Shaika Chowdhury

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 15

Top Topics

Quality Estimation

Top Venues

Briefings Bioinform.

Publications

Shaika Chowdhury, Yongbin Chen, Pengyang Li, Sivaraman Rajaganapathy, Andrew Wen, Xiao Ma, Qiying Dai, Yue Yu, Sunyang Fu, Xiaoqian Jiang, Zhe He, Sunghwan Sohn, Xiaoke Liu, Suzette J. Bielinski, Alanna M. Chamberlain, James R. Cerhan, Nansu Zong
Stratifying heart failure patients with graph neural network and transformer using Electronic Health Records to optimize drug response prediction. J. Am. Medical Informatics Assoc. 31 (8) (2024)
Shaika Chowdhury, Sivaraman Rajaganapathy, Lichao Sun, James R. Cerhan, Nansu Zong
Evaluation of GPT-3 for Anti-Cancer Drug Sensitivity Prediction. CoRR (2023)
Shaika Chowdhury, Yongbin Chen, Xiao Ma, Qiying Dai, Yue Yu, Nansu Zong
Evaluating Drug Effectiveness for Antihypertensives in Heart Failure Prognosis: Leveraging Composite Clinical Endpoints and Biomarkers from Electronic Health Records. BCB (2023)
Nansu Zong, Ning Li, Andrew Wen, Victoria Ngo, Yue Yu, Ming Huang, Shaika Chowdhury, Chao Jiang, Sunyang Fu, Richard Weinshilboum, Guoqian Jiang, Lawrence Hunter, Hongfang Liu
BETA: a comprehensive benchmark for computational drug-target prediction. Briefings Bioinform. 23 (4) (2022)
Shaika Chowdhury, Naouel Baili, Brian Vannah
Ensemble Fine-tuned mBERT for Translation Quality Estimation. CoRR (2021)
Shaika Chowdhury, Naouel Baili, Brian Vannah
Ensemble Fine-tuned mBERT for Translation Quality Estimation. WMT@EMNLP (2021)
Shaika Chowdhury, Halid Ziya Yerebakan, Yoshihisa Shinagawa, Philip S. Yu
MedTextSeg: A Deep Dual Sequential Model for Section Segmentation in Medical Reports. IEEE BigData (2021)
Ye Liu, Shaika Chowdhury, Chenwei Zhang, Cornelia Caragea, Philip S. Yu
Interpretable Multi-Step Reasoning with Knowledge Extraction on Complex Healthcare Question Answering. CoRR (2020)
Shaika Chowdhury, Philip S. Yu, Yuan Luo
Improving Medical NLI Using Context-Aware Domain Knowledge. *SEM@COLING (2020)
Shaika Chowdhury, Chenwei Zhang, Philip S. Yu, Yuan Luo
Med2Meta: Learning Representations of Medical Concepts with Meta-embeddings. HEALTHINF (2020)
Shaika Chowdhury, Chenwei Zhang, Philip S. Yu, Yuan Luo
Med2Meta: Learning Representations of Medical Concepts with Meta-Embeddings. CoRR (2019)
Shaika Chowdhury, Chenwei Zhang, Philip S. Yu, Yuan Luo
Hierarchical Semantic Correspondence Learning for Post-Discharge Patient Mortality Prediction. CoRR (2019)
Shaika Chowdhury, Chenwei Zhang, Philip S. Yu, Yuan Luo
Mixed Pooling Multi-View Attention Autoencoder for Representation Learning in Healthcare. CoRR (2019)
Shaika Chowdhury, Chenwei Zhang, Philip S. Yu
Multi-Task Pharmacovigilance Mining from Social Media Posts. WWW (2018)
Shaika Chowdhury, Chenwei Zhang, Philip S. Yu
Multi-Task Pharmacovigilance Mining from Social Media Posts. CoRR (2018)