Emidio Capriotti

Publication Activity (10 Years)

Years Active: 2004-2023
Publications (10 Years): 8

Top Topics

Scoring Methods

Clinical Decision Making

Predicting Protein

Tertiary Structure

Top Venues

Nucleic Acids Res.

Publications

Emidio Capriotti, Piero Fariselli
PhD-SNPg: updating a webserver and lightweight tool for scoring nucleotide variants. Nucleic Acids Res. 51 (W1) (2023)
Ludovica Montanucci, Emidio Capriotti, Giovanni Birolo, Silvia Benevenuta, Corrado Pancotti, Dennis Lal, Piero Fariselli
DDGun: an untrained predictor of protein stability changes upon amino acid variants. Nucleic Acids Res. 50 (W1) (2022)
Corrado Pancotti, Silvia Benevenuta, Giovanni Birolo, Virginia Alberini, Valeria Repetto, Tiziana Sanavia, Emidio Capriotti, Piero Fariselli
Predicting protein stability changes upon single-point mutation: a thorough comparison of the available tools on a new dataset. Briefings Bioinform. 23 (2) (2022)
Silvia Benevenuta, Emidio Capriotti, Piero Fariselli
Calibrating variant-scoring methods for clinical decision making. Bioinform. 36 (24) (2021)
Ludovica Montanucci, Emidio Capriotti, Yotam Frank, Nir Ben-Tal, Piero Fariselli
DDGun: an untrained method for the prediction of protein stability changes upon single and multiple point variations. BMC Bioinform. (14) (2019)
Linlin Zhao, Nima Abedpour, Christopher Blum, Petra Kolkhof, Mathias Beller, Markus Kollmann, Emidio Capriotti
Predicting gene expression level in E. coli from mRNA sequence information. CIBCB (2019)
Emidio Capriotti, Ludovica Montanucci, Giuseppe Profiti, Ivan Rossi, Diana Giannuzzi, Luca Aresu, Piero Fariselli
Fido-SNP: the first webserver for scoring the impact of single nucleotide variants in the dog genome. Nucleic Acids Res. 47 (Webserver-Issue) (2019)
Emidio Capriotti, Piero Fariselli
PhD-SNPg: a webserver and lightweight tool for scoring single nucleotide variants. Nucleic Acids Res. 45 (Webserver-Issue) (2017)
Jacinte Beerten, Joost J. J. van Durme, Rodrigo Gallardo, Emidio Capriotti, Louise C. Serpell, Frederic Rousseau, Joost Schymkowitz
WALTZ-DB: a benchmark database of amyloidogenic hexapeptides. Bioinform. 31 (10) (2015)
Yana Bromberg, Emidio Capriotti
Editor's Choice: SNP-SIG 2013: the state of the art of genomic variant interpretation. Bioinform. 31 (3) (2015)
Rui Tian, Malay Kumar Basu, Emidio Capriotti
ContrastRank: a new method for ranking putative cancer driver genes and classification of tumor samples. Bioinform. 30 (17) (2014)
Paolo Di Tommaso, Giovanni Bussotti, Carsten Kemena, Emidio Capriotti, Maria Chatzou, Pablo Prieto, Cédric Notredame
SARA-Coffee web server, a tool for the computation of RNA sequence and structure multiple alignments. Nucleic Acids Res. 42 (Webserver-Issue) (2014)
Tomás Norambuena, Jorge F. Cares, Emidio Capriotti, Francisco Melo
WebRASP: a server for computing energy scores to assess the accuracy and stability of RNA 3D structures. Bioinform. 29 (20) (2013)
Carsten Kemena, Giovanni Bussotti, Emidio Capriotti, Marc A. Martí-Renom, Cédric Notredame
Using tertiary structure for the computation of highly accurate multiple RNA alignments with the SARA-Coffee package. Bioinform. 29 (9) (2013)
Emidio Capriotti, Nathan L. Nehrt, Maricel G. Kann, Yana Bromberg
Bioinformatics for personal genome interpretation. Briefings Bioinform. 13 (4) (2012)
Can Alkan, Emidio Capriotti, Eleazar Eskin, Fereydoun Hormozdiari, Maricel G. Kann
Session Introduction. Pacific Symposium on Biocomputing (2011)
Emidio Capriotti, Russ B. Altman
Improving the prediction of disease-related variants using protein three-dimensional structure. BMC Bioinform. 12 (S-4) (2011)
Guy Haskin Fernald, Emidio Capriotti, Roxana Daneshjou, Konrad J. Karczewski, Russ B. Altman
Bioinformatics challenges for personalized medicine. Bioinform. 27 (16) (2011)
Guy Haskin Fernald, Emidio Capriotti, Roxana Daneshjou, Konrad J. Karczewski, Russ B. Altman
Genome Analysis. Bioinform. 27 (13) (2011)
Emidio Capriotti, Tomás Norambuena, Marc A. Martí-Renom, Francisco Melo
All-atom knowledge-based potential for RNA structure prediction and assessment. Bioinform. 27 (8) (2011)
Emidio Capriotti, Marc A. Martí-Renom
Quantifying the relationship between sequence and three-dimensional structure conservation in RNA. BMC Bioinform. 11 (2010)
Emidio Capriotti, Marc A. Martí-Renom
SARA: a server for function annotation of RNA structures. Nucleic Acids Res. 37 (Web-Server-Issue) (2009)
Emidio Capriotti, Marc A. Martí-Renom
RNA structure alignment by a unit-vector approach. ECCB (2008)
Emidio Capriotti, Piero Fariselli, Ivan Rossi, Rita Casadio
A three-state prediction of single point mutations on protein stability changes. BMC Bioinform. 9 (S-2) (2008)
Piero Fariselli, Ivan Rossi, Emidio Capriotti, Rita Casadio
The WWWH of remote homolog detection: The state of the art. Briefings Bioinform. 8 (2) (2007)
Emidio Capriotti, Rita Casadio
K-Fold: a tool for the prediction of the protein folding kinetic order and rate. Bioinform. 23 (3) (2007)
Emidio Capriotti, Remo Calabrese, Rita Casadio
Predicting the insurgence of human genetic diseases associated to single point protein mutations with support vector machines and evolutionary information. Bioinform. 22 (22) (2006)
Emidio Capriotti, Piero Fariselli, Remo Calabrese, Rita Casadio
Predicting protein stability changes from sequences using support vector machines. ECCB/JBI (2005)
Emidio Capriotti, Piero Fariselli, Rita Casadio
I-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structure. Nucleic Acids Res. 33 (Web-Server-Issue) (2005)
Emidio Capriotti, Piero Fariselli, Rita Casadio
A neural-network-based method for predicting protein stability changes upon single point mutations. ISMB/ECCB (Supplement of Bioinformatics) (2004)