Aniruddha Datta

ORCID

Publication Activity (10 Years)

Years Active: 1991-2024
Publications (10 Years): 36

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

IEEE J. Biomed. Health Informatics

BCB

BMC Bioinform.

Publications

Aniruddha Datta, Bhanu Vikas Yaganti, Andrew Dove, Arik Peltz, Krishnendu Chakrabarty
Test-Fleet Optimization Using Machine Learning. ETS (2024)
Joshua Shay Kricheli, Khoa Vo, Aniruddha Datta, Spencer Ozgur, Paulo Shakarian
Error Detection and Constraint Recovery in Hierarchical Multi-Label Classification without Prior Knowledge. CoRR (2024)
Shili Wu, Yancheng Zhu, Aniruddha Datta, Sean B. Andersson
Time Optimal Data Harvesting in Two Dimensions through Reinforcement Learning Without Engineered Reward Functions. ACC (2023)
Aditya Lahiri, Haswanth Vundavilli, Madhurima Mondal, Pranabesh Bhattacharjee, Brian Decker, Giuseppe Del Priore, N. Peter Reeves, Aniruddha Datta
Drug Target Identification in Triple Negative Breast Cancer Stem Cell Pathways: A Computational Study of Gene Regulatory Pathways Using Boolean Networks. IEEE Access 11 (2023)
Madhurima Mondal, Aditya Lahiri, Haswanth Vundavilli, Giuseppe Del Priore, Norman Peter Reeves, Aniruddha Datta
Combination Supplements for Endometrial Cancer. BIBE (2023)
Pranabesh Bhattacharjee, Aditya Lahiri, Norman Peter Reeves, Aniruddha Datta
Precision Targeting of Non-Small Cell Lung Cancer: Identifying Optimal Drug Targets and FDA-Approved Combinations for Enhanced Therapeutic Efficacy. BIBE (2023)
Radhika Saraf, Aniruddha Datta, Chao Sima, Jianping Hua, Rosana Lopes, Michael L. Bittner, Tasha Miller, Heather M. Wilson-Robles
In Silico Modeling of the Induction of Apoptosis by Cryptotanshinone in Osteosarcoma Cell Lines. IEEE ACM Trans. Comput. Biol. Bioinform. 19 (3) (2022)
Haswanth Vundavilli, Manuela Tumiati, Sampsa Hautaniemi, Aniruddha Datta, Liisa Kauppi
Image Processing Pipeline to Compute Homologous Recombination Score. ICBET (2022)
Saransh Gupta, Haswanth Vundavilli, Rodolfo S. Allendes Osorio, Mari N. Itoh, Attayeb Mohsen, Aniruddha Datta, Kenji Mizuguchi, Lokesh P. Tripathi
Integrative Network Modeling Highlights the Crucial Roles of Rho-GDI Signaling Pathway in the Progression of non-Small Cell Lung Cancer. IEEE J. Biomed. Health Informatics 26 (9) (2022)
Haswanth Vundavilli, Aniruddha Datta, Chao Sima, Jianping Hua, Rosana Lopes, Michael L. Bittner
In Silico Design and Experimental Validation of Combination Therapy for Pancreatic Cancer. IEEE ACM Trans. Comput. Biol. Bioinform. 17 (3) (2020)
Haswanth Vundavilli, Aniruddha Datta, Chao Sima, Jainping Hua, Rosana Lopes, Michael L. Bittner
Cryptotanshinone Induces Cell Death in Lung Cancer by Targeting Aberrant Feedback Loops. IEEE J. Biomed. Health Informatics 24 (8) (2020)
Mustafa Alshawaqfeh, Ahmad Al Kawam, Erchin Serpedin, Aniruddha Datta
Robust Recurrent CNV Detection in the Presence of Inter-Subject Variability. IEEE ACM Trans. Comput. Biol. Bioinform. 17 (3) (2020)
Rajan Kapoor, Aniruddha Datta, Chao Sima, Jianping Hua, Rosana Lopes, Michael L. Bittner
A Gaussian Mixture-Model Exploiting Pathway Knowledge for Dissecting Cancer Heterogeneity. IEEE ACM Trans. Comput. Biol. Bioinform. 17 (2) (2020)
Haswanth Vundavilli, Aniruddha Datta, Chao Sima, Jianping Hua, Rosana Lopes, Michael L. Bittner
Bayesian Inference Identifies Combination Therapeutic Targets in Breast Cancer. IEEE Trans. Biomed. Eng. 66 (9) (2019)
Arun Sen, Ahmad Al Kawam, Aniruddha Datta
Emergence of DSS efforts in genomics: Past contributions and challenges. Decis. Support Syst. 116 (2019)
Noushin Ghaffari, Osama A. Arshad, Hyundoo Jeong, John Thiltges, Michael F. Criscitiello, Byung-Jun Yoon, Aniruddha Datta, Charles D. Johnson
Examining De Novo Transcriptome Assemblies via a Quality Assessment Pipeline. IEEE ACM Trans. Comput. Biol. Bioinform. 15 (2) (2018)
Ashish Katiyar, Anwoy Kumar Mohanty, Jianping Hua, Chao Sima, Rosana Lopes, Aniruddha Datta, Michael L. Bittner
A Bayesian approach to determine the composition of heterogeneous cancer tissue. BMC Bioinform. (3) (2018)
Ahmad Al Kawam, Arun Sen, Aniruddha Datta, Nancy Dickey
Understanding the Bioinformatics Challenges of Integrating Genomics Into Healthcare. IEEE J. Biomed. Health Informatics 22 (5) (2018)
Ahmad Al Kawam, Sunil P. Khatri, Aniruddha Datta
A GPU-CPU heterogeneous algorithm for NGS read alignment. Int. J. Comput. Biol. Drug Des. 11 (1/2) (2018)
Bijoy K. Ghosh, Aniruddha Datta, Ranadip Pal
Deep Sequencing Data Analysis. IEEE ACM Trans. Comput. Biol. Bioinform. 15 (2) (2018)
Ahmad Al Kawam, Aniruddha Datta
Fast and efficient genotype encoding using sparse 2D bitmaps for database-driven genomics applications. BHI (2018)
Ahmad Al Kawam, Mustafa Alshawaqfeh, James J. Cai, Erchin Serpedin, Aniruddha Datta
Simulating variance heterogeneity in quantitative genome wide association studies. BMC Bioinform. (3) (2018)
Aditya Lahiri, Priyadharshini S. Venkatasubramani, Aniruddha Datta
Bayesian Modeling of Plant Drought Resistance Pathway. BCB (2018)
Ahmad Al Kawam, Mustafa Alshawaqfeh, James J. Cai, Erchin Serpedin, Aniruddha Datta
Simulating Variance Heterogeneity in Quantitative Genome Wide Association Studies. BCB (2017)
Ahmad Al Kawam, Sunil P. Khatri, Aniruddha Datta
A Survey of Software and Hardware Approaches to Performing Read Alignment in Next Generation Sequencing. IEEE ACM Trans. Comput. Biol. Bioinform. 14 (6) (2017)
Pankaj Goel, Aniruddha Datta, M. Sam Mannan
Application of big data analytics in process safety and risk management. IEEE BigData (2017)
Ashish Katiyar, Anwoy Kumar Mohanty, Chao Sima, Jianping Hua, Rosana Lopes, Aniruddha Datta, Michael L. Bittner
A Bayesian Approach to Determine the Composition of Heterogeneous Cancer Tissue. BCB (2017)
Sriram Sridharan, Rajani Varghese, Vijayanagaram Venkatraj, Aniruddha Datta
Hypoxia Stress Response Pathways: Modeling and Targeted Therapy. IEEE J. Biomed. Health Informatics 21 (3) (2017)
Osama A. Arshad, Aniruddha Datta
Towards targeted combinatorial therapy design for the treatment of castration-resistant prostate cancer. BMC Bioinform. 18 (S-4) (2017)
Priya S. Venkat, Krishna R. Narayanan, Aniruddha Datta
A Bayesian Network-Based Approach to Selection of Intervention Points in the Mitogen-Activated Protein Kinase Plant Defense Response Pathway. J. Comput. Biol. 24 (4) (2017)
Chao Sima, Jianping Hua, Rosana Lopes, Aniruddha Datta, Michael L. Bittner
Detecting Cell Growth and Drug Response in Heterogeneous Populations: A Dynamic Imaging Approach. BIBE (2016)
Sofiane Khadraoui, Mohamed Amine Fnaiech, Hazem N. Nounou, Mohamed N. Nounou, Jaroslaw Guzinski, Haitham Abu-Rub, Aniruddha Datta, S. P. Bhattacharyya
Measurement-based control approach for tuning PID controllers: application to induction machines. J. Control. Decis. 3 (3) (2016)
Sofiane Khadraoui, Fouzi Harrou, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta, Shankar P. Bhattacharyya
A measurement-based control design approach for efficient cancer chemotherapy. Inf. Sci. 333 (2016)
Anwoy Kumar Mohanty, Aniruddha Datta, Vijayanagaram Venkatraj
A Conjugate Exponential Model for Cancer Tissue Heterogeneity. IEEE J. Biomed. Health Informatics 20 (2) (2016)
Osama A. Arshad, Priyadharshini S. Venkatasubramani, Aniruddha Datta, Jijayanagaram Venkatraj
Using Boolean Logic Modeling of Gene Regulatory Networks to Exploit the Links Between Cancer and Metabolism for Therapeutic Purposes. IEEE J. Biomed. Health Informatics 20 (1) (2016)
Osama A. Arshad, Aniruddha Datta
Towards targeted combinatorial therapy design for the treatment of castration-resistant prostate cancer. BCB (2016)
Navid Mohsenizadeh, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta, Shankar P. Bhattacharyya
Linear circuits: a measurement-based approach. Int. J. Circuit Theory Appl. 43 (2) (2015)
Majdi Mansouri, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta
State and parameter estimation for nonlinear biological phenomena modeled by S-systems. Digit. Signal Process. 28 (2014)
Noushin Ghaffari, Osama A. Arshad, Hyundoo Jeong, John Thiltges, Michael F. Criscitiello, Byung-Jun Yoon, Aniruddha Datta, Charles D. Johnson
De novo transcriptome assemblies and annotation for pacifie whiteleg shrimp. GlobalSIP (2014)
Sofiane Khadraoui, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta
A data-based approach for designing adaptive controllers for unknown systems. ISCCSP (2014)
Anwoy Kumar Mohanty, Aniruddha Datta, Vijayanagaram Venkatraj
A Model for Cancer Tissue Heterogeneity. IEEE Trans. Biomed. Eng. 61 (3) (2014)
Daniel N. Mohsenizadeh, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta
A new measurement based approach to the study of biological systems. ISCCSP (2014)
Anwoy Kumar Mohanty, Aniruddha Datta, Vijayanagaram Venkatraj
Using the message passing algorithm on discrete data to detect faults in boolean regulatory networks. Algorithms Mol. Biol. 9 (2014)
Sofiane Khadraoui, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta, Shankar P. Bhattacharyya
A model-free design of reduced-order controllers and application to a DC servomotor. Autom. 50 (8) (2014)
Sofiane Khadraoui, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta, Shankar P. Bhattacharyya
A measurement-based approach for tuning of reduced-order controllers. ACC (2013)
Mohammadmahdi R. Yousefi, Aniruddha Datta, Edward R. Dougherty
Optimal Intervention in Markovian Gene Regulatory Networks With Random-Length Therapeutic Response to Antitumor Drug. IEEE Trans. Biomed. Eng. 60 (12) (2013)
Navid Mohsenizadeh, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta, Shankar P. Bhattacharyya
A measurement based approach to mechanical systems. ASCC (2013)
Sofiane Khadraoui, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta, Shankar P. Bhattacharyya
A control design method for unknown systems using frequency domain data. ASCC (2013)
Anwoy Kumar Mohanty, Aniruddha Datta, Jijayanagaram Venkatraj
On the modeling of heterogeneity in cancer tissue. GlobalSIP (2013)
Sriram Sridharan, Aniruddha Datta, Jijayanagaram Venkatraj
Boolean model to experimental validation: A preliminary attempt. GENSiPS (2013)
Rajani Varghese, Sriram Sridharan, Aniruddha Datta, Jijayanagaram Venkatraj
Modeling hypoxia stress response pathways. GENSiPS (2013)
Sofiane Khadraoui, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta, Shankar P. Bhattacharyya
Robust control design method for uncertain system using a set of measurements. ACC (2013)
Sofiane Khadraoui, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta, Shankar P. Bhattacharyya
Design of reduced-order controllers using a set of measurements: Application to a DC servomotor. ACC (2013)
Sofiane Khadraoui, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta, Shankar P. Bhattacharyya
A model-free technique for designing fixed-order controllers. CDC (2013)
Nader Meskin, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta
Parameter Estimation of Biological Phenomena: An Unscented Kalman Filter Approach. IEEE ACM Trans. Comput. Biol. Bioinform. 10 (2) (2013)
Sofiane Khadraoui, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta, Shankar P. Bhattacharyya
A measurement-based approach for designing reduced-order controllers with guaranteed bounded error. Int. J. Control 86 (9) (2013)
Anwoy Kumar Mohanty, Aniruddha Datta, Jijayanagaram Venkatraj
On the modeling of heterogeneity in cancer tissue. GENSiPS (2013)
Osama A. Arshad, Priyadharshini S. Venkatasubramami, Aniruddha Datta, Jijayanagaram Venkatraj
Exploiting the cancer and diabetes metabolic connection for therapeutic purposes. GENSiPS (2013)
Mohamed N. Nounou, Hazem N. Nounou, Erchin Serpedin, Aniruddha Datta, Yufei Huang
Computational and Statistical Approaches for Modeling of Proteomic and Genomic Networks. Adv. Bioinformatics 2013 (2013)
Bin He, Richard Baird, Robert J. Butera, Aniruddha Datta, Steven George, Bruce Hecht, Alfred O. Hero III, Gianluca Lazzi, Raphael C. Lee, Jie Liang, Michael R. Neuman, Grace C. Y. Peng, Eric J. Perreault, Melur Ramasubramanian, May D. Wang, John P. Wikswo, Guang-Zhong Yang, Yuan-Ting Zhang
Grand Challenges in Interfacing Engineering With Life Sciences and Medicine. IEEE Trans. Biomed. Eng. 60 (3) (2013)
Mohamed Amine Fnaiech, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta
Intervention in Biological Phenomena via Feedback Linearization. Adv. Bioinformatics 2012 (2012)
Anwoy Kumar Mohanty, Aniruddha Datta, Jijayanagaram Venkatraj
Determining the relative prevalence of different subpopulations in heterogeneous cancer tissue. GENSiPS (2012)
Mohammadmahdi R. Yousefi, Aniruddha Datta, Edward R. Dougherty
Optimal therapeutic methods with random-length response in probabilistic boolean networks. GENSiPS (2012)
Nader Meskin, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta, Edward R. Dougherty
Output-feedback model predictive control of biological phenomena modeled by S-systems. ACC (2012)
Mohammadmahdi R. Yousefi, Aniruddha Datta, Edward R. Dougherty
Optimal Intervention Strategies for Therapeutic Methods With Fixed-Length Duration of Drug Effectiveness. IEEE Trans. Signal Process. 60 (9) (2012)
Mohammadmahdi R. Yousefi, Aniruddha Datta, Edward R. Dougherty
Optimal cancer therapy based on a tumor growth inhibition model. SSP (2012)
Jason M. Knight, Aniruddha Datta, Edward R. Dougherty
Generating Stochastic Gene Regulatory Networks Consistent With Pathway Information and Steady-State Behavior. IEEE Trans. Biomed. Eng. 59 (6) (2012)
Hazem N. Nounou, Mohamed N. Nounou, Nader Meskin, Aniruddha Datta, Edward R. Dougherty
Fuzzy Intervention in Biological Phenomena. IEEE ACM Trans. Comput. Biol. Bioinform. 9 (6) (2012)
Mohamed N. Nounou, Hazem N. Nounou, Nader Meskin, Aniruddha Datta, Edward R. Dougherty
Multiscale Denoising of Biological Data: A Comparative Analysis. IEEE ACM Trans. Comput. Biol. Bioinform. 9 (5) (2012)
Mohamed N. Nounou, Hazem N. Nounou, Nader Meskin, Aniruddha Datta
Wavelet-based Multiscale Filtering of Genomic Data. ASONAM (2012)
Ritwik Layek, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta, Shankar P. Bhattacharyya
A measurement based approach for linear circuit modeling and design. CDC (2012)
Sriram Sridharan, Ritwik Layek, Aniruddha Datta, Jijayanagaram Venkatraj
Boolean network model of oxidative stress response pathways. ACC (2012)
Nader Meskin, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta, Edward R. Dougherty
Intervention in Biological Phenomena Modeled by S-Systems. IEEE Trans. Biomed. Eng. 58 (5) (2011)
Sriram Sridharan, Ritwik Layek, Aniruddha Datta, Jijayanagaram Venkatraj
Modelling oxidative stress response pathways. GENSiPS (2011)
Nader Meskin, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta, Edward R. Dougherty
Parameter estimation of biological phenomena modeled by S-systems: An Extended Kalman filter approach. CDC/ECC (2011)
Nader Meskin, Hazem N. Nounou, Mohamed N. Nounou, Aniruddha Datta, Edward R. Dougherty
Intervention in biological phenomena modeled by S-systems: A model predictive control approach. ACC (2011)
Ritwik Layek, Aniruddha Datta, Michael L. Bittner, Edward R. Dougherty
Combination therapy design for cancer: A digital systems approach. CDC/ECC (2011)
Ritwik Layek, Aniruddha Datta, Michael L. Bittner, Edward R. Dougherty
Cancer therapy design based on pathway logic. Bioinform. 27 (4) (2011)
Mohammadmahdi R. Yousefi, Aniruddha Datta, Edward R. Dougherty
Modeling cyclic and acyclic therapeutic methods with persistent intervention effect in probabilistic Boolean networks. GENSiPS (2011)
Mohammadmahdi R. Yousefi, Aniruddha Datta, Edward R. Dougherty
Optimal intervention strategies for cyclic therapeutic methods with fixed-length duration of effect. ACSCC (2011)
Ritwik Layek, Aniruddha Datta, Shankar P. Bhattacharyya
Linear circuits: A measurement based approach. ECCTD (2011)
Edward R. Dougherty, Ranadip Pal, Xiaoning Qian, Michael L. Bittner, Aniruddha Datta
Stationary and structural control in gene regulatory networks: basic concepts. Int. J. Syst. Sci. 41 (1) (2010)
Ritwik Layek, Aniruddha Datta, Edward R. Dougherty
From biological pathways to regulatory networks. CDC (2010)
Ritwik Layek, Aniruddha Datta, Ranadip Pal, Edward R. Dougherty
Adaptive intervention in Probabilistic Boolean Networks. ACC (2009)
Ranadip Pal, Aniruddha Datta, Edward R. Dougherty
Quantification of data extraction noise in probabilistic Boolean Network modeling. GENSiPS (2009)
Ranadip Pal, Aniruddha Datta, Edward R. Dougherty
Bayesian robustness in the control of gene regulatory networks. IEEE Trans. Signal Process. 57 (9) (2009)
Babak Faryabi, Golnaz Vahedi, Jean-François Chamberland, Aniruddha Datta, Edward R. Dougherty
Intervention in Context-Sensitive Probabilistic Boolean Networks Revisited. EURASIP J. Bioinform. Syst. Biol. 2009 (2009)
Golnaz Vahedi, Babak Faryabi, Jean-François Chamberland, Aniruddha Datta, Edward R. Dougherty
Optimal Intervention Strategies for Cyclic Therapeutic Methods. IEEE Trans. Biomed. Eng. 56 (2) (2009)
Ritwik Layek, Aniruddha Datta, Ranadip Pal, Edward R. Dougherty
Adaptive intervention in probabilistic boolean networks. Bioinform. 25 (16) (2009)
Babak Faryabi, Golnaz Vahedi, Jean-François Chamberland, Aniruddha Datta, Edward R. Dougherty
Open-Loop Feedback Intervention: Control of gene regulatory networks with unmeasurable context. GENSiPS (2009)
Babak Faryabi, Golnaz Vahedi, Jean-François Chamberland, Aniruddha Datta, Edward R. Dougherty
Optimal Constrained Stationary Intervention in Gene Regulatory Networks. EURASIP J. Bioinform. Syst. Biol. 2008 (2008)
Golnaz Vahedi, Babak Faryabi, Jean-François Chamberland, Aniruddha Datta, Edward R. Dougherty
Intervention in Gene Regulatory Networks via a Stationary Mean-First-Passage-Time Control Policy. IEEE Trans. Biomed. Eng. 55 (10) (2008)
Babak Faryabi, Jean-François Chamberland, Golnaz Vahedi, Aniruddha Datta, Edward R. Dougherty
Optimal intervention in semi-Markov-based asynchronous genetic regulatory networks. ACC (2008)
Golnaz Vahedi, Babak Faryabi, Jean-François Chamberland, Aniruddha Datta, Edward R. Dougherty
Mean first-passage time control policy versus reinforcement-learning control policy in gene regulatory networks. ACC (2008)
Ranadip Pal, Aniruddha Datta, Edward R. Dougherty
Robust Intervention in Probabilistic Boolean Networks. IEEE Trans. Signal Process. 56 (3) (2008)
Babak Faryabi, Jean-François Chamberland, Golnaz Vahedi, Aniruddha Datta, Edward R. Dougherty
Optimal Intervention in Asynchronous Genetic Regulatory Networks. IEEE J. Sel. Top. Signal Process. 2 (3) (2008)
Ranadip Pal, Aniruddha Datta, Edward R. Dougherty
Robust Intervention in Probabilistic Boolean Networks. ACC (2007)
Ashish Choudhary, Aniruddha Datta, Michael L. Bittner, Edward R. Dougherty
Intervention in a family of Boolean networks. Bioinform. 22 (2) (2006)
Ranadip Pal, Aniruddha Datta, Edward R. Dougherty
Optimal infinite-horizon control for probabilistic Boolean networks. IEEE Trans. Signal Process. 54 (6-2) (2006)
Ranadip Pal, Aniruddha Datta, Edward R. Dougherty
Optimal infinite horizon control for probabilistic Boolean networks. ACC (2006)

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Publication Activity (10 Years)

Top Topics

Top Venues

Aniruddha Datta