Kousaku Okubo

Publication Activity (10 Years)

Years Active: 1999-2018
Publications (10 Years): 3

Top Topics

Genotype Phenotype

Automatic Image Annotation

Functional Genomics

Top Venues

Nucleic Acids Res.

Publications

Yuichi Kodama, Jun Mashima, Takehide Kosuge, Eli Kaminuma, Osamu Ogasawara, Kousaku Okubo, Yasukazu Nakamura, Toshihisa Takagi
DNA Data Bank of Japan: 30th anniversary. Nucleic Acids Res. 46 (Database-Issue) (2018)
Jun Mashima, Yuichi Kodama, Takatomo Fujisawa, Toshiaki Katayama, Yoshihiro Okuda, Eli Kaminuma, Osamu Ogasawara, Kousaku Okubo, Yasukazu Nakamura, Toshihisa Takagi
DNA Data Bank of Japan. Nucleic Acids Res. 45 (Database-Issue) (2017)
Jun Mashima, Yuichi Kodama, Takehide Kosuge, Takatomo Fujisawa, Toshiaki Katayama, Hideki Nagasaki, Yoshihiro Okuda, Eli Kaminuma, Osamu Ogasawara, Kousaku Okubo, Yasukazu Nakamura, Toshihisa Takagi
DNA data bank of Japan (DDBJ) progress report. Nucleic Acids Res. 44 (Database-Issue) (2016)
Yuichi Kodama, Jun Mashima, Takehide Kosuge, Toshiaki Katayama, Takatomo Fujisawa, Eli Kaminuma, Osamu Ogasawara, Kousaku Okubo, Toshihisa Takagi, Yasukazu Nakamura
The DDBJ Japanese Genotype-phenotype Archive for genetic and phenotypic human data. Nucleic Acids Res. 43 (Database-Issue) (2015)
Kazuo Hara, Ikumi Suzuki, Kousaku Okubo, Isamu Muto
Annotating Cohesive Statements of Anatomical Knowledge Toward Semi-automated Information Extraction. KDIR (2014)
Takehide Kosuge, Jun Mashima, Yuichi Kodama, Takatomo Fujisawa, Eli Kaminuma, Osamu Ogasawara, Kousaku Okubo, Toshihisa Takagi, Yasukazu Nakamura
DDBJ progress report: a new submission system for leading to a correct annotation. Nucleic Acids Res. 42 (Database-Issue) (2014)
Osamu Ogasawara, Jun Mashima, Yuichi Kodama, Eli Kaminuma, Yasukazu Nakamura, Kousaku Okubo, Toshihisa Takagi
DDBJ new system and service refactoring. Nucleic Acids Res. 41 (Database-Issue) (2013)
Yuichi Kodama, Jun Mashima, Eli Kaminuma, Takashi Gojobori, Osamu Ogasawara, Toshihisa Takagi, Kousaku Okubo, Yasukazu Nakamura
The DNA Data Bank of Japan launches a new resource, the DDBJ Omics Archive of functional genomics experiments. Nucleic Acids Res. 40 (Database-Issue) (2012)
Eli Kaminuma, Takehide Kosuge, Yuichi Kodama, Hideo Aono, Jun Mashima, Takashi Gojobori, Hideaki Sugawara, Osamu Ogasawara, Toshihisa Takagi, Kousaku Okubo, Yasukazu Nakamura
DDBJ progress report. Nucleic Acids Res. 39 (Database-Issue) (2011)
Eli Kaminuma, Jun Mashima, Yuichi Kodama, Takashi Gojobori, Osamu Ogasawara, Kousaku Okubo, Toshihisa Takagi, Yasukazu Nakamura
DDBJ launches a new archive database with analytical tools for next-generation sequence data. Nucleic Acids Res. 38 (Database-Issue) (2010)
Nobutaka Mitsuhashi, Kaori Fujieda, Takuro Tamura, Shoko Kawamoto, Toshihisa Takagi, Kousaku Okubo
BodyParts3D: 3D structure database for anatomical concepts. Nucleic Acids Res. 37 (Database-Issue) (2009)
Teruyoshi Hishiki, Issei Tamada, Kousaku Okubo
Gene-L'EXPO: a Tool to Extract Knowledge From Transcriptomes and Find 'Literature-Sparse' Relationships Between Genes and Tissues. AMIA (2008)
Hideaki Sugawara, Osamu Ogasawara, Kousaku Okubo, Takashi Gojobori, Yoshio Tateno
DDBJ with new system and face. Nucleic Acids Res. 36 (Database-Issue) (2008)
Kousaku Okubo, Hideaki Sugawara, Takashi Gojobori, Yoshio Tateno
DDBJ in preparation for overview of research activities behind data submissions. Nucleic Acids Res. 34 (Database-Issue) (2006)
Osamu Ogasawara, Makiko Otsuji, Kouji Watanabe, Takayasu Iizuka, Takuro Tamura, Teruyoshi Hishiki, Shoko Kawamoto, Kousaku Okubo
BodyMap-Xs: anatomical breakdown of 17 million animal ESTs for cross-species comparison of gene expression. Nucleic Acids Res. 34 (Database-Issue) (2006)
Yoshio Tateno, Naruya Saitou, Kousaku Okubo, Hideaki Sugawara, Takashi Gojobori
DDBJ in collaboration with mass-sequencing teams on annotation. Nucleic Acids Res. 33 (Database-Issue) (2005)
Motohiko Tanino, Marie-Anne Debily, Takuro Tamura, Teruyoshi Hishiki, Osamu Ogasawara, Katsuji Murakawa, Shoko Kawamoto, Kouichi Itoh, Shinya Watanabe, Sandro José de Souza, Sandrine Imbeaud, Esther Graudens, Eric Eveno, Phillip Hilton, Yukio Sudo, Janet Kelso, Kazuho Ikeo, Tadashi Imanishi, Takashi Gojobori, Charles Auffray, Winston Hide, Kousaku Okubo
The Human Anatomic Gene Expression Library (H-ANGEL), the H-Inv integrative display of human gene expression across disparate technologies and platforms. Nucleic Acids Res. 33 (Database-Issue) (2005)
Teruyoshi Hishiki, Osamu Ogasawara, Yoshimasa Tsuruoka, Kousaku Okubo
Indexing anatomical concepts to OMIM Clinical Synopsis using UMLS Metathesaurus. Silico Biol. 4 (1) (2003)
Jun Sese, Hitoshi Nikaidou, Shoko Kawamoto, Yuichi Minesaki, Shinichi Morishita, Kousaku Okubo
BodyMap incorporated PCR-based expression profiling data and a gene ranking system. Nucleic Acids Res. 29 (1) (2001)
Teruyoshi Hishiki, Shoko Kawamoto, Shinichi Morishita, Kousaku Okubo
BodyMap: a human and mouse gene expression database. Nucleic Acids Res. 28 (1) (2000)
Shinichi Morishita, Teruyoshi Hishiki, Kousaku Okubo
Towards Mining Gene Expression Database. 1999 ACM SIGMOD Workshop on Research Issues in Data Mining and Knowledge Discovery (1999)