AlignBucket: a tool to speed up 'all-against-all' protein sequence alignments optimizing length constraints.
Giuseppe ProfitiPiero FariselliRita CasadioPublished in: Bioinform. (2015)
Keyphrases
- protein sequences
- multiple alignment
- multiple sequence alignment
- sequence alignment
- protein structure
- computational biology
- multiple sequence alignments
- amino acids
- secondary structure
- protein structure prediction
- protein structure and function
- protein secondary structure
- structural motifs
- protein classification
- sequence analysis
- protein folding
- coarse grained
- logistic regression
- amino acid sequences
- feature selection
- physico chemical
- fine grained