WABI

Keyphrases

Publications

2023

Pawel Górecki, Natalia Rutecka, Agnieszka Mykowiecka, Jaroslaw Paszek
Simultaneous Reconstruction of Duplication Episodes and Gene-Species Mappings. WABI (2023)
Xinyu Gu, Yuanyuan Qi, Mohammed El-Kebir
Balancing Minimum Free Energy and Codon Adaptation Index for Pareto Optimal RNA Design. WABI (2023)
Tizian Schulz, Paul Medvedev
Exact Sketch-Based Read Mapping. WABI (2023)
Mateo Gray, Sebastian Will, Hosna Jabbari
SparseRNAFolD: Sparse RNA Pseudoknot-Free Folding Including Dangles. WABI (2023)
Jyotshna Rajput, Ghanshyam Chandra, Chirag Jain
Co-Linear Chaining on Pangenome Graphs. WABI (2023)
Timothé Rouzé, Igor Martayan, Camille Marchet, Antoine Limasset
Fractional Hitting Sets for Efficient and Lightweight Genomic Data Sketching. WABI (2023)
Chengze Shen, Baqiao Liu, Kelly P. Williams, Tandy J. Warnow
EMMA: Adding Sequences into a Constraint Alignment with High Accuracy and Scalability (Abstract). WABI (2023)
Leo van Iersel, Mark Jones, Esther Julien, Yukihiro Murakami
Making a Network Orchard by Adding Leaves. WABI (2023)
Teresa M. Przytycka
Algorithmic Approaches to Study Mutational Processes in Cancer (Invited Talk). WABI (2023)
Jamshed Khan, Tobias Rubel, Laxman Dhulipala, Erin K. Molloy, Rob Patro
Fast, Parallel, and Cache-Friendly Suffix Array Construction. WABI (2023)
Yutong Qiu, Yihang Shen, Carl Kingsford
Revisiting the Complexity of and Algorithms for the Graph Traversal Edit Distance and Its Variants. WABI (2023)
Shayesteh Arasti, Siavash Mirarab
Optimal Subtree Prune and Regraft for Quartet Score in Sub-Quadratic Time. WABI (2023)
Leonard Bohnenkämper
Bridging Disparate Views on the DCJ-Indel Model for a Capping-Free Solution to the Natural Distance Problem. WABI (2023)
Mrinmoy Saha Roddur, Sagi Snir, Mohammed El-Kebir
Inferring Temporally Consistent Migration Histories. WABI (2023)
Amatur Rahman, Yoann Dufresne, Paul Medvedev
Compression Algorithm for Colored de Bruijn Graphs. WABI (2023)
Théo Boury, Yann Ponty, Vladimir Reinharz
Automatic Exploration of the Natural Variability of RNA Non-Canonical Geometric Patterns with a Parameterized Sampling Technique. WABI (2023)
Mohsen Ferdosi, Yuejun Ge, Carl Kingsford
Reinforcement Learning for Robotic Liquid Handler Planning. WABI (2023)
Nicola Rizzo, Manuel Cáceres, Veli Mäkinen
Finding Maximal Exact Matches in Graphs. WABI (2023)
Jason Fan, Noor Pratap Singh, Jamshed Khan, Giulio Ermanno Pibiri, Rob Patro
Fulgor: A Fast and Compact {k-mer} Index for Large-Scale Matching and Color Queries. WABI (2023)
Eleanor Wedell, Chengze Shen, Tandy J. Warnow
BATCH-SCAMPP: Scaling Phylogenetic Placement Methods to Place Many Sequences (Abstract). WABI (2023)
Front Matter, Table of Contents, Preface, Conference Organization. WABI (2023)
Yunheng Han, Erin K. Molloy
Quartets Enable Statistically Consistent Estimation of Cell Lineage Trees Under an Unbiased Error and Missingness Model (Abstract). WABI (2023)
Aaron Hong, Marco Oliva, Dominik Köppl, Hideo Bannai, Christina Boucher, Travis Gagie
Acceleration of FM-Index Queries Through Prefix-Free Parsing. WABI (2023)
Junyan Dai, Tobias Rubel, Yunheng Han, Erin K. Molloy
Leveraging Constraints Plus Dynamic Programming for the Large Dollo Parsimony Problem. WABI (2023)

volume 273, 2023

23rd International Workshop on Algorithms in Bioinformatics, WABI 2023, September 4-6, 2023, Houston, TX, USA WABI 273 (2023)

2022

volume 242, 2022

22nd International Workshop on Algorithms in Bioinformatics, WABI 2022, September 5-7, 2022, Potsdam, Germany. WABI 242 (2022)