Mohammadmahdi R. Yousefi

Publication Activity (10 Years)

Years Active: 2010-2016
Publications (10 Years): 2

Top Topics

Processing Pipeline

Bayesian Classification

Gene Expression

Optimal Control

Top Venues

EURASIP J. Bioinform. Syst. Biol.

Publications

He Zhou, Jiang Hu, Sunil P. Khatri, Frank Liu, Cliff C. N. Sze, Mohammadmahdi R. Yousefi
GPU acceleration for Bayesian control of Markovian genetic regulatory networks. BHI (2016)
Mohammadmahdi R. Yousefi, Lori A. Dalton
On the limits of data-driven cancer prognosis prediction. BHI (2016)
Lori A. Dalton, Mohammadmahdi R. Yousefi
On optimal Bayesian classification and risk estimation under multiple classes. EURASIP J. Bioinform. Syst. Biol. 2015 (2015)
Mohammadmahdi R. Yousefi, Lori A. Dalton
Optimal cancer prognosis under network uncertainty. EURASIP J. Bioinform. Syst. Biol. 2015 (2015)
Mohammadmahdi R. Yousefi, Lori A. Dalton
Optimal cancer prognosis under network uncertainty. BCB (2014)
Mohammadmahdi R. Yousefi, Edward R. Dougherty
A comparison study of optimal and suboptimal intervention policies for gene regulatory networks in the presence of uncertainty. EURASIP J. Bioinform. Syst. Biol. 2014 (2014)
Lori A. Dalton, Mohammadmahdi R. Yousefi
Optimal Bayesian cancer prognosis with model-constrained robust intervention. GlobalSIP (2014)
Mohammadmahdi R. Yousefi
Compromised intervention policies for phenotype alteration. GENSiPS (2013)
Mohammadmahdi R. Yousefi, Aniruddha Datta, Edward R. Dougherty
Optimal Intervention in Markovian Gene Regulatory Networks With Random-Length Therapeutic Response to Antitumor Drug. IEEE Trans. Biomed. Eng. 60 (12) (2013)
Noushin Ghaffari, Mohammadmahdi R. Yousefi, Charles D. Johnson, Ivan Ivanov, Edward R. Dougherty
Modeling the Next Generation Sequencing sample processing pipeline for the purposes of classification. BMC Bioinform. 14 (2013)
Mohammadmahdi R. Yousefi, Ivan Ivanov
Optimal control of gene regulatory networks with uncertain intervention effects. GlobalSIP (2013)
Mohammadmahdi R. Yousefi, Edward R. Dougherty
Bayesian optimal control of Markovian genetic regulatory networks. ACSSC (2013)
Mohammadmahdi R. Yousefi, Edward R. Dougherty
Intervention in gene regulatory networks with maximal phenotype alteration. Bioinform. 29 (14) (2013)
Mohammadmahdi R. Yousefi, Aniruddha Datta, Edward R. Dougherty
Optimal therapeutic methods with random-length response in probabilistic boolean networks. GENSiPS (2012)
Mohammadmahdi R. Yousefi, Aniruddha Datta, Edward R. Dougherty
Optimal Intervention Strategies for Therapeutic Methods With Fixed-Length Duration of Drug Effectiveness. IEEE Trans. Signal Process. 60 (9) (2012)
Mohammadmahdi R. Yousefi, Aniruddha Datta, Edward R. Dougherty
Optimal cancer therapy based on a tumor growth inhibition model. SSP (2012)
Mohammadmahdi R. Yousefi, Edward R. Dougherty
Performance reproducibility index for classification. Bioinform. 28 (21) (2012)
Mohammadmahdi R. Yousefi, Jianping Hua, Edward R. Dougherty
Multiple-rule bias in the comparison of classification rules. Bioinform. 27 (12) (2011)
Mohammadmahdi R. Yousefi, Aniruddha Datta, Edward R. Dougherty
Modeling cyclic and acyclic therapeutic methods with persistent intervention effect in probabilistic Boolean networks. GENSiPS (2011)
Mohammadmahdi R. Yousefi, Aniruddha Datta, Edward R. Dougherty
Optimal intervention strategies for cyclic therapeutic methods with fixed-length duration of effect. ACSCC (2011)
Mohammadmahdi R. Yousefi, Jianping Hua, Chao Sima, Edward R. Dougherty
Reporting bias when using real data sets to analyze classification performance. Bioinform. 26 (1) (2010)
Mohammadmahdi R. Yousefi, Jianping Hua, Chao Sima, Edward R. Dougherty
Effects of partial reporting of classification results. GENSiPS (2010)