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Jamshed Khan
ORCID
Publication Activity (10 Years)
Years Active: 2021-2024
Publications (10 Years): 7
Top Topics
Suffix Array
Indexing Method
Top Venues
Bioinform.
WABI
RECOMB
Axioms
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Publications
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Jason Fan
,
Jamshed Khan
,
Noor Pratap Singh
,
Giulio Ermanno Pibiri
,
Rob Patro
Fulgor: a fast and compact k-mer index for large-scale matching and color queries.
Algorithms Mol. Biol.
19 (1) (2024)
Jason Fan
,
Noor Pratap Singh
,
Jamshed Khan
,
Giulio Ermanno Pibiri
,
Rob Patro
Fulgor: A Fast and Compact {k-mer} Index for Large-Scale Matching and Color Queries.
WABI
(2023)
Jamshed Khan
,
Tobias Rubel
,
Laxman Dhulipala
,
Erin K. Molloy
,
Rob Patro
Fast, Parallel, and Cache-Friendly Suffix Array Construction.
WABI
(2023)
Jason Fan
,
Jamshed Khan
,
Giulio Ermanno Pibiri
,
Rob Patro
Spectrum Preserving Tilings Enable Sparse and Modular Reference Indexing.
RECOMB
(2023)
Jamshed Khan
,
Tahir Hussain
,
Dania Santina
,
Nabil Mlaiki
Homothetic Symmetries of Static Cylindrically Symmetric Spacetimes - A Rif Tree Approach.
Axioms
11 (10) (2022)
Fatemeh Almodaresi
,
Jamshed Khan
,
Sergey Madaminov
,
Michael Ferdman
,
Rob Johnson
,
Prashant Pandey
,
Rob Patro
An incrementally updatable and scalable system for large-scale sequence search using the Bentley-Saxe transformation.
Bioinform.
38 (12) (2022)
Jamshed Khan
,
Rob Patro
Cuttlefish: fast, parallel and low-memory compaction of de Bruijn graphs from large-scale genome collections.
Bioinform.
37 (Supplement) (2021)