ECCB/JBI

Keyphrases

Publications

2005

Yiping Zhan, David Kulp
Model-P: a basecalling method for resequencing microarrays of diploid samples. ECCB/JBI (2005)
Itay Mayrose, Nir Friedman, Tal Pupko
A Gamma mixture model better accounts for among site rate heterogeneity. ECCB/JBI (2005)
Andreas Prlic, Thomas A. Down, Tim J. P. Hubbard
Adding Some SPICE to DAS. ECCB/JBI (2005)
Joseph D. Szustakowski, Simon Kasif, Zhiping Weng
Less is more: towards an optimal universal description of protein folds. ECCB/JBI (2005)
Kristin Missal, Dominic Rose, Peter F. Stadler
. ECCB/JBI (2005)
Tran Hoai Nam, Chitta Baral, Vinay J. Nagaraj, Lokesh Joshi
Knowledge-based framework for hypothesis formation in biochemical networks. ECCB/JBI (2005)
Elisabeth Georgii, Lothar Richter, Ulrich Rückert, Stefan Kramer
Analyzing microarray data using quantitative association rules. ECCB/JBI (2005)
Toni Gabaldón, Martijn A. Huynen
Lineage-specific gene loss following mitochondrial endosymbiosis and its potential for function prediction in eukaryotes. ECCB/JBI (2005)
Alejandro Giorgetti, Domenico Raimondo, Adriana Erica Miele, Anna Tramontano
Evaluating the usefulness of protein structure models for molecular replacement. ECCB/JBI (2005)
Mathieu Lajoie, Nadia El-Mabrouk
Recovering haplotype structure through recombination and gene conversion. ECCB/JBI (2005)
Eugene W. Myers
The fragment assembly string graph. ECCB/JBI (2005)
Dirk Husmeier
Discriminating between rate heterogeneity and interspecific recombination in DNA sequence alignments with phylogenetic factorial hidden Markov models. ECCB/JBI (2005)
Oranit Dror, Ruth Nussinov, Haim J. Wolfson
ARTS: alignment of RNA tertiary structures. ECCB/JBI (2005)
Myungeun Lim, Myunggeun Chung, Myungnam Bae, Sunhee Park
Design of a description language for generating wrapper to collect biological data. ECCB/JBI (2005)
Sjors H. W. Scheres, Mikel Valle, José María Carazo
Fast maximum-likelihood refinement of electron microscopy images. ECCB/JBI (2005)
Florian Sohler, Ralf Zimmer
Identifying active transcription factors and kinases from expression data using pathway queries. ECCB/JBI (2005)
Tomàs Marquès-Bonet, Oscar Lao, Robert Goertsches, Manuel Comabella, Xavier Montalban, Arcadi Navarro
Association Cluster Detector: a tool for heuristic detection of significance clusters in whole-genome scans. ECCB/JBI (2005)
Emidio Capriotti, Piero Fariselli, Remo Calabrese, Rita Casadio
Predicting protein stability changes from sequences using support vector machines. ECCB/JBI (2005)
Cigdem Demir, S. Humayun Gultekin, Bülent Yener
Augmented cell-graphs for automated cancer diagnosis. ECCB/JBI (2005)
Naoki Nariai, Yoshinori Tamada, Seiya Imoto, Satoru Miyano
from multiple genome-wide data. ECCB/JBI (2005)
Martin Szugat, Daniel Güttler, Katrin Fundel, Florian Sohler, Ralf Zimmer
Web servicing the biological office. ECCB/JBI (2005)
Gisele L. Pappa, Anthony J. Baines, Alex Alves Freitas
Predicting post-synaptic activity in proteins with data mining. ECCB/JBI (2005)
Dmitriy Leyfer, Zhiping Weng
-element and expression clustering. ECCB/JBI (2005)
Robert Hoffmann, Alfonso Valencia
Implementing the iHOP concept for navigation of biomedical literature. ECCB/JBI (2005)
Roderic Guigó, Federico Morán, Alfonso Valencia, Josep F. Abril
ECCB/JBI 2005. ECCB/JBI (2005)
C. Vogl, Fátima Sánchez-Cabo, Gernot Stocker, Simon J. Hubbard, Olaf Wolkenhauer, Zlatko Trajanoski
A fully Bayesian model to cluster gene-expression profiles. ECCB/JBI (2005)
Roland Arnold, Thomas Rattei, Patrick Tischler, Minh-Duc Truong, Volker Stümpflen, Hans-Werner Mewes
SIMAP - The similarity matrix of proteins. ECCB/JBI (2005)
Ulf Leser
A query language for biological networks. ECCB/JBI (2005)
Shanfeng Zhu, Yasushi Okuno, Gozoh Tsujimoto, Hiroshi Mamitsuka
A probabilistic model for mining implicit 'chemical compound-gene' relations from literature. ECCB/JBI (2005)
Mario Albrecht, Carola Huthmacher, Silvio C. E. Tosatto, Thomas Lengauer
Decomposing protein networks into domain-domain interactions. ECCB/JBI (2005)
Henry C. M. Leung, Francis Y. L. Chin
Finding exact optimal motifs in matrix representation by partitioning. ECCB/JBI (2005)
ECCB/JBI 2005 Organization. ECCB/JBI (2005)
David de Juan, Mario Mellado, José Miguel Rodríguez-Frade, Patricia Hernanz-Falcón, Antonio Serrano, Antonio del Sol, Alfonso Valencia, Carlos Martínez-A, Ana María Rojas
A framework for computational and experimental methods: Identifying dimerization residues in CCR chemokine receptors. ECCB/JBI (2005)
Kengo Sato, Yasubumi Sakakibara
RNA secondary structural alignment with conditional random fields. ECCB/JBI (2005)
Koji Tsuda, Hyunjung Shin, Bernhard Schölkopf
Fast protein classification with multiple networks. ECCB/JBI (2005)
Olga Vitek, Chris Bailey-Kellogg, Bruce A. Craig, Paul Kuliniewicz, Jan Vitek
Reconsidering complete search algorithms for protein backbone NMR assignment. ECCB/JBI (2005)
Sungroh Yoon, Giovanni De Micheli
Prediction of regulatory modules comprising microRNAs and target genes. ECCB/JBI (2005)
Robert Küffner, Katrin Fundel, Ralf Zimmer
Expert knowledge without the expert: integrated analysis of gene expression and literature to derive active functional contexts. ECCB/JBI (2005)
Tho Hoan Pham, José Carlos Clemente, Kenji Satou, Tu Bao Ho
Computational discovery of transcriptional regulatory rules. ECCB/JBI (2005)
E. Simão, Elisabeth Remy, Denis Thieffry, Claudine Chaouiya
. ECCB/JBI (2005)
Csaba Pál, Balázs Papp, Martin J. Lercher
Horizontal gene transfer depends on gene content of the host. ECCB/JBI (2005)
Jean-Marc Schwartz, Minoru Kanehisa
A quadratic programming approach for decomposing steady-state metabolic flux distributions onto elementary modes. ECCB/JBI (2005)
Sònia Casillas, Natalia Petit, Antonio Barbadilla
genus. ECCB/JBI (2005)
Daniel H. Huson, Tobias H. Klöpper
Computing recombination networks from binary sequences. ECCB/JBI (2005)
José M. Peña, Johan Björkegren, Jesper Tegnér
Growing Bayesian network models of gene networks from seed genes. ECCB/JBI (2005)
Sach Mukherjee, Stephen J. Roberts, Mark J. van der Laan
Data-adaptive test statistics for microarray data. ECCB/JBI (2005)
Walter R. Gilks, Brian D. M. Tom, Alvis Brazma
Fusing microarray experiments with multivariate regression. ECCB/JBI (2005)