Coast, Hawaii, USA, January 3-7, 2021 PSB (2020)
William A. Baumgartner Jr., Michael Bada, Sampo Pyysalo, Manuel R. Ciosici, Negacy D. Hailu, Harrison Pielke-Lombardo, Michael Regan, Lawrence Hunter
CRAFT Shared Tasks 2019 Overview - Integrated Structure, Semantics, and Coreference. BioNLP-OST@EMNLP-IJNCLP (2019)
Michael Bada, Nicole A. Vasilevsky, Melissa A. Haendel, Lawrence Hunter
Gold-Standard Ontology-Based Annotation of Concepts in Biomedical Text in the CRAFT Corpus: Updates and Extensions. ICBO/BioCreative (2016)
Sheelagh Carpendale, Min Chen, Daniel Evanko, Nils Gehlenborg, Carsten Görg, Lawrence Hunter, Francis Rowland, Margaret-Anne D. Storey, Hendrik Strobelt
Ontologies in Biological Data Visualization. IEEE Computer Graphics and Applications 34 (2) (2014)
Lawrence Hunter
Computational Challenges of Mass Phenotyping. Pacific Symposium on Biocomputing (2013)
Timothy W. Clark, William W. Cohen, Lawrence Hunter, Chris J. Lintott, Jude W. Shavlik
Invited Talks. AAAI Fall Symposium: Discovery Informatics (2012)
Carsten Görg, Lawrence Hunter, Jessie Kennedy, Seán I. O'Donoghue, Jarke J. van Wijk
Biological Data Visualization (Dagstuhl Seminar 12372). Dagstuhl Reports 2 (9) (2012)
Michael Bada, Lawrence Hunter
Desiderata for ontologies to be used in semantic annotation of biomedical documents. J. Biomed. Informatics 44 (1) (2011)
K. Bretonnel Cohen, Lawrence Hunter, Martha Palmer
A scaleable automated quality assurance technique for semantic representations and proposition banks. Linguistic Annotation Workshop (2011)
Elizabeth K. White, K. Bretonnel Cohen, Lawrence Hunter
Hypothesis and Evidence Extraction from Full-Text Scientific Journal Articles. BioNLP@ACL (2011)
K. Bretonnel Cohen, Tom Christiansen, William A. Baumgartner Jr., Karin Verspoor, Lawrence Hunter
Fast and simple semantic class assignment for biomedical text. BioNLP@ACL (2011)
K. Bretonnel Cohen, Karin Verspoor, Helen L. Johnson, Christophe Roeder, Philip V. Ogren, William A. Baumgartner Jr., Elizabeth K. White, Hannah J. Tipney, Lawrence Hunter
High-Precision Biological Event Extraction: Effects of System and of Data. Comput. Intell. 27 (4) (2011)
Yoshinobu Kano, Makoto Miwa, K. Bretonnel Cohen, Lawrence Hunter, Sophia Ananiadou, Jun'ichi Tsujii
U-Compare: A modular NLP workflow construction and evaluation system. IBM J. Res. Dev. 55 (3) (2011)
Michael Bada, Miriam Eckert, Martha Palmer, Lawrence Hunter
An Overview of the CRAFT Concept Annotation Guidelines. Linguistic Annotation Workshop (2010)
Carsten Görg, Hannah J. Tipney, Karin Verspoor, William A. Baumgartner Jr., K. Bretonnel Cohen, John T. Stasko, Lawrence Hunter
Visualization and Language Processing for Supporting Analysis across the Biomedical Literature. KES (4) (2010)
K. Bretonnel Cohen, Christophe Roeder, William A. Baumgartner Jr., Lawrence Hunter, Karin Verspoor
Test Suite Design for Biomedical Ontology Concept Recognition Systems. LREC (2010)
Christophe Roeder, Clément Jonquet, Nigam H. Shah, William A. Baumgartner Jr., Karin Verspoor, Lawrence Hunter
A UIMA wrapper for the NCBO annotator. Bioinform. 26 (14) (2010)
Adrien Coulet, Nigam H. Shah, Lawrence Hunter, Chitta Baral, Russ B. Altman
Extraction of Genotype-Phenotype-Drug Relationships from Text: From Entity Recognition to Bioinformatics Application. Pacific Symposium on Biocomputing (2010)
Kevin M. Livingston, Helen L. Johnson, Karin Verspoor, Lawrence Hunter
Leveraging Gene Ontology Annotations to Improve a Memory-Based Language Understanding System. ICSC (2010)
Karin Verspoor, Christophe Roeder, Helen L. Johnson, K. Bretonnel Cohen, William A. Baumgartner Jr., Lawrence Hunter
Exploring Species-Based Strategies for Gene Normalization. IEEE ACM Trans. Comput. Biol. Bioinform. 7 (3) (2010)
K. Bretonnel Cohen, Helen L. Johnson, Karin Verspoor, Christophe Roeder, Lawrence Hunter
The structural and content aspects of abstracts versus bodies of full text journal articles are different. BMC Bioinform. 11 (2010)
Yves A. Lussier, Atul J. Butte, Lawrence Hunter
Current methodologies for translational bioinformatics. J. Biomed. Informatics 43 (3) (2010)
Yoshinobu Kano, William A. Baumgartner Jr., Luke McCrohon, Sophia Ananiadou, K. Bretonnel Cohen, Lawrence Hunter, Jun'ichi Tsujii
U-Compare: share and compare text mining tools with UIMA. Bioinform. 25 (15) (2009)
Karin Verspoor, K. Bretonnel Cohen, Lawrence Hunter
The textual characteristics of traditional and Open Access scientific journals are similar. BMC Bioinform. 10 (2009)
Hannah J. Tipney, Sonia M. Leach, Weiguo Feng, Richard A. Spritz, Trevor Williams, Lawrence Hunter
Leveraging existing biological knowledge in the identification of candidate genes for facial dysmorphology. BMC Bioinform. 10 (S-2) (2009)
Edward H. Shortliffe, Andrea Califano, Lawrence Hunter
New JBI emphasis on translational bioinformatics. J. Biomed. Informatics 42 (2) (2009)
Karin Verspoor, Daniel Dvorkin, K. Bretonnel Cohen, Lawrence Hunter
Ontology quality assurance through analysis of term transformations. Bioinform. 25 (12) (2009)
John T. Stasko, Sarah Cohen, Lawrence Hunter, Joe Parry
How interactive visualization can assist investigative analysis: Views and perspectives from domain experts. IEEE VAST (2009)
Sonia M. Leach, Hannah J. Tipney, Weiguo Feng, William A. Baumgartner Jr., Priyanka Kasliwal, Ronald P. Schuyler, Trevor Williams, Richard A. Spritz, Lawrence Hunter
Biomedical Discovery Acceleration, with Applications to Craniofacial Development. PLoS Comput. Biol. 5 (3) (2009)
K. Bretonnel Cohen, Karin Verspoor, Helen L. Johnson, Christophe Roeder, Philip V. Ogren, William A. Baumgartner Jr., Elizabeth K. White, Lawrence Hunter
High-precision biological event extraction with a concept recognizer. BioNLP@HLT-NAACL (Shared Task) (2009)
K. Bretonnel Cohen, William A. Baumgartner Jr., Lawrence Hunter
Software Testing and the Naturally Occurring Data Assumption in Natural Language Processing. SETQALNLP (2008)
Michael Bada, Lawrence Hunter
Identification of OBO nonalignments and its implications for OBO enrichment. Bioinform. 24 (12) (2008)
J. Gregory Caporaso, Nita Deshpande, J. Lynn Fink, Philip E. Bourne, K. Bretonnel Cohen, Lawrence Hunter
Intrinsic Evaluation of Text Mining Tools May Not Predict Performance on Realistic Tasks. Pacific Symposium on Biocomputing (2008)
Aaron Gabow, Sonia M. Leach, William A. Baumgartner Jr., Lawrence Hunter, Debra Goldberg
Improving protein function prediction methods with integrated literature data. BMC Bioinform. 9 (2008)
Lawrence Hunter, Zhiyong Lu, James Firby, William A. Baumgartner Jr., Helen L. Johnson, Philip V. Ogren, K. Bretonnel Cohen
OpenDMAP: An open source, ontology-driven concept analysis engine, with applications to capturing knowledge regarding protein transport, protein interactions and cell-type-specific gene expression. BMC Bioinform. 9 (2008)
Michael Bada, Chris Mungall, Lawrence Hunter
A Call for an Abductive Reasoning Feature in OWL-Reasoning Tools toward Ontology Quality Control. OWLED (2008)
Anis Karimpour-Fard, Sonia M. Leach, Ryan T. Gill, Lawrence Hunter
Predicting protein linkages in bacteria: Which method is best depends on task. BMC Bioinform. 9 (2008)
K. Bretonnel Cohen, Lawrence Hunter
Getting Started in Text Mining. PLoS Comput. Biol. 4 (1) (2008)
Steven Bethard, Zhiyong Lu, James H. Martin, Lawrence Hunter
Semantic role labeling for protein transport predicates. BMC Bioinform. 9 (2008)
Michael Bada, Lawrence Hunter
Enrichment of OBO ontologies. J. Biomed. Informatics 40 (3) (2007)
Zhiyong Lu, K. Bretonnel Cohen, Lawrence Hunter
Generif Quality Assurance as Summary Revision. Pacific Symposium on Biocomputing (2007)
J. Gregory Caporaso, William A. Baumgartner Jr., David A. Randolph, K. Bretonnel Cohen, Lawrence Hunter
MutationFinder: a high-performance system for extracting point mutation mentions from text. Bioinform. 23 (14) (2007)
Helen L. Johnson, K. Bretonnel Cohen, Lawrence Hunter
A Fault Model for Ontology Mapping, Alignment, and Linking Systems. Pacific Symposium on Biocomputing (2007)
William A. Baumgartner Jr., K. Bretonnel Cohen, Lynne M. Fox, George K. Acquaah-Mensah, Lawrence Hunter
Manual curation is not sufficient for annotation of genomic databases. ISMB/ECCB (Supplement of Bioinformatics) (2007)
J. Gregory Caporaso, William A. Baumgartner Jr., David A. Randolph, K. Bretonnel Cohen, Lawrence Hunter
Rapid Pattern Development for Concept Recognition Systems: Application to Point mutations. J. Bioinform. Comput. Biol. 5 (6) (2007)
Sonia M. Leach, Aaron Gabow, Lawrence Hunter, Debra Goldberg
Assessing and Combining Reliability of Protein Interaction Sources. Pacific Symposium on Biocomputing (2007)
Hyunmin Kim, Katherina J. Kechris, Lawrence Hunter
Mining Discriminative Distance Context of Transcription Factor Binding Sites on ChIP Enriched Regions. ISBRA (2007)
Lawrence Hunter, Russ B. Altman, Philip E. Bourne
The International Society for Computational Biology 10th Anniversary. PLoS Comput. Biol. 3 (6) (2007)
Helen L. Johnson, William A. Baumgartner Jr., Martin Krallinger, K. Bretonnel Cohen, Lawrence Hunter
Refactoring Corpora. BioNLP@NAACL-HLT (2006)
K. Bretonnel Cohen, Lawrence Hunter
A critical review of PASBio's argument structures for biomedical verbs. BMC Bioinform. 7 (S-3) (2006)
J. Gregory Caporaso, William A. Baumgartner Jr., Hyunmin Kim, Zhiyong Lu, Helen L. Johnson, Olga Medvedeva, Anna Lindemann, Lynne M. Fox, Elizabeth K. White, K. Bretonnel Cohen, Lawrence Hunter
Concept Recognition, Information Retrieval, and Machine Learning in Genomics Question-Answering. TREC (2006)
Helen L. Johnson, K. Bretonnel Cohen, William A. Baumgartner Jr., Zhiyong Lu, Michael Bada, Todd Kester, Hyunmin Kim, Lawrence Hunter
Evaluation of Lexical Methods for Detecting Relationships Between Concepts from Multiple Ontologies. Pacific Symposium on Biocomputing (2006)
K. Bretonnel Cohen, Lawrence Hunter
A critical review of PASBio's argument structures for biomedical verbs. SMBM (2006)
Zhiyong Lu, K. Bretonnel Cohen, Lawrence Hunter
Finding GeneRIFs via Gene Ontology Annotations. Pacific Symposium on Biocomputing (2006)
K. Bretonnel Cohen, Philip V. Ogren, Lynne M. Fox, Lawrence Hunter
Empirical data on corpus design and usage in biomedical natural language processing. AMIA (2005)
Zhiyong Lu, Lawrence Hunter
GO Molecular Function Terms Are Predictive of Subcellular Localization. Pacific Symposium on Biocomputing (2005)
Russ B. Altman, A. Keith Dunker, Lawrence Hunter, Teri E. Klein
Preface. Pacific Symposium on Biocomputing (2005)
J. Gregory Caporaso, William A. Baumgartner Jr., K. Bretonnel Cohen, Helen L. Johnson, Jesse Paquette, Lawrence Hunter
Concept Recognition and the TREC Genomics Tasks. TREC (2005)
Shuhei Kinoshita, K. Bretonnel Cohen, Philip V. Ogren, Lawrence Hunter
BioCreAtIvE Task1A: entity identification with a stochastic tagger. BMC Bioinform. 6 (S-1) (2005)
K. Bretonnel Cohen, Lynne M. Fox, Philip V. Ogren, Lawrence Hunter
Corpus Design for Biomedical Natural Language Processing. LBLODMBS@IDMB (2005)
Philip V. Ogren, K. Bretonnel Cohen, Lawrence Hunter
Implications of Compositionality in the Gene Ontology for Its Curation and Usage . Pacific Symposium on Biocomputing (2005)
Lawrence Hunter
Life and Its Molecules: A Brief Introduction. AI Mag. 25 (1) (2004)
Philip V. Ogren, K. Bretonnel Cohen, George K. Acquaah-Mensah, Jens Eberlein, Lawrence Hunter
The Compositional Structure of Gene Ontology Terms. Pacific Symposium on Biocomputing (2004)
Russ B. Altman, A. Keith Dunker, Lawrence Hunter, Teri E. Klein
Preface. Pacific Symposium on Biocomputing (2004)
Min Hong, Anis Karimpour-Fard, Steve Russell, Lawrence Hunter
Integrated Term Weighting, Visualization, and User Interface Development for Bioinformation Retrieval. AIS (2004)
Russ B. Altman, A. Keith Dunker, Lawrence Hunter, Teri E. Klein
Preface. Pacific Symposium on Biocomputing (2003)
Eric W. Brown, Andrew Dolbey, Lawrence Hunter
IBM Research and the University of Colorado - TREC 2003 Genomics Track. TREC (2003)
Russ B. Altman, A. Keith Dunker, Lawrence Hunter, Teri E. Klein
Special Paper - Introduction. Pacific Symposium on Biocomputing (2003)
Tzu L. Phang, Margaret C. Neville, Michael Rudolph, Lawrence Hunter
Trajectory Clustering: A Non-Parametric Method for Grouping Gene Expression Time Courses with Applications to Mammary Development. Pacific Symposium on Biocomputing (2003)
Russ B. Altman, A. Keith Dunker, Lawrence Hunter, Teri E. Klein
Preface. Pacific Symposium on Biocomputing (2002)
K. Bretonnel Cohen, Andrew Dolbey, George K. Acquaah-Mensah, Lawrence Hunter
Contrast and variability in gene names. ACL Workshop on Natural Language Processing in the Biomedical Domain (2002)
Lawrence Hunter, Richard H. Lathrop
Guest Editors' Introduction-Computer Science and Biology: An Unlikely Pair. IEEE Intell. Syst. 17 (2) (2002)
Mary E. Edgerton, Ronald C. Taylor, John I. Powell, Lawrence Hunter, Richard Simon, Edison T. Liu
A bioinformatics tool to select sequences for microarray studies of mouse models of oncogenesis. Bioinform. 18 (5) (2002)
Lawrence Hunter, Ronald C. Taylor, Sonia M. Leach, Richard Simon
GEST: a gene expression search tool based on a novel Bayesian similarity metric. ISMB (Supplement of Bioinformatics) (2001)
Thomas C. Rindflesch, Jayant V. Rajan, Lawrence Hunter
Extracting Molecular Binding Relationships from Biomedical Text. ANLP (2000)
Sonia M. Leach, Lawrence Hunter, David Landsman
Comparison of Clustering Metrics and Unsupervised Learning Algorithms on Genome-Wide Gene Expression Level Data. AAAI/IAAI (1999)
Thomas C. Rindflesch, Lawrence Hunter, Alan R. Aronson
Mining molecular binding terminology from biomedical text. AMIA (1999)
Imran Shah, Lawrence Hunter
Identification of Divergent Functions in Homologous Proteins by Induction over Conserved Modules. ISMB (1998)
Jeffrey L. Krichmar, Giorgio A. Ascoli, Lawrence Hunter, James Leland Olds
A Model of Cerebellar Saccadic Motor Learning Using Qualitative Reasoning. IWANN (1997)
Lawrence Hunter, Barry Zeeberg
Identifying Chimerism in Proteins Using Hidden Markov Models of Codon Usage. ISMB (1997)
Imran Shah, Lawrence Hunter
Predicting Enzyme Function from Sequence: A Systematic Appraisal. ISMB (1997)
Jude W. Shavlik, Lawrence Hunter, David B. Searls
Introduction. Mach. Learn. 21 (1-2) (1995)
David B. Searls, Jude W. Shavlik, Lawrence Hunter
The First International Conference on Intelligent Systems for Molecular Biology. AI Mag. 15 (1) (1994)
David J. States, Nomi L. Harris, Lawrence Hunter
Computationally Efficient Cluster Representation in Molecular Sequence Megaclassification. ISMB (1993)
Hiroaki Kitano, Walther von Hahn, Lawrence Hunter, Ryuichi Oka, Benjamin W. Wah, Toshio Yokoi
Grand Challenge AI Applications. IJCAI (1993)
Lawrence Hunter, Teri E. Klein
Finding Relevant Biomolecular Features. ISMB (1993)
Lawrence Hunter
Artificial Intelligence and Molecular Biology. AAAI (1992)
Ashwin Ram, Lawrence Hunter
The use of explicit goals for knowledge to guide inference and learning. Appl. Intell. 2 (1) (1992)
Lawrence Hunter, David J. States
Bayesian Classification of Protein Structure. IEEE Expert 7 (4) (1992)
Lawrence Hunter, Nomi L. Harris, David J. States
Efficient Classification of Massive, Unsegmented Datastreams. ML (1992)

Lawrence Hunter.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

Lawrence Hunter