Adrien Coulet

ORCID

Publication Activity (10 Years)

Years Active: 2006-2023
Publications (10 Years): 33

Top Venues

Henri Poincaré University, Nancy, France (PHD)

Education History

Henri Poincaré University, Nancy, France

PHD

Publications

Thibaut Fabacher, Erik-André Sauleau, Noémie Leclerc Du Sablon, Hugo Bergier, Jacques-Eric Gottenberg, Adrien Coulet, Aurélie Névéol
Evaluating the Portability of Rheumatoid Arthritis Phenotyping Algorithms: A Case Study on French EHRs. MIE (2023)
Lillian Muyama, Antoine Neuraz, Adrien Coulet
Extracting Diagnosis Pathways from Electronic Health Records Using Deep Reinforcement Learning. CoRR (2023)
Mina Abd Nikooie Pour, Alsayed Algergawy, Patrice Buche, Leyla Jael Castro, Jiaoyan Chen, Adrien Coulet, Julien Cufi, Hang Dong, Omaima Fallatah, Daniel Faria, Irini Fundulaki, Sven Hertling, Yuan He, Ian Horrocks, Martin Huschka, Liliana Ibanescu, Sarika Jain, Ernesto Jiménez-Ruiz, Naouel Karam, Patrick Lambrix, Huanyu Li, Ying Li, Pierre Monnin, Engy Nasr, Heiko Paulheim, Catia Pesquita, Tzanina Saveta, Pavel Shvaiko, Guilherme Sousa, Cássia Trojahn, Jana Vatascinová, Mingfang Wu, Beyza Yaman, Ondrej Zamazal, Lu Zhou
Results of the Ontology Alignment Evaluation Initiative 2023. OM@ISWC (2023)
Antoine Neuraz, Ivan Lerner, Olivier Birot, Camila Arias, Larry Han, Clara-Lea Bonzel, Tianxi Cai, Kim Tâm Huynh, Adrien Coulet
TAXN: Translate Align Extract Normalize, a Multilingual Extraction Tool for Clinical Texts. MedInfo (2023)
Safa Alsaidi, Miguel Couceiro, Esteban Marquer, Sophie Quennelle, Anita Burgun, Nicolas Garcelon, Adrien Coulet
An analogy based framework for patient-stay identification in healthcare. ICCBR Workshops (2022)
Pierre Monnin, Adrien Coulet
Matching pharmacogenomic knowledge: particularities, results, and perspectives. OM@ISWC (2022)
Pierre Monnin, Chedy Raïssi, Amedeo Napoli, Adrien Coulet
Discovering alignment relations with Graph Convolutional Networks: A biomedical case study. Semantic Web 13 (3) (2022)
Safa Alsaidi, Miguel Couceiro, Sophie Quennelle, Anita Burgun, Nicolas Garcelon, Adrien Coulet
Exploring Analogical Inference in Healthcare. IARML@IJCAI (2022)
Joël Legrand, Yannick Toussaint, Chedy Raïssi, Adrien Coulet
Syntax-based transfer learning for the task of biomedical relation extraction. J. Biomed. Semant. 12 (1) (2021)
Emmanuel Bresso, Pierre Monnin, Cédric Bousquet, François-Élie Calvier, Ndeye Coumba Ndiaye, Nadine Petitpain, Malika Smaïl-Tabbone, Adrien Coulet
Investigating ADR mechanisms with Explainable AI: a feasibility study with knowledge graph mining. BMC Medical Informatics Decis. Mak. 21 (1) (2021)
Alice Rogier, Adrien Coulet, Bastien Rance
Using an Ontological Representation of Chemotherapy Toxicities for Guiding Information Extraction and Integration from EHRs. MedInfo (2021)
Walid Hafiane, Joël Legrand, Yannick Toussaint, Adrien Coulet
Expérimentations autour des architectures d'apprentissage par transfert pour l'extraction de relations biomédicales. EGC (2021)
Pierre Monnin, Emmanuel Bresso, Miguel Couceiro, Malika Smaïl-Tabbone, Amedeo Napoli, Adrien Coulet
Tackling scalability issues in mining path patterns from knowledge graphs: a preliminary study. ALGOS (2020)
Pierre Monnin, Miguel Couceiro, Amedeo Napoli, Adrien Coulet
Knowledge-Based Matching of n-ary Tuples. ICCS (2020)
Pierre Monnin, Miguel Couceiro, Amedeo Napoli, Adrien Coulet
Knowledge Reconciliation of n-ary Relations. CoRR (2020)
Pierre Monnin, Emmanuel Bresso, Miguel Couceiro, Malika Smaïl-Tabbone, Amedeo Napoli, Adrien Coulet
Tackling scalability issues in mining path patterns from knowledge graphs: a preliminary study. CoRR (2020)
Emmanuel Bresso, Pierre Monnin, Cédric Bousquet, François-Élie Calvier, Ndeye Coumba Ndiaye, Nadine Petitpain, Malika Smaïl-Tabbone, Adrien Coulet
Investigating ADR mechanisms with knowledge graph mining and explainable AI. CoRR (2020)
Pierre Monnin, Chedy Raïssi, Amedeo Napoli, Adrien Coulet
Rediscovering alignment relations with Graph Convolutional Networks. CoRR (2020)
Walid Hafiane, Joël Legrand, Yannick Toussaint, Adrien Coulet
Experiments on transfer learning architectures for biomedical relation extraction. CoRR (2020)
Stephen Pfohl, Ben J. Marafino, Adrien Coulet, Fátima Rodriguez, Latha Palaniappan, Nigam H. Shah
Creating Fair Models of Atherosclerotic Cardiovascular Disease Risk. AIES (2019)
Pierre Monnin, Joël Legrand, Graziella Husson, Patrice Ringot, Andon Tchechmedjiev, Clément Jonquet, Amedeo Napoli, Adrien Coulet
PGxO and PGxLOD: a reconciliation of pharmacogenomic knowledge of various provenances, enabling further comparison. BMC Bioinform. (4) (2019)
Pierre Monnin, Chedy Raïssi, Amedeo Napoli, Adrien Coulet
Knowledge Reconciliation with Graph Convolutional Networks: Preliminary Results. DL4KG@ESWC (2019)
Joël Legrand, Yannick Toussaint, Chedy Raïssi, Adrien Coulet
Syntax-based Transfer Learning for the Task of Biomedical Relation Extraction. Louhi@EMNLP (2018)
Gabin Personeni, Marie-Dominique Devignes, Malika Smaïl-Tabbone, Philippe Jonveaux, Céline Bonnet, Adrien Coulet
Cooperation of bio-ontologies for the classification of genetic intellectual disabilities : a diseasome approach. SWAT4LS (2018)
Stephen Pfohl, Ben J. Marafino, Adrien Coulet, Fátima Rodriguez, Latha Palaniappan, Nigam H. Shah
Creating Fair Models of Atherosclerotic Cardiovascular Disease Risk. CoRR (2018)
Pierre Monnin, Amedeo Napoli, Adrien Coulet
Combining Concept Annotation and Pattern Structures for Guiding Ontology Mapping. FCA4AI@IJCAI (2018)
Pierre Monnin, Mario Lezoche, Amedeo Napoli, Adrien Coulet
Using Formal Concept Analysis for Checking the Structure of an Ontology in LOD: The Example of DBpedia. ISMIS (2017)
Gabin Personeni, Emmanuel Bresso, Marie-Dominique Devignes, Michel Dumontier, Malika Smaïl-Tabbone, Adrien Coulet
Discovering associations between adverse drug events using pattern structures and ontologies. J. Biomed. Semant. 8 (1) (2017)
Kevin Dalleau, Yassine Marzougui, Sébastien Da Silva, Patrice Ringot, Ndeye Coumba Ndiaye, Adrien Coulet
Learning from biomedical linked data to suggest valid pharmacogenes. J. Biomed. Semant. 8 (1) (2017)
Pierre Monnin, Clément Jonquet, Joël Legrand, Amedeo Napoli, Adrien Coulet
PGxO: A very lite ontology to reconcile pharmacogenomic knowledge units. PeerJ Prepr. 5 (2017)
Adrien Coulet, Malika Smaïl-Tabbone
Mining Electronic Health Records to Validate Knowledge in Pharmacogenomics. ERCIM News 2016 (104) (2016)
Kevin Dalleau, Ndeye Coumba Ndiaye, Adrien Coulet
Suggesting Valid Pharmacogenes by Mining Linked Data. SWAT4LS (2015)
Mohsen Hassan, Olfa Makkaoui, Adrien Coulet, Yannick Toussaint
Extracting Disease-Symptom Relationships by Learning Syntactic Patterns from Dependency Graphs. BioNLP@IJCNLP (2015)
Mohsen Hassan, Adrien Coulet, Yannick Toussaint
Learning Subgraph Patterns from text for Extracting Disease - Symptom Relationships. DMNLP@PKDD/ECML (2014)
Gabin Personeni, Simon Daget, Céline Bonnet, Philippe Jonveaux, Marie-Dominique Devignes, Malika Smaïl-Tabbone, Adrien Coulet
Mining Linked Open Data: A Case Study with Genes Responsible for Intellectual Disability. DILS (2014)
Adrien Coulet, Florent Domenach, Mehdi Kaytoue, Amedeo Napoli
Using Pattern Structures for Analyzing Ontology-Based Annotations of Biomedical Data. ICFCA (2013)
Mehwish Alam, Melisachew Wudage Chekol, Adrien Coulet, Amedeo Napoli, Malika Smaïl-Tabbone
Lattice Based Data Access (LBDA): An Approach for Organizing and Accessing Linked Open Data in Biology. DMoLD (2013)
Yi Liu, Adrien Coulet, Paea LePendu, Nigam H. Shah
Using ontology-based annotation to profile disease research. J. Am. Medical Informatics Assoc. 19 (e1) (2012)
Adrien Coulet, K. Bretonnel Cohen, Russ B. Altman
The state of the art in text mining and natural language processing for pharmacogenomics. J. Biomed. Informatics 45 (5) (2012)
Mehwish Alam, Adrien Coulet, Amedeo Napoli, Malika Smaïl-Tabbone
Formal Concept Analysis Applied to Transcriptomic Data. FCA4AI@ECAI (2012)
Mehwish Alam, Adrien Coulet, Amedeo Napoli, Malika Smaïl-Tabbone
Formal Concept Analysis Applied to Transcriptomic Data. CLA (2012)
Clément Jonquet, Paea LePendu, Sean M. Falconer, Adrien Coulet, Natalya Fridman Noy, Mark A. Musen, Nigam H. Shah
NCBO Resource Index: Ontology-based search and mining of biomedical resources. J. Web Semant. 9 (3) (2011)
Adrien Coulet, Yael Garten, Michel Dumontier, Russ B. Altman, Mark A. Musen, Nigam H. Shah
Integration and publication of heterogeneous text-mined relationships on the Semantic Web. J. Biomed. Semant. 2 (S-2) (2011)
Adrien Coulet, Nigam H. Shah, Yael Garten, Mark A. Musen, Russ B. Altman
Using text to build semantic networks for pharmacogenomics. J. Biomed. Informatics 43 (6) (2010)
Adrien Coulet, Nigam H. Shah, Lawrence Hunter, Chitta Baral, Russ B. Altman
Extraction of Genotype-Phenotype-Drug Relationships from Text: From Entity Recognition to Bioinformatics Application. Pacific Symposium on Biocomputing (2010)
Clément Jonquet, Adrien Coulet, Nigam H. Shah, Mark A. Musen
Indexation et intégration de ressources textuelles à l'aide d'ontologies : application au domaine biomédical. IC (2010)
Adrien Coulet, Malika Smaïl-Tabbone, Amedeo Napoli, Marie-Dominique Devignes
Role Assertion Analysis: a proposed method for ontology refinement through assertion learning. STAIRS (2008)
Adrien Coulet, Malika Smaïl-Tabbone, Amedeo Napoli, Marie-Dominique Devignes
Ontology Refinement through Role Assertion Analysis: Example in Pharmacogenomics. Description Logics (2008)
Adrien Coulet, Malika Smaïl-Tabbone, Pascale Benlian, Amedeo Napoli, Marie-Dominique Devignes
Ontology-guided data preparation for discovering genotype-phenotype relationships. BMC Bioinform. 9 (S-4) (2008)
Adrien Coulet, Malika Smaïl-Tabbone, Amedeo Napoli, Marie-Dominique Devignes
Suggested Ontology for Pharmacogenomics (SO-Pharm): Modular Construction and Preliminary Testing. OTM Workshops (1) (2006)
Adrien Coulet, Malika Smaïl-Tabbone, Pascale Benlian, Amedeo Napoli, Marie-Dominique Devignes
SNP-Converter: An Ontology-Based Solution to Reconcile Heterogeneous SNP Descriptions for Pharmacogenomic Studies. DILS (2006)

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Publication Activity (10 Years)

Top Topics

Top Venues

Adrien Coulet