Piero Fariselli

ORCID

Publication Activity (10 Years)

Years Active: 1995-2024
Publications (10 Years): 36

Top Venues

Publications

Giovanni Birolo, Pietro Bosoni, Guglielmo Faggioli, Helena Aidos, Roberto Bergamaschi, Paola Cavalla, Adriano Chiò, Arianna Dagliati, Mamede de Carvalho, Giorgio Maria Di Nunzio, Piero Fariselli, Jose Manuel García Dominguez, Marta Gromicho, Alessandro Guazzo, Enrico Longato, Sara C. Madeira, Umberto Manera, Stefano Marchesin, Laura Menotti, Gianmaria Silvello, Eleonora Tavazzi, Erica Tavazzi, Isotta Trescato, Martina Vettoretti, Barbara Di Camillo, Nicola Ferro
Overview of iDPP@CLEF 2024: The Intelligent Disease Progression Prediction Challenge. CLEF (Working Notes) (2024)
Guido Barducci, Flavio Sartori, Giovanni Birolo, Tiziana Sanavia, Piero Fariselli
ALSFRS-R Score Prediction for Amyotrophic Lateral Sclerosis. CLEF (Working Notes) (2024)
Moreno Marzolla, Giovanni Birolo, Gabriele D'Angelo, Piero Fariselli
Parallel intersection counting on shared-memory multiprocessors and GPUs. Future Gener. Comput. Syst. 159 (2024)
Cesare Rollo, Corrado Pancotti, Giovanni Birolo, Ivan Rossi, Tiziana Sanavia, Piero Fariselli
SYNDSURV: A simple framework for survival analysis with data distributed across multiple institutions. Comput. Biol. Medicine 172 (2024)
Helena Aidos, Roberto Bergamaschi, Paola Cavalla, Adriano Chiò, Arianna Dagliati, Barbara Di Camillo, Mamede de Carvalho, Nicola Ferro, Piero Fariselli, Jose Manuel García Dominguez, Sara C. Madeira, Eleonora Tavazzi
iDPP@CLEF 2024: The Intelligent Disease Progression Prediction Challenge. ECIR (6) (2024)
Ivan Rossi, Giovanni Birolo, Piero Fariselli
Multiple Sclerosis Survival Prediction Results from DSM-COMPBIO UNITO. CLEF (Working Notes) (2023)
Helena Aidos, Roberto Bergamaschi, Paola Cavalla, Adriano Chiò, Arianna Dagliati, Barbara Di Camillo, Mamede de Carvalho, Nicola Ferro, Piero Fariselli, Jose Manuel García Dominguez, Sara C. Madeira, Eleonora Tavazzi
iDPP@CLEF 2023: The Intelligent Disease Progression Prediction Challenge. ECIR (3) (2023)
Antoine Passemiers, Pietro Folco, Daniele Raimondi, Giovanni Birolo, Yves Moreau, Piero Fariselli
How good Neural Networks interpretation methods really are? A quantitative benchmark. CoRR (2023)
Erica Tavazzi, Enrico Longato, Martina Vettoretti, Helena Aidos, Isotta Trescato, Chiara Roversi, Andreia S. Martins, Eduardo N. Castanho, Ruben Branco, Diogo F. Soares, Alessandro Guazzo, Giovanni Birolo, Daniele Pala, Pietro Bosoni, Adriano Chiò, Umberto Manera, Mamede de Carvalho, Bruno Miranda, Marta Gromicho, Inês Alves, Riccardo Bellazzi, Arianna Dagliati, Piero Fariselli, Sara C. Madeira, Barbara Di Camillo
Artificial intelligence and statistical methods for stratification and prediction of progression in amyotrophic lateral sclerosis: A systematic review. Artif. Intell. Medicine 142 (2023)
Guglielmo Faggioli, Alessandro Guazzo, Stefano Marchesin, Laura Menotti, Isotta Trescato, Helena Aidos, Roberto Bergamaschi, Giovanni Birolo, Paola Cavalla, Adriano Chiò, Arianna Dagliati, Mamede de Carvalho, Giorgio Maria Di Nunzio, Piero Fariselli, Jose Manuel García Dominguez, Marta Gromicho, Enrico Longato, Sara C. Madeira, Umberto Manera, Gianmaria Silvello, Eleonora Tavazzi, Erica Tavazzi, Martina Vettoretti, Barbara Di Camillo, Nicola Ferro
Overview of iDPP@CLEF 2023: The Intelligent Disease Progression Prediction Challenge. CLEF (Working Notes) (2023)
Guglielmo Faggioli, Alessandro Guazzo, Stefano Marchesin, Laura Menotti, Isotta Trescato, Helena Aidos, Roberto Bergamaschi, Giovanni Birolo, Paola Cavalla, Adriano Chiò, Arianna Dagliati, Mamede de Carvalho, Giorgio Maria Di Nunzio, Piero Fariselli, Jose Manuel García Dominguez, Marta Gromicho, Enrico Longato, Sara C. Madeira, Umberto Manera, Gianmaria Silvello, Eleonora Tavazzi, Erica Tavazzi, Martina Vettoretti, Barbara Di Camillo, Nicola Ferro
Intelligent Disease Progression Prediction: Overview of iDPP@CLEF 2023. CLEF (2023)
Emidio Capriotti, Piero Fariselli
PhD-SNPg: updating a webserver and lightweight tool for scoring nucleotide variants. Nucleic Acids Res. 51 (W1) (2023)
Serena Aneli, Piero Fariselli, Elena Chierto, Carla Bini, Carlo Robino, Giovanni Birolo
Recombulator-X: A fast and user-friendly tool for estimating X chromosome recombination rates in forensic genetics. PLoS Comput. Biol. 19 (9) (2023)
Ludovica Montanucci, Emidio Capriotti, Giovanni Birolo, Silvia Benevenuta, Corrado Pancotti, Dennis Lal, Piero Fariselli
DDGun: an untrained predictor of protein stability changes upon amino acid variants. Nucleic Acids Res. 50 (W1) (2022)
Guido Rovera, Piero Fariselli, Désirée Deandreis
Development of a REDCap-based workflow for high-volume relational data analysis on real-time data in a medical department using open source software. Comput. Methods Programs Biomed. 226 (2022)
Corrado Pancotti, Giovanni Birolo, Tiziana Sanavia, Cesare Rollo, Piero Fariselli
Multi-Event Survival Prediction for Amyotrophic Lateral Sclerosis. CLEF (Working Notes) (2022)
Alessandro Guazzo, Isotta Trescato, Enrico Longato, Enidia Hazizaj, Dennis Dosso, Guglielmo Faggioli, Giorgio Maria Di Nunzio, Gianmaria Silvello, Martina Vettoretti, Erica Tavazzi, Chiara Roversi, Piero Fariselli, Sara C. Madeira, Mamede de Carvalho, Marta Gromicho, Adriano Chiò, Umberto Manera, Arianna Dagliati, Giovanni Birolo, Helena Aidos, Barbara Di Camillo, Nicola Ferro
Intelligent Disease Progression Prediction: Overview of iDPP@CLEF 2022. CLEF (2022)
Daniele Raimondi, Gabriele Orlando, Nora Verplaetse, Piero Fariselli, Yves Moreau
Editorial: Towards genome interpretation: Computational methods to model the genotype-phenotype relationship. Frontiers Bioinform. 2 (2022)
Corrado Pancotti, Silvia Benevenuta, Giovanni Birolo, Virginia Alberini, Valeria Repetto, Tiziana Sanavia, Emidio Capriotti, Piero Fariselli
Predicting protein stability changes upon single-point mutation: a thorough comparison of the available tools on a new dataset. Briefings Bioinform. 23 (2) (2022)
Alessandro Guazzo, Isotta Trescato, Enrico Longato, Enidia Hazizaj, Dennis Dosso, Guglielmo Faggioli, Giorgio Maria Di Nunzio, Gianmaria Silvello, Martina Vettoretti, Erica Tavazzi, Chiara Roversi, Piero Fariselli, Sara C. Madeira, Mamede de Carvalho, Marta Gromicho, Adriano Chiò, Umberto Manera, Arianna Dagliati, Giovanni Birolo, Helena Aidos, Barbara Di Camillo, Nicola Ferro
Overview of iDPP@CLEF 2022: The Intelligent Disease Progression Prediction Challenge. CLEF (Working Notes) (2022)
Castrense Savojardo, Pier Luigi Martelli, Rita Casadio, Piero Fariselli
On the critical review of five machine learning-based algorithms for predicting protein stability changes upon mutation. Briefings Bioinform. 22 (1) (2021)
Piero Fariselli, Cristian Taccioli, Luca Pagani, Amos Maritan
DNA sequence symmetries from randomness: the origin of the Chargaff's second parity rule. Briefings Bioinform. 22 (2) (2021)
Silvia Benevenuta, Emidio Capriotti, Piero Fariselli
Calibrating variant-scoring methods for clinical decision making. Bioinform. 36 (24) (2021)
Daniele Raimondi, Gabriele Orlando, Piero Fariselli, Yves Moreau
Insight into the protein solubility driving forces with neural attention. PLoS Comput. Biol. 16 (4) (2020)
Ludovica Montanucci, Emidio Capriotti, Yotam Frank, Nir Ben-Tal, Piero Fariselli
DDGun: an untrained method for the prediction of protein stability changes upon single and multiple point variations. BMC Bioinform. (14) (2019)
Ludovica Montanucci, Pier Luigi Martelli, Nir Ben-Tal, Piero Fariselli
A natural upper bound to the accuracy of predicting protein stability changes upon mutations. Bioinform. 35 (9) (2019)
Ludovica Montanucci, Castrense Savojardo, Pier Luigi Martelli, Rita Casadio, Piero Fariselli
On the biases in predictions of protein stability changes upon variations: the INPS test case. Bioinform. 35 (14) (2019)
Emidio Capriotti, Ludovica Montanucci, Giuseppe Profiti, Ivan Rossi, Diana Giannuzzi, Luca Aresu, Piero Fariselli
Fido-SNP: the first webserver for scoring the impact of single nucleotide variants in the dog genome. Nucleic Acids Res. 47 (Webserver-Issue) (2019)
Giovanni Cugliari, Silvia Benevenuta, Simonetta Guarrera, Carlotta Sacerdote, Salvatore Panico, Vittorio Krogh, Rosario Tumino, Paolo Vineis, Piero Fariselli, Giuseppe Matullo
Improving the prediction of cardiovascular risk with machine-learning and DNA methylation data. CIBCB (2019)
Castrense Savojardo, Pier Luigi Martelli, Piero Fariselli, Rita Casadio
DeepSig: deep learning improves signal peptide detection in proteins. Bioinform. 34 (10) (2018)
Castrense Savojardo, Pier Luigi Martelli, Piero Fariselli, Giuseppe Profiti, Rita Casadio
BUSCA: an integrative web server to predict subcellular localization of proteins. Nucleic Acids Res. 46 (Webserver-Issue) (2018)
Castrense Savojardo, Piero Fariselli, Pier Luigi Martelli, Rita Casadio
ISPRED4: interaction sites PREDiction in protein structures with a refining grammar model. Bioinform. 33 (11) (2017)
Emidio Capriotti, Piero Fariselli
PhD-SNPg: a webserver and lightweight tool for scoring single nucleotide variants. Nucleic Acids Res. 45 (Webserver-Issue) (2017)
Castrense Savojardo, Pier Luigi Martelli, Piero Fariselli, Rita Casadio
SChloro: directing Viridiplantae proteins to six chloroplastic sub-compartments. Bioinform. 33 (3) (2017)
Castrense Savojardo, Piero Fariselli, Pier Luigi Martelli, Rita Casadio
INPS-MD: a web server to predict stability of protein variants from sequence and structure. Bioinform. 32 (16) (2016)
Samuele Bovo, Pietro Di Lena, Pier Luigi Martelli, Piero Fariselli, Rita Casadio
NET-GE: a web-server for NETwork-based human gene enrichment. Bioinform. 32 (22) (2016)
Piero Fariselli, Pier Luigi Martelli, Castrense Savojardo, Rita Casadio
INPS: predicting the impact of non-synonymous variations on protein stability from sequence. Bioinform. 31 (17) (2015)
Castrense Savojardo, Pier Luigi Martelli, Piero Fariselli, Rita Casadio
TPpred3 detects and discriminates mitochondrial and chloroplastic targeting peptides in eukaryotic proteins. Bioinform. 31 (20) (2015)
Giuseppe Profiti, Piero Fariselli, Rita Casadio
AlignBucket: a tool to speed up 'all-against-all' protein sequence alignments optimizing length constraints. Bioinform. 31 (23) (2015)
Castrense Savojardo, Pier Luigi Martelli, Piero Fariselli, Rita Casadio
TPpred2: improving the prediction of mitochondrial targeting peptide cleavage sites by exploiting sequence motifs. Bioinform. 30 (20) (2014)
Giuseppe Profiti, Damiano Piovesan, Pier Luigi Martelli, Piero Fariselli, Rita Casadio
Protein Sequence Annotation by means of Community Detection. IWBBIO (2013)
Valentina Indio, Pier Luigi Martelli, Castrense Savojardo, Piero Fariselli, Rita Casadio
The prediction of organelle-targeting peptides in eukaryotic proteins with Grammatical-Restrained Hidden Conditional Random Fields. Bioinform. 29 (8) (2013)
Giuseppe Profiti, Damiano Piovesan, Pier Luigi Martelli, Piero Fariselli, Rita Casadio
Community Detection within Clusters Helps Large Scale Protein Annotation - Preliminary Results of Modularity Maximization for the BAR+ Database. BIOINFORMATICS (2013)
Damiano Piovesan, Giuseppe Profiti, Pier Luigi Martelli, Piero Fariselli, Rita Casadio
Extended and Robust Protein Sequence Annotation over Conservative Nonhierarchical Clusters: The Case Study of the ABC Transporters. ACM J. Emerg. Technol. Comput. Syst. 9 (4) (2013)
Damiano Piovesan, Pier Luigi Martelli, Piero Fariselli, Giuseppe Profiti, Andrea Zauli, Ivan Rossi, Rita Casadio
How to inherit statistically validated annotation within BAR+ protein clusters. BMC Bioinform. 14 (S-3) (2013)
Castrense Savojardo, Piero Fariselli, Pier Luigi Martelli, Rita Casadio
BCov: a method for predicting β-sheet topology using sparse inverse covariance estimation and integer programming. Bioinform. 29 (24) (2013)
Castrense Savojardo, Piero Fariselli, Rita Casadio
BETAWARE: a machine-learning tool to detect and predict transmembrane beta-barrel proteins in prokaryotes. Bioinform. 29 (4) (2013)
Damiano Piovesan, Giuseppe Profiti, Pier Luigi Martelli, Piero Fariselli, Luca Fontanesi, Rita Casadio
SUS-BAR: a database of pig proteins with statistically validated structural and functional annotation. Database J. Biol. Databases Curation 2013 (2013)
Castrense Savojardo, Piero Fariselli, Pier Luigi Martelli, Rita Casadio
Prediction of disulfide connectivity in proteins with machine-learning methods and correlated mutations. BMC Bioinform. 14 (S-1) (2013)
Pietro di Lena, Piero Fariselli, Luciano Margara, Marco Vassura, Rita Casadio
Is There an Optimal Substitution Matrix for Contact Prediction with Correlated Mutations? IEEE ACM Trans. Comput. Biol. Bioinform. 8 (4) (2011)
Castrense Savojardo, Piero Fariselli, Damiano Piovesan, Pier Luigi Martelli, Rita Casadio
Machine-Learning Methods to Predict Protein Interaction Sites in Folded Proteins. CIBB (2011)
Pier Luigi Martelli, Mattia D'Antonio, Paola Bonizzoni, Tiziana Castrignanò, Anna Maria D'Erchia, Paolo D'Onorio De Meo, Piero Fariselli, Michele Finelli, Flavio Licciulli, Marina Mangiulli, Flavio Mignone, Giulio Pavesi, Ernesto Picardi, Raffaella Rizzi, Ivan Rossi, Alessio Valletti, Andrea Zauli, Federico Zambelli, Rita Casadio, Graziano Pesole
ASPicDB: a database of annotated transcript and protein variants generated by alternative splicing. Nucleic Acids Res. 39 (Database-Issue) (2011)
Marco Vassura, Pietro di Lena, Luciano Margara, Maria Mirto, Giovanni Aloisio, Piero Fariselli, Rita Casadio
Blurring contact maps of thousands of proteins: what we can learn by reconstructing 3D structure. BioData Min. 4 (2011)
Castrense Savojardo, Piero Fariselli, Monther Alhamdoosh, Pier Luigi Martelli, Andrea Pierleoni, Rita Casadio
Improving the prediction of disulfide bonds in Eukaryotes with machine learning methods and protein subcellular localization. Bioinform. 27 (16) (2011)
Monther Alhamdoosh, Castrense Savojardo, Piero Fariselli, Rita Casadio
Disulfide Connectivity Prediction with Extreme Learning Machines. BIOINFORMATICS (2011)
Andrea Pierleoni, Valentina Indio, Castrense Savojardo, Piero Fariselli, Pier Luigi Martelli, Rita Casadio
MemPype: a pipeline for the annotation of eukaryotic membrane proteins. Nucleic Acids Res. 39 (Web-Server-Issue) (2011)
Damiano Piovesan, Pier Luigi Martelli, Piero Fariselli, Andrea Zauli, Ivan Rossi, Rita Casadio
BAR-PLUS: the Bologna Annotation Resource Plus for functional and structural annotation of protein sequences. Nucleic Acids Res. 39 (Web-Server-Issue) (2011)
Castrense Savojardo, Piero Fariselli, Rita Casadio
Improving the detection of transmembrane β-barrel chains with N-to-1 extreme learning machines. Bioinform. 27 (22) (2011)
Castrense Savojardo, Piero Fariselli, Pier Luigi Martelli, Priyank Shukla, Rita Casadio
Prediction of the Bonding State of Cysteine Residues in Proteins with Machine-Learning Methods. CIBB (2010)
Pietro di Lena, Piero Fariselli, Luciano Margara, Marco Vassura, Rita Casadio
Fast overlapping of protein contact maps by alignment of eigenvectors. Bioinform. 26 (18) (2010)
Marco Vassura, Luciano Margara, Piero Fariselli, Rita Casadio
A graph theoretic approach to protein structure selection. Artif. Intell. Medicine 45 (2-3) (2009)
Piero Fariselli, Castrense Savojardo, Pier Luigi Martelli, Rita Casadio
Grammatical-Restrained Hidden Conditional Random Fields for Bioinformatics applications. Algorithms Mol. Biol. 4 (2009)
Lisa Bartoli, Pier Luigi Martelli, Ivan Rossi, Piero Fariselli, Rita Casadio
Prediction of Protein-Protein Interacting Sites: How to Bridge Molecular Events to Large Scale Protein Interaction Networks. CMSB (2009)
Piero Fariselli, Lisa Bartoli, Rita Casadio
Improving Coiled-Coil Prediction with Evolutionary Information. CIBB (2009)
Pietro di Lena, Piero Fariselli, Luciano Margara, Marco Vassura, Rita Casadio
On the Upper Bound of the Prediction Accuracy of Residue Contacts in Proteins with Correlated Mutations: The Case Study of the Similarity Matrices. WABI (2009)
Iakes Ezkurdia, Lisa Bartoli, Piero Fariselli, Rita Casadio, Alfonso Valencia, Michael L. Tress
Progress and challenges in predicting protein-protein interaction sites. Briefings Bioinform. 10 (3) (2009)
Pietro di Lena, Marco Vassura, Luciano Margara, Piero Fariselli, Rita Casadio
On the Reconstruction of Three-dimensional Protein Structures from Contact Maps. Algorithms 2 (1) (2009)
Lisa Bartoli, Piero Fariselli, Anders Krogh, Rita Casadio
CCHMM_PROF: a HMM-based coiled-coil predictor with evolutionary information. Bioinform. 25 (21) (2009)
Pietro di Lena, Luciano Margara, Marco Vassura, Piero Fariselli, Rita Casadio
A New Protein Representation Based on Fragment Contacts: Towards an Improvement of Contact Maps Predictions. CIBB (2008)
Marco Vassura, Luciano Margara, Pietro di Lena, Filippo Medri, Piero Fariselli, Rita Casadio
Reconstruction of 3D Structures From Protein Contact Maps. IEEE ACM Trans. Comput. Biol. Bioinform. 5 (3) (2008)
Ludovica Montanucci, Piero Fariselli, Pier Luigi Martelli, Rita Casadio
Predicting protein thermostability changes from sequence upon multiple mutations. ISMB (2008)
Emidio Capriotti, Piero Fariselli, Ivan Rossi, Rita Casadio
A three-state prediction of single point mutations on protein stability changes. BMC Bioinform. 9 (S-2) (2008)
Marco Vassura, Luciano Margara, Pietro di Lena, Filippo Medri, Piero Fariselli, Rita Casadio
FT-COMAR: fault tolerant three-dimensional structure reconstruction from protein contact maps. Bioinform. 24 (10) (2008)
Marco Vassura, Luciano Margara, Filippo Medri, Pietro di Lena, Piero Fariselli, Rita Casadio
Reconstruction of 3D Structures from Protein Contact Maps. ISBRA (2007)
Andrea Pierleoni, Pier Luigi Martelli, Piero Fariselli, Rita Casadio
eSLDB: eukaryotic subcellular localization database. Nucleic Acids Res. 35 (Database-Issue) (2007)
Lisa Bartoli, Remo Calabrese, Piero Fariselli, Damiano G. Mita, Rita Casadio
A computational approach for detecting peptidases and their specific inhibitors at the genome level. BMC Bioinform. 8 (S-1) (2007)
Luciana Carota, Lisa Bartoli, Piero Fariselli, Pier Luigi Martelli, Ludovica Montanucci, Giorgio Pietro Maggi, Rita Casadio
High Throughput Comparison of Prokaryotic Genomes. PPAM (2007)
Marco Vassura, Luciano Margara, Pietro di Lena, Filippo Medri, Piero Fariselli, Rita Casadio
Fault Tolerance for Large Scale Protein 3D Reconstruction from Contact Maps. WABI (2007)
Maria Mirto, Ivan Rossi, Italo Epicoco, Sandro Fiore, Piero Fariselli, Rita Casadio, Giovanni Aloisio
High Throughput Protein Similarity Searches in the LIBI Grid Problem Solving Environment. ISPA Workshops (2007)
Marco Vassura, Luciano Margara, Piero Fariselli, Rita Casadio
A Graph Theoretic Approach to Protein Structure Selection. WILF (2007)
Piero Fariselli, Ivan Rossi, Emidio Capriotti, Rita Casadio
The WWWH of remote homolog detection: The state of the art. Briefings Bioinform. 8 (2) (2007)
Piero Fariselli, Daniele Molinini, Rita Casadio, Anders Krogh
Prediction of Structurally-Determined Coiled-Coil Domains with Hidden Markov Models. BIRD (2007)
Andrea Pierleoni, Pier Luigi Martelli, Piero Fariselli, Rita Casadio
BaCelLo: a balanced subcellular localization predictor. ISMB (Supplement of Bioinformatics) (2006)
Mauro Amico, Michele Finelli, Ivan Rossi, Andrea Zauli, Arne Elofsson, Håkan Viklund, Gunnar von Heijne, David Jones, Anders Krogh, Piero Fariselli, Pier Luigi Martelli, Rita Casadio
PONGO: a web server for multiple predictions of all-alpha transmembrane proteins. Nucleic Acids Res. 34 (Web-Server-Issue) (2006)
Piero Fariselli, Pier Luigi Martelli, Rita Casadio
A new decoding algorithm for hidden Markov models improves the prediction of the topology of all-beta membrane proteins. BMC Bioinform. 6 (S-4) (2005)
Emidio Capriotti, Piero Fariselli, Remo Calabrese, Rita Casadio
Predicting protein stability changes from sequences using support vector machines. ECCB/JBI (2005)
Piero Fariselli, Michele Finelli, Ivan Rossi, Mauro Amico, Andrea Zauli, Pier Luigi Martelli, Rita Casadio
TRAMPLE: the transmembrane protein labelling environment. Nucleic Acids Res. 33 (Web-Server-Issue) (2005)
Emidio Capriotti, Piero Fariselli, Rita Casadio
I-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structure. Nucleic Acids Res. 33 (Web-Server-Issue) (2005)
Emidio Capriotti, Piero Fariselli, Rita Casadio
A neural-network-based method for predicting protein stability changes upon single point mutations. ISMB/ECCB (Supplement of Bioinformatics) (2004)
Carine Berezin, Fabian Glaser, Josef Rosenberg, Inbal Paz, Tal Pupko, Piero Fariselli, Rita Casadio, Nir Ben-Tal
ConSeq: the identification of functionally and structurally important residues in protein sequences. Bioinform. 20 (8) (2004)
Piero Fariselli, Giacomo Finocchiaro, Rita Casadio
Prediction of Signal Peptide in Proteins with Neural Networks. WIRN (2003)
Piero Fariselli, Giacomo Finocchiaro, Rita Casadio
SPEPlip: the detection of signal peptide and lipoprotein cleavage sites. Bioinform. 19 (18) (2003)
Piero Fariselli, Michele Finelli, Davide Marchignoli, Pier Luigi Martelli, Ivan Rossi, Rita Casadio
MaxSubSeq: an algorithm for segment-length optimization. The case study of the transmembrane spanning segments. Bioinform. 19 (4) (2003)
Pier Luigi Martelli, Piero Fariselli, Rita Casadio
An ENSEMBLE machine learning approach for the prediction of all-alpha membrane proteins. ISMB (Supplement of Bioinformatics) (2003)
Piero Fariselli, Andrea Zauli, Ivan Rossi, Michele Finelli, Pier Luigi Martelli, Rita Casadio
A neural network method to improve prediction of protein-protein interaction sites in heterocomplexes. NNSP (2003)
Rita Casadio, Piero Fariselli, Pier Luigi Martelli
In silico prediction of the structure of membrane proteins: Is it feasible? Briefings Bioinform. 4 (4) (2003)
Pier Luigi Martelli, Piero Fariselli, Anders Krogh, Rita Casadio
A sequence-profile-based HMM for predicting and discriminating beta barrel membrane proteins. ISMB (2002)
Gianluca Pollastri, Pierre Baldi, Piero Fariselli, Rita Casadio
Improved prediction of the number of residue contacts in proteins by recurrent neural networks. ISMB (Supplement of Bioinformatics) (2001)
Piero Fariselli, Rita Casadio
Prediction of disulfide connectivity in proteins. Bioinform. 17 (10) (2001)
Piero Fariselli, Rita Casadio
RCNPRED: prediction of the residue co-ordination numbers in proteins. Bioinform. 17 (1) (2001)

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Publication Activity (10 Years)

Top Topics

Top Venues

Piero Fariselli