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Chengze Shen
ORCID
Publication Activity (10 Years)
Years Active: 2022-2023
Publications (10 Years): 5
Top Topics
High Accuracy
Biological Sequences
Phylogenetic Trees
Baum Welch
Top Venues
WABI
Bioinform.
J. Comput. Biol.
Algorithms Mol. Biol.
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Publications
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Chengze Shen
,
Baqiao Liu
,
Kelly P. Williams
,
Tandy J. Warnow
EMMA: Adding Sequences into a Constraint Alignment with High Accuracy and Scalability (Abstract).
WABI
(2023)
Eleanor Wedell
,
Chengze Shen
,
Tandy J. Warnow
BATCH-SCAMPP: Scaling Phylogenetic Placement Methods to Place Many Sequences (Abstract).
WABI
(2023)
Chengze Shen
,
Baqiao Liu
,
Kelly P. Williams
,
Tandy J. Warnow
EMMA: a new method for computing multiple sequence alignments given a constraint subset alignment.
Algorithms Mol. Biol.
18 (1) (2023)
Chengze Shen
,
Minhyuk Park
,
Tandy J. Warnow
WITCH: Improved Multiple Sequence Alignment Through Weighted Consensus Hidden Markov Model Alignment.
J. Comput. Biol.
29 (8) (2022)
Chengze Shen
,
Paul Zaharias
,
Tandy J. Warnow
MAGUS+eHMMs: improved multiple sequence alignment accuracy for fragmentary sequences.
Bioinform.
38 (4) (2022)