Paul Zaharias

Publication Activity (10 Years)

Years Active: 2021-2023
Publications (10 Years): 6

Top Topics

Ontology Merging

Multiple Sequence Alignments

Top Venues

J. Comput. Biol.

Publications

Paul Zaharias, Vladimir Smirnov, Tandy J. Warnow
Large-Scale Multiple Sequence Alignment and the Maximum Weight Trace Alignment Merging Problem. IEEE ACM Trans. Comput. Biol. Bioinform. 20 (3) (2023)
Chengze Shen, Paul Zaharias, Tandy J. Warnow
MAGUS+eHMMs: improved multiple sequence alignment accuracy for fragmentary sequences. Bioinform. 38 (4) (2022)
Paul Zaharias, Martin Grosshauser, Tandy J. Warnow
Re-evaluating Deep Neural Networks for Phylogeny Estimation: The Issue of Taxon Sampling. J. Comput. Biol. 29 (1) (2022)
Minhyuk Park, Paul Zaharias, Tandy J. Warnow
Disjoint Tree Mergers for Large-Scale Maximum Likelihood Tree Estimation. Algorithms 14 (5) (2021)
Paul Zaharias, Vladimir Smirnov, Tandy J. Warnow
The Maximum Weight Trace Alignment Merging Problem. AlCoB (2021)
Maya Gupta, Paul Zaharias, Tandy J. Warnow
Accurate large-scale phylogeny-aware alignment using BAli-Phy. Bioinform. 37 (24) (2021)