Francis J. Doyle III

Publication Activity (10 Years)

Years Active: 1995-2023
Publications (10 Years): 17

Top Topics

Diabetes Mellitus

Sensor Networks

Activity Detection

State Estimation

Top Venues

IEEE Trans. Biomed. Eng.

Publications

Dinesh Krishnamoorthy, Francis J. Doyle III
Safe and Personalized Meal Bolus Calculator for Type-1 Diabetes Using Bayesian Optimization. IEEE Trans. Biomed. Eng. 70 (5) (2023)
Saúl Langarica, Maria Rodriguez-Fernandez, Francis J. Doyle III, Felipe Núñez
A Probabilistic Approach to Blood Glucose Prediction in Type 1 Diabetes Under Meal Uncertainties. IEEE J. Biomed. Health Informatics 27 (10) (2023)
Dinesh Krishnamoorthy, Francis J. Doyle III
Safe Bayesian Optimization using Interior-Point Methods - Applied to Personalized Insulin Dose Guidance. CoRR (2022)
Marzia Cescon, Sunil Deshpande, Revital Nimri, Francis J. Doyle III, Eyal Dassau
Using Iterative Learning for Insulin Dosage Optimization in Multiple-Daily-Injections Therapy for People With Type 1 Diabetes. IEEE Trans. Biomed. Eng. 68 (2) (2021)
Marzia Cescon, Divya Choudhary, Jordan E. Pinsker, Vikash Dadlani, Mei Mei Church, Yogish C. Kudva, Francis J. Doyle III, Eyal Dassau
Activity detection and classification from wristband accelerometer data collected on people with type 1 diabetes in free-living conditions. Comput. Biol. Medicine 135 (2021)
Lukas Ortmann, Dawei Shi, Eyal Dassau, Francis J. Doyle III, Berno J. E. Misgeld, Steffen Leonhardt
Automated Insulin Delivery for Type 1 Diabetes Mellitus Patients using Gaussian Process-based Model Predictive Control. CoRR (2021)
Lindsey S. Brown, Francis J. Doyle III
A dual-feedback loop model of the mammalian circadian clock for multi-input control of circadian phase. PLoS Comput. Biol. 16 (11) (2020)
John H. Abel, Ankush Chakrabarty, Elizabeth B. Klerman, Francis J. Doyle III
Pharmaceutical-based entrainment of circadian phase via nonlinear model predictive control. Autom. 100 (2019)
Lukas Ortmann, Dawei Shi, Eyal Dassau, Francis J. Doyle III, Steffen Leonhardt, Berno J. E. Misgeld
Gaussian Process-Based Model Predictive Control of Blood Glucose for Patients with Type 1 Diabetes Mellitus. CoRR (2017)
Yongqiang Wang, Krishna Mosalakanti, Felipe Núñez, Socrates Deligeorges, Francis J. Doyle III
A kernel module for pulse-coupled time synchronization of sensor networks. Comput. Networks 127 (2017)
Felipe Núñez, Yongqiang Wang, Andrew R. Teel, Francis J. Doyle III
Synchronization of pulse-coupled oscillators to a global pacemaker. Syst. Control. Lett. 88 (2016)
Ravi Gondhalekar, Eyal Dassau, Francis J. Doyle III
Periodic zone-MPC with asymmetric costs for outpatient-ready safety of an artificial pancreas to treat type 1 diabetes. Autom. 71 (2016)
Felipe Núñez, Yongqiang Wang, Francis J. Doyle III
Global synchronization of pulse-coupled oscillators interacting on cycle graphs. Autom. 52 (2015)
Felipe Núñez, Yongqiang Wang, Francis J. Doyle III
Synchronization of Pulse-Coupled Oscillators on (Strongly) Connected Graphs. IEEE Trans. Autom. Control. 60 (6) (2015)
Ravi Gondhalekar, Eyal Dassau, Francis J. Doyle III
Velocity-weighting to prevent controller-induced hypoglycemia in MPC of an artificial pancreas to treat T1DM. ACC (2015)
Peter C. St. John, Francis J. Doyle III
Quantifying Stochastic Noise in Cultured Circadian Reporter Cells. PLoS Comput. Biol. 11 (11) (2015)
Isuru S. Dasanayake, Dale E. Seborg, Jordan E. Pinsker, Francis J. Doyle III, Eyal Dassau
Empirical dynamic model identification for blood-glucose dynamics in response to physical activity. CDC (2015)
Patricio Colmegna, Ricardo S. Sánchez Peña, Ravi Gondhalekar, Eyal Dassau, Francis J. Doyle III
Control. IEEE Trans. Biomed. Eng. 61 (12) (2014)
Yongqiang Wang, Felipe Núñez, Francis J. Doyle III
Mobility induced network evolution speeds up synchronization of wireless sensor networks. ACC (2014)
Justin J. Lee, Eyal Dassau, Howard C. Zisser, Francis J. Doyle III
Design and in silico evaluation of an intraperitoneal-subcutaneous (IP-SC) artificial pancreas. Comput. Chem. Eng. 70 (2014)
Yongqiang Wang, Yutaka Hori, Shinji Hara, Francis J. Doyle III
Collective oscillation period of inter-coupled biological negative cyclic feedback oscillators. CoRR (2014)
Ravi Gondhalekar, Eyal Dassau, Francis J. Doyle III
Moving-horizon-like state estimation via continuous glucose monitor feedback in MPC of an artificial pancreas for type 1 diabetes. CDC (2014)
Felipe Núñez, Yongqiang Wang, Francis J. Doyle III
Global Synchronization of Pulse-Coupled Oscillators Interacting on Cycle Graphs. CoRR (2014)
Ruoting Yang, Bernie J. Daigle Jr., Seid Y. Muhie, Rasha Hammamieh, Marti Jett, Linda R. Petzold, Francis J. Doyle III
Core modular blood and brain biomarkers in social defeat mouse model for post traumatic stress disorder. BMC Syst. Biol. 7 (2013)
Yongqiang Wang, Felipe Núñez, Francis J. Doyle III
Statistical Analysis of the Pulse-Coupled Synchronization Strategy for Wireless Sensor Networks. IEEE Trans. Signal Process. 61 (21) (2013)
Yongqiang Wang, Felipe Núñez, Francis J. Doyle III
Increasing Sync Rate of Pulse-Coupled Oscillators via Phase Response Function Design: Theory and Application to Wireless Networks. IEEE Trans. Control. Syst. Technol. 21 (4) (2013)
Yongqiang Wang, Francis J. Doyle III
Exponential Synchronization Rate of Kuramoto Oscillators in the Presence of a Pacemaker. IEEE Trans. Autom. Control. 58 (4) (2013)
Yongqiang Wang, Francis J. Doyle III
The influence of global cues and local coupling on the rate of synchronization in the presence of time delays. Autom. 49 (6) (2013)
Yongqiang Wang, Yutaka Hori, Shinji Hara, Francis J. Doyle III
The collective oscillation period of inter-coupled Goodwin oscillators CoRR (2012)
Yongqiang Wang, Felipe Núñez, Francis J. Doyle III
Increasing sync rate of pulse-coupled oscillators via phase response function design: theory and application to wireless networks. CoRR (2012)
Alexis B. Webb, Stephanie R. Taylor, Kurt A. Thoroughman, Francis J. Doyle III, Erik D. Herzog
Weakly Circadian Cells Improve Resynchrony. PLoS Comput. Biol. 8 (11) (2012)
Yongqiang Wang, Felipe Núñez, Francis J. Doyle III
Energy-Efficient Pulse-Coupled Synchronization Strategy Design for Wireless Sensor Networks Through Reduced Idle Listening. IEEE Trans. Signal Process. 60 (10) (2012)
Felipe Núñez, Yongqiang Wang, Francis J. Doyle III
Bio-inspired hybrid control of pulse-coupled oscillators and application to synchronization of a wireless network. ACC (2012)
Yongqiang Wang, Francis J. Doyle III
Exponential synchronization rate of Kuramoto oscillators in the presence of a pacemaker CoRR (2012)
Klaske van Heusden, Eyal Dassau, Howard C. Zisser, Dale E. Seborg, Francis J. Doyle III
Control-Relevant Models for Glucose Control Using A Priori Patient Characteristics. IEEE Trans. Biomed. Eng. 59 (7) (2012)
K. Sriram, Maria Rodriguez-Fernandez, Francis J. Doyle III
Modeling Cortisol Dynamics in the Neuro-endocrine Axis Distinguishes Normal, Depression, and Post-traumatic Stress Disorder (PTSD) in Humans. PLoS Comput. Biol. 8 (2) (2012)
Yongqiang Wang, Yutaka Hori, Shinji Hara, Francis J. Doyle III
The collective oscillation period of inter-coupled Goodwin oscillators. CDC (2012)
Yongqiang Wang, Francis J. Doyle III
Optimal Phase Response Functions for Fast Pulse-Coupled Synchronization in Wireless Sensor Networks. IEEE Trans. Signal Process. 60 (10) (2012)
Stephen D. Patek, Lalo Magni, Eyal Dassau, Christopher W. Karvetski, Chiara Toffanin, Giuseppe De Nicolao, Simone Del Favero, Marc D. Breton, Chiara Dalla Man, Elisabeth Renard, Howard C. Zisser, Francis J. Doyle III, Claudio Cobelli, Boris P. Kovatchev
Modular Closed-Loop Control of Diabetes. IEEE Trans. Biomed. Eng. 59 (11-1) (2012)
Ruoting Yang, Bernie J. Daigle Jr., Linda R. Petzold, Francis J. Doyle III
Core module biomarker identification with network exploration for breast cancer metastasis. BMC Bioinform. 13 (2012)
Yongqiang Wang, Francis J. Doyle III
On influences of global and local cues on the rate of synchronization of oscillator networks. Autom. 47 (6) (2011)
Ruoting Yang, K. Sriram, Francis J. Doyle III
Control circuitry for fear conditioning associated with Post-Traumatic Stress Disorder (PTSD). CDC (2010)
Theresa M. Yuraszeck, Pierre Neveu, Maria Rodriguez-Fernandez, Anne S. Robinson, Kenneth S. Kosik, Francis J. Doyle III
Vulnerabilities in the Tau Network and the Role of Ultrasensitive Points in Tau Pathophysiology. PLoS Comput. Biol. 6 (11) (2010)
Youqing Wang, Eyal Dassau, Francis J. Doyle III
Closed-Loop Control of Artificial Pancreatic Beta -Cell in Type 1 Diabetes Mellitus Using Model Predictive Iterative Learning Control. IEEE Trans. Biomed. Eng. 57 (2) (2010)
Yongqiang Wang, Francis J. Doyle III
The influences of global and local cues on the synchronization rate of interconnected oscillator networks subject to time delays. CDC (2010)
Camilla Luni, Jason E. Shoemaker, Kevin R. Sanft, Linda R. Petzold, Francis J. Doyle III
Confidence from uncertainty - A multi-target drug screening method from robust control theory. BMC Syst. Biol. 4 (2010)
Youqing Wang, Francis J. Doyle III
Stability analysis for set-point-related indirect iterative learning control. CDC (2009)
Stephanie R. Taylor, Rudiyanto Gunawan, Linda R. Petzold, Francis J. Doyle III
Sensitivity Measures for Oscillating Systems: Application to Mammalian Circadian Gene Network. IEEE Trans. Autom. Control. 53 (2008)
Mehmet Mercangöz, Francis J. Doyle III
Real-time optimization of the pulp mill benchmark problem. Comput. Chem. Eng. 32 (4-5) (2008)
Neda Bagheri, Jörg Stelling, Francis J. Doyle III
Circadian Phase Resetting via Single and Multiple Control Targets. PLoS Comput. Biol. 4 (7) (2008)
Mark A. Pinto, Charles D. Immanuel, Francis J. Doyle III
A feasible solution technique for higher-dimensional population balance models. Comput. Chem. Eng. 31 (10) (2007)
Neda Bagheri, Jörg Stelling, Francis J. Doyle III
Quantitative performance metrics for robustness in circadian rhythms. Bioinform. 23 (3) (2007)
Camelia Owens, Howard C. Zisser, Lois Jovanovic, Bala Srinivasan, Dominique Bonvin, Francis J. Doyle III
Run-to-run control of blood glucose concentrations for people with type 1 diabetes mellitus. IEEE Trans. Biomed. Eng. 53 (6) (2006)
Kapil G. Gadkar, Radhakrishnan Mahadevan, Francis J. Doyle III
Optimal genetic manipulations in batch bioreactor control. Autom. 42 (10) (2006)
Francis J. Doyle III, Rudiyanto Gunawan, Neda Bagheri, Henry Mirsky, Tsz Leung To
Circadian rhythm: A natural, robust, multi-scale control system. Comput. Chem. Eng. 30 (10-12) (2006)
Francis J. Doyle III
Editorial. IEEE Trans. Control. Syst. Technol. 14 (1) (2006)
Daniel E. Zak, Jörg Stelling, Francis J. Doyle III
Sensitivity analysis of oscillatory (bio)chemical systems. Comput. Chem. Eng. 29 (3) (2005)
Kapil G. Gadkar, Rudiyanto Gunawan, Francis J. Doyle III
Iterative approach to model identification of biological networks. BMC Bioinform. 6 (2005)
Francis J. Doyle III
Editorial. IEEE Trans. Control. Syst. Technol. 13 (1) (2005)
Rudiyanto Gunawan, Francis J. Doyle III
Phase Sensitivity Analysis of a Circadian Rhythm Gene Network. CDC/ECC (2005)
Francis J. Doyle III
Editorial New Online Submission Procedure. IEEE Trans. Control. Syst. Technol. 13 (5) (2005)
Daniel E. Zak, Rajanikanth Vadigepalli, Gregory E. Gonye, Francis J. Doyle III, James S. Schwaber, Babatunde A. Ogunnaike
Unconventional systems analysis problems in molecular biology: a case study in gene regulatory network modeling. Comput. Chem. Eng. 29 (3) (2005)
Kapil G. Gadkar, Radhakrishnan Mahadevan, Francis J. Doyle III
Batch control of genetic alterations for optimal metabolic engineering. ACC (2005)
Daniel R. Saffer II, Francis J. Doyle III
Analysis of linear programming in model predictive control. Comput. Chem. Eng. 28 (12) (2004)
Yang Wang, Charles D. Immanuel, Francis J. Doyle III
Reachability of particle size distribution in emulsion batch polymerization under mid-course correction policies. ACC (2003)
Kapil G. Gadkar, Francis J. Doyle III
Nonlinear metabolic model-based control of ethanol in Escherichia Coli. ACC (2003)
Francis J. Doyle III, Christopher A. Harrison, Timothy J. Crowley
Hybrid model-based approach to batch-to-batch control of particle size distribution in emulsion polymerization. Comput. Chem. Eng. 27 (8-9) (2003)
Rajanikanth Vadigepalli, Francis J. Doyle III
A distributed state estimation and control algorithm for plantwide processes. IEEE Trans. Control. Syst. Technol. 11 (1) (2003)
Charles D. Immanuel, Francis J. Doyle III
Tracking of a reference particle size distribution trajectory in semi-batch emulsion polymerization. ACC (2002)
Philip A. Wisnewski, Francis J. Doyle III
Model-based predictive control studies for a continuous pulp digester. IEEE Trans. Control. Syst. Technol. 9 (3) (2001)
Rajanikanth Vadigepalli, Francis J. Doyle III, James S. Schwaber
Analysis and Neuronal Modeling of the Nonlinear Characteristics of a Local Cardiac Reflex in the Rat. Neural Comput. 13 (10) (2001)
Timothy J. Crowley, Christopher A. Harrison, Francis J. Doyle III
Batch-to-batch optimization of PSD in emulsion polymerization using a hybrid model. ACC (2001)
Daniel E. Zak, Francis J. Doyle III, Dionisios G. Vlachos, James S. Schwaber
Stochastic kinetic analysis of transcriptional feedback models for circadian rhythms. CDC (2001)
Charles D. Immanuel, Francis J. Doyle III, Cajetan F. Cordeiro
Experimental studies of the sensitivity of particle size distribution in emulsion co-polymerization. ACC (2001)
Francis J. Doyle III
Use of the World Wide Web for distance education in a process control course. ACC (2000)
Alan W. Mahoney, Francis J. Doyle III, Doraiswami Ramkrishna
Inverse problem approach to modeling of particulate systems. ACC (2000)
Francis J. Doyle III, R. S. Parker, Ronald K. Pearson, Babatunde A. Ogunnaike
Plant-friendly identification of second-order Volterra models. ECC (1999)
Robert S. Parker, Francis J. Doyle III, Nicholas A. Peppas
A model-based algorithm for blood glucose control in Type I diabetic patients. IEEE Trans. Biomed. Eng. 46 (2) (1999)
Harpreet S. Kwatra, Francis J. Doyle III, Ilya A. Rybak, James S. Schwaber
A Neuro-Mimetic Dynamic Scheduling Algorithm for Control: Analysis and Applications. Neural Comput. 9 (3) (1997)
Francis J. Doyle III, Frank Allgöwer, Manfred Morari
A normal form approach to approximate input-output linearization for maximum phase nonlinear SISO systems. IEEE Trans. Autom. Control. 41 (2) (1996)
Ronald K. Pearson, Babatunde A. Ogunnaike, Francis J. Doyle III
Identification of structurally constrained second-order Volterra models. IEEE Trans. Signal Process. 44 (11) (1996)
Bryon R. Maner, Francis J. Doyle III, Babatunde A. Ogunnaike, Ronald K. Pearson
Nonlinear model predictive control of a simulated multivariable polymerization reactor using second-order Volterra models. Autom. 32 (9) (1996)
Francis J. Doyle III, Babatunde A. Ogunnaike, Ronald K. Pearson
Nonlinear model-based control using second-order Volterra models. Autom. 31 (5) (1995)