Sarah J. Berkemer

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 7

Top Topics

Tree Decomposition

Automated Design

Top Venues

Algorithms Mol. Biol.

Math. Comput. Sci.

Publications

Hua-Ting Yao, Bertrand Marchand, Sarah J. Berkemer, Yann Ponty, Sebastian Will
Infrared: a declarative tree decomposition-powered framework for bioinformatics. Algorithms Mol. Biol. 19 (1) (2024)
Kimon Boehmer, Sarah J. Berkemer, Sebastian Will, Yann Ponty
RNA Triplet Repeats: Improved Algorithms for Structure Prediction and Interactions. WABI (2024)
Marie-Olive Thaury, Simon Genet, Léopold Maurice, Paola Tubaro, Sarah J. Berkemer
City composition and accessibility statistics in and around Paris. Frontiers Big Data 7 (2024)
Bertrand Marchand, Sebastian Will, Sarah J. Berkemer, Yann Ponty, Laurent Bulteau
Automated design of dynamic programming schemes for RNA folding with pseudoknots. Algorithms Mol. Biol. 18 (1) (2023)
Bertrand Marchand, Sebastian Will, Sarah J. Berkemer, Laurent Bulteau, Yann Ponty
Automated Design of Dynamic Programming Schemes for RNA Folding with Pseudoknots. WABI (2022)
Sarah J. Berkemer, Christian Höner zu Siederdissen, Peter F. Stadler
Compositional Properties of Alignments. Math. Comput. Sci. 15 (4) (2021)
Sarah J. Berkemer, Christian Höner zu Siederdissen, Peter F. Stadler
Alignments as Compositional Structures. CoRR (2018)