Janet Kelso

Publication Activity (10 Years)

Years Active: 2005-2020
Publications (10 Years): 6

Top Topics

Differential Expression

User Involvement

Statistical Tests

Wikipedia Pages

Top Venues

PLoS Comput. Biol.

Publications

Matthew Waas, Shana T. Snarrenberg, Jack Littrell, Rachel A. Jones Lipinski, Polly A. Hansen, John A. Corbett, Rebekah L. Gundry, Janet Kelso
SurfaceGenie: a web-based application for prioritizing cell-type-specific marker candidates. Bioinform. 36 (11) (2020)
Matteo Ciciani, Thomas Cantore, Mario Lauria, Janet Kelso
rScudo: an R package for classification of molecular profiles using rank-based signatures. Bioinform. 36 (13) (2020)
Zhong Wang, Nating Wang, Zilu Wang, Libo Jiang, Yaqun Wang, Jiahan Li, Rongling Wu, Janet Kelso
HiGwas: how to compute longitudinal GWAS data in population designs. Bioinform. 36 (14) (2020)
Jonathan D. Wren, Alfonso Valencia, Janet Kelso
Reviewer-coerced citation: case report, update on journal policy and suggestions for future prevention. Bioinform. 35 (18) (2019)
Martin Petr, Benjamin Vernot, Janet Kelso
admixr - R package for reproducible analyses using ADMIXTOOLS. Bioinform. 35 (17) (2019)
Steffi Grote, Kay Prüfer, Janet Kelso, Michael Dannemann
ABAEnrichment: an R package to test for gene set expression enrichment in the adult and developing human brain. Bioinform. 32 (20) (2016)
Gabriel Renaud, Udo Stenzel, Tomislav Maricic, Victor Wiebe, Janet Kelso
deML: robust demultiplexing of Illumina sequences using a likelihood-based approach. Bioinform. 31 (5) (2015)
Alex Bateman, Janet Kelso, Daniel Mietchen, Geoff MacIntyre, Tomás Di Domenico, Thomas Abeel, Darren W. Logan, Predrag Radivojac, Burkhard Rost
ISCB Computational Biology Wikipedia Competition. PLoS Comput. Biol. 9 (9) (2013)
Gabriel Renaud, Martin Kircher, Udo Stenzel, Janet Kelso
freeIbis: an efficient basecaller with calibrated quality scores for Illumina sequencers. Bioinform. 29 (9) (2013)
Burkhard Rost, Terry Gaasterland, Thomas Lengauer, Michal Linial, Scott Markel, B. J. Morrison McKay, Reinhard Schneider, Paul Horton, Janet Kelso
Paving the future: finding suitable ISMB venues. Bioinform. 28 (19) (2012)
Anika Groß, Michael Hartung, Kay Prüfer, Janet Kelso, Erhard Rahm
Impact of ontology evolution on functional analyses. Bioinform. 28 (20) (2012)
Shoba Ranganathan, Christian Schönbach, Janet Kelso, Burkhard Rost, Sheila Nathan, Tin Wee Tan
Towards big data science in the decade ahead from ten years of InCoB and the 1st ISCB-Asia Joint Conference. BMC Bioinform. 12 (S-13) (2011)
Pascale Gaudet, Amos Bairoch, Dawn Field, Susanna-Assunta Sansone, Chris F. Taylor, Teresa K. Attwood, Alex Bateman, Judith A. Blake, Carol J. Bult, J. Michael Cherry, Rex L. Chisholm, Guy Cochrane, Charles E. Cook, Janan T. Eppig, Michael Y. Galperin, Robert Gentleman, Carole A. Goble, Takashi Gojobori, John M. Hancock, Douglas G. Howe, Tadashi Imanishi, Janet Kelso, David Landsman, Suzanna E. Lewis, Ilene Karsch-Mizrachi, Sandra E. Orchard, B. F. Francis Ouellette, Shoba Ranganathan, Lorna J. Richardson, Philippe Rocca-Serra, Paul N. Schofield, Damian Smedley, Christopher Southan, Tin Wee Tan, Tatiana A. Tatusova, Patricia L. Whetzel, Owen White, Chisato Yamasaki
Towards BioDBcore: a community-defined information specification for biological databases. Database J. Biol. Databases Curation 2011 (2011)
Heinrich Herre, Robert Hoehndorf, Janet Kelso, Frank Loebe, Stefan Schulz
OBML - Ontologies in Biomedicine and Life Sciences. J. Biomed. Semant. 2 (S-4) (2011)
Pascale Gaudet, Amos Bairoch, Dawn Field, Susanna-Assunta Sansone, Chris F. Taylor, Teresa K. Attwood, Alex Bateman, Judith A. Blake, Carol J. Bult, J. Michael Cherry, Rex L. Chisholm, Guy Cochrane, Charles E. Cook, Janan T. Eppig, Michael Y. Galperin, Robert Gentleman, Carole A. Goble, Takashi Gojobori, John M. Hancock, Douglas G. Howe, Tadashi Imanishi, Janet Kelso, David Landsman, Suzanna E. Lewis, Ilene Karsch-Mizrachi, Sandra E. Orchard, B. F. Francis Ouellette, Shoba Ranganathan, Lorna J. Richardson, Philippe Rocca-Serra, Paul N. Schofield, Damian Smedley, Christopher Southan, Tin Wee Tan, Tatiana A. Tatusova, Patricia L. Whetzel, Owen White, Chisato Yamasaki
Towards BioDBcore: a community-defined information specification for biological databases. Nucleic Acids Res. 39 (Database-Issue) (2011)
Robert Hoehndorf, Anika Oellrich, Michel Dumontier, Janet Kelso, Dietrich Rebholz-Schuhmann, Heinrich Herre
Relations as patterns: bridging the gap between OBO and OWL. BMC Bioinform. 11 (2010)
Robert Hoehndorf, Axel-Cyrille Ngonga Ngomo, Janet Kelso
Applying the functional abnormality ontology pattern to anatomical functions. J. Biomed. Semant. 1 (2010)
Robert Hoehndorf, Janet Kelso, Heinrich Herre
The ontology of biological sequences. BMC Bioinform. 10 (2009)
Robert Hoehndorf, Joshua Bacher, Michael Backhaus, Sergio E. Gregorio Jr., Frank Loebe, Kay Prüfer, Alexandr Uciteli, Johann Visagie, Heinrich Herre, Janet Kelso
BOWiki: an ontology-based wiki for annotation of data and integration of knowledge in biology. BMC Bioinform. 10 (S-5) (2009)
David Landsman, Robert Gentleman, Janet Kelso, B. F. Francis Ouellette
: A new forum for biological databases and curation. Database J. Biol. Databases Curation 2009 (2009)
Joshua Bacher, Robert Hoehndorf, Janet Kelso
BOWiki: Ontology-based Semantic Wiki with ABox Reasoning. SemWiki (2008)
Robert Hoehndorf, Frank Loebe, Roberto Poli, Heinrich Herre, Janet Kelso
GFO-Bio: A biological core ontology. Appl. Ontology 3 (4) (2008)
Kay Prüfer, Udo Stenzel, Michael Dannemann, Richard E. Green, Michael Lachmann, Janet Kelso
PatMaN: rapid alignment of short sequences to large databases. Bioinform. 24 (13) (2008)
Robert Hoehndorf, Frank Loebe, Janet Kelso, Heinrich Herre
Representing default knowledge in biomedical ontologies: application to the integration of anatomy and phenotype ontologies. BMC Bioinform. 8 (2007)
Michael Backhaus, Janet Kelso, Joshua Bacher, Heinrich Herre, Robert Hoehndorf, Frank Loebe, Johann Visagie
BOWiki - a Collaborative Annotation and Ontology Curation Framework. CKC (2007)
Robert Hoehndorf, Kay Prüfer, Michael Backhaus, Heinrich Herre, Janet Kelso, Frank Loebe, Johann Visagie
A Proposal for a Gene Functions Wiki. OTM Workshops (1) (2006)
Patryk Burek, Robert Hoehndorf, Frank Loebe, Johann Visagie, Heinrich Herre, Janet Kelso
A top-level ontology of functions and its application in the Open Biomedical Ontologies. ISMB (Supplement of Bioinformatics) (2006)
Motohiko Tanino, Marie-Anne Debily, Takuro Tamura, Teruyoshi Hishiki, Osamu Ogasawara, Katsuji Murakawa, Shoko Kawamoto, Kouichi Itoh, Shinya Watanabe, Sandro José de Souza, Sandrine Imbeaud, Esther Graudens, Eric Eveno, Phillip Hilton, Yukio Sudo, Janet Kelso, Kazuho Ikeo, Tadashi Imanishi, Takashi Gojobori, Charles Auffray, Winston Hide, Kousaku Okubo
The Human Anatomic Gene Expression Library (H-ANGEL), the H-Inv integrative display of human gene expression across disparate technologies and platforms. Nucleic Acids Res. 33 (Database-Issue) (2005)