Barry Zeeberg

Publication Activity (10 Years)

Years Active: 1995-2011
Publications (10 Years): 0

Publications

Barry Zeeberg, Hongfang Liu, Ari B. Kahn, Martin Ehler, Vinodh N. Rajapakse, Robert F. Bonner, Jacob D. Brown, Brian P. Brooks, Vladimir L. Larionov, William C. Reinhold, John N. Weinstein, Yves Pommier
RedundancyMiner: De-replication of redundant GO categories in microarray and proteomics analysis. BMC Bioinform. 12 (2011)
Ari B. Kahn, Barry Zeeberg, Michael C. Ryan, D. Curtis Jamison, David M. Rockoff, Yves Pommier, John N. Weinstein
Ontogenomic study of the relationship between number of gene splice variants and GO categorization. Bioinform. 26 (16) (2010)
Martin Ehler, Vinodh N. Rajapakse, Barry Zeeberg, Brian P. Brooks, Jacob D. Brown, Wojciech Czaja, Robert F. Bonner
Analysis of Temporal-spatial Co-variation within Gene Expression Microarray Data in an Organogenesis Model. ISBRA (2010)
Michael C. Ryan, Barry Zeeberg, Natasha J. Caplen, James A. Cleland, Ari B. Kahn, Hongfang Liu, John N. Weinstein
SpliceCenter: A suite of web-based bioinformatic applications for evaluating the impact of alternative splicing on RT-PCR, RNAi, microarray, and peptide-based studies. BMC Bioinform. 9 (2008)
Hans A. Kestler, André Müller, Johann M. Kraus, Malte Buchholz, Thomas M. Gress, Hongfang Liu, David W. Kane, Barry Zeeberg, John N. Weinstein
VennMaster: Area-proportional Euler diagrams for functional GO analysis of microarrays. BMC Bioinform. 9 (2008)
Ari B. Kahn, Michael C. Ryan, Hongfang Liu, Barry Zeeberg, D. Curtis Jamison, John N. Weinstein
SpliceMiner: a high-throughput database implementation of the NCBI Evidence Viewer for microarray splice variant analysis. BMC Bioinform. 8 (2007)
Hongfang Liu, Barry Zeeberg, Gang Qu, Akif Günes Koru, Alessandro Ferrucci, Ari B. Kahn, Michael C. Ryan, Antej Nuhanovic, Peter J. Munson, William C. Reinhold, David W. Kane, John N. Weinstein
AffyProbeMiner: a web resource for computing or retrieving accurately redefined Affymetrix probe sets. Bioinform. 23 (18) (2007)
Barry Zeeberg, Haiying Qin, Sudarshan Narasimhan, Margot Sunshine, Hong Cao, David W. Kane, Mark Reimers, Robert M. Stephens, David Bryant, Stanley K. Burt, Eldad Elnekave, Danielle M. Hari, Thomas A. Wynn, Charlotte Cunningham-Rundles, Donn M. Stewart, David Nelson, John N. Weinstein
High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variable Immune Deficiency (CVID). BMC Bioinform. 6 (2005)
Barry Zeeberg, Joseph Riss, David W. Kane, Kimberly J. Bussey, Edward Uchio, W. Marston Linehan, J. Carl Barrett, John N. Weinstein
Mistaken Identifiers: Gene name errors can be introduced inadvertently when using Excel in bioinformatics. BMC Bioinform. 5 (2004)
Weimin Feng, Geoffrey Wang, Barry Zeeberg, Kejiao Guo, Anthony T. Fojo, David W. Kane, William C. Reinhold, Samir Lababidi, John N. Weinstein, May D. Wang
Development of Gene Ontology Tool for Biological Interpretation of Genomic and Proteomic Data. AMIA (2003)
Barry Zeeberg, Kevin Watanabe, Susumu Goto, Ross A. Overbeek, Larry Kerschberg, George Michaels
Metabolic Pathway Interface to Molecular Biology Databases. SSDBM (1998)
Lawrence Hunter, Barry Zeeberg
Identifying Chimerism in Proteins Using Hidden Markov Models of Codon Usage. ISMB (1997)
Barry Zeeberg
Theoretical relationships of receptor and delivery sensitivities and measurable parameters in in vivo neuroreceptor-radioligand interactions. IEEE Trans. Medical Imaging 14 (3) (1995)