Carol Friedman

Publication Activity (10 Years)

Years Active: 1982-2019
Publications (10 Years): 12

Top Venues

AMIA

J. Am. Medical Informatics Assoc.

J. Biomed. Informatics

BMC Medical Informatics Decis. Mak.

Publications

Chunhua Weng, Carol Friedman, Casey A. Rommel, John F. Hurdle
A two-site survey of medical center personnel's willingness to share clinical data for research: implications for reproducible health NLP research. BMC Medical Informatics Decis. Mak. (3) (2019)
Cong Liu, Casey N. Ta, James R. Rogers, Ziran Li, Junghwan Lee, Alex M. Butler, Ning Shang, Fabricio Sampaio Peres Kury, Liwei Wang, Feichen Shen, Hongfang Liu, Lyudmila Ena, Carol Friedman, Chunhua Weng
Ensembles of natural language processing systems for portable phenotyping solutions. J. Biomed. Informatics 100 (2019)
Chunhua Weng, Tianyong Hao, Carol Friedman, John F. Hurdle
Crowdsourcing Public Opinion for Sharing Medical Records for the Advancement of Science. MedInfo (2019)
Chunhua Weng, Carol Friedman, Casey A. Rommel, John F. Hurdle
A Two-Site Survey of Medical Center Personnel's Willingness to Share Clinical Data for Research: Implications for Reproducible Health NLP Research. ICHI Workshops (2018)
Santiago Vilar, Carol Friedman, George Hripcsak
Detection of drug-drug interactions through data mining studies using clinical sources, scientific literature and social media. Briefings Bioinform. 19 (5) (2018)
William Ogallo, Carol Friedman, Andrew S. Kanter
Validation of the Behavior of a Knowledge Base Implementing Clinical Guidelines for Point-of-Care Antiretroviral Toxicity Monitoring. AMIA (2018)
Daniel Backenroth, Herbert S. Chase, Ying Wei, Carol Friedman
Monitoring prescribing patterns using regression and electronic health records. BMC Medical Informatics Decis. Mak. 17 (1) (2017)
Rave Harpaz, William DuMouchel, Martijn J. Schuemie, Olivier Bodenreider, Carol Friedman, Eric Horvitz, Anna Ripple, Alfred Sorbello, Ryen W. White, Rainer Winnenburg, Nigam H. Shah
Toward multimodal signal detection of adverse drug reactions. J. Biomed. Informatics 76 (2017)
Robert Moskovitch, Fei Wang, Jian Pei, Carol Friedman
special issue on biomedical information retrieval. J. Assoc. Inf. Sci. Technol. 68 (11) (2017)
Luoxin Chen, Carol Friedman, Joseph Finkelstein
Automated Metabolic Phenotyping of Cytochrome Polymorphisms Using PubMed Abstract Mining. AMIA (2017)
Joseph Finkelstein, Qinlang Chen, Hayden Z. Adams, Carol Friedman
Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed. CRI (2016)
Kuo Lin, Carol Friedman, Joseph Finkelstein
An Automated System for Retrieving Herb-drug Interaction Related Articles from MEDLINE. CRI (2016)
Evelyn Rustia, Chunhua Weng, Carol Friedman
Representation of Genetic Variants in Genomic Sequencing Reports. AMIA (2015)
Hojjat Salmasian, Carol Friedman
MAC Annotator: An interactive tool for translating medication appropriateness criteria into structured form. AMIA (2015)
Hojjat Salmasian, Tran H. Tran, Herbert S. Chase, Carol Friedman
Medication-indication knowledge bases: a systematic review and critical appraisal. J. Am. Medical Informatics Assoc. 22 (6) (2015)
Joseph Finkelstein, Hayden Z. Adams, Qinlang Chen, Kuo Lin, Carol Friedman
Implementing automated delivery of evidence-based medication safety information to the point of care. AMIA (2015)
Hua Xu, Melinda C. Aldrich, Qingxia Chen, Hongfang Liu, Neeraja B. Peterson, Qi Dai, Mia A. Levy, Anushi Shah, Han Xue, Xiaoyang Ruan, Min Jiang, Ying Li, Jamii St Julien, Jeremy L. Warner, Carol Friedman, Dan M. Roden, Joshua C. Denny
Validating drug repurposing signals using electronic health records: a case study of metformin associated with reduced cancer mortality. J. Am. Medical Informatics Assoc. 22 (1) (2015)
Ying Li, Santiago Vilar, Ying Wei, Carol Friedman
Combining Heterogeneous Databases to Detect Adverse Drug Reaction. AMIA (2014)
Sivan Kinberg, Lyudmila Ena, Herbert S. Chase, Carol Friedman
Identification of Inflammatory Bowel Disease Patients with Steroid-induced Diabetes Mellitus Using an Electronic Health Record. AMIA (2014)
Ying Li, Hojjat Salmasian, Santiago Vilar, Herbert S. Chase, Carol Friedman, Ying Wei
A method for controlling complex confounding effects in the detection of adverse drug reactions using electronic health records. J. Am. Medical Informatics Assoc. 21 (2) (2014)
Hojjat Salmasian, Tran H. Tran, Carol Friedman
Developing a Formal Representation for Medication Appropriateness Criteria. AMIA (2014)
Barbara Di Eugenio, Camillo Lugaresi, Gail M. Keenan, Yves A. Lussier, Jianrong Li, Mike D. Burton, Carol Friedman, Andrew D. Boyd
HospSum: Integrating physician discharge notes with coded nursing care data to generate patient-centric summaries. AMIA (2013)
Rave Harpaz, Santiago Vilar, William DuMouchel, Hojjat Salmasian, Krystl Haerian, Nigam H. Shah, Herbert S. Chase, Carol Friedman
Combing signals from spontaneous reports and electronic health records for detection of adverse drug reactions. J. Am. Medical Informatics Assoc. 20 (3) (2013)
Hojjat Salmasian, Daniel Freedberg, Carol Friedman
Deriving comorbidities from medical records using Natural Language Processing. AMIA (2013)
Carol Friedman, Thomas C. Rindflesch, Milton Corn
Natural language processing: State of the art and prospects for significant progress, a workshop sponsored by the National Library of Medicine. J. Biomed. Informatics 46 (5) (2013)
Santiago Vilar, Rave Harpaz, Eugenio Uriarte, Lourdes Santana, Raul Rabadan, Carol Friedman
Drug-drug interaction through molecular structure similarity analysis. J. Am. Medical Informatics Assoc. 19 (6) (2012)
Hua Xu, Peter D. Stetson, Carol Friedman
Combining Corpus-derived Sense Profiles with Estimated Frequency Information to Disambiguate Clinical Abbreviations. AMIA (2012)
Hua Xu, Melinda Aldrich, Qingxia Chen, Neeraja B. Peterson, Qi Dai, Mia A. Levy, Anushi Shah, Han Xue, Ying Li, Carol Friedman, Hongfang Liu, Joshua C. Denny
Electronic health record data suggests metformin improves cancer survival: A new model for drug repurposing studies. AMIA (2012)
Hojjat Salmasian, Julian Abrams, Daniel Freedberg, Carol Friedman
Identifying overuse of medications using natural language processing and electronic health records. AMIA (2012)
Krystl Haerian, Hojjat Salmasian, Carol Friedman
Methods for Identifying Suicide or Suicidal Ideation in EHRs. AMIA (2012)
Hua Xu, Yonghui Wu, Noemie Elhadad, Peter D. Stetson, Carol Friedman
A new clustering method for detecting rare senses of abbreviations in clinical notes. J. Biomed. Informatics 45 (6) (2012)
Jung-Wei Fan, Carol Friedman
Deriving a probabilistic syntacto-semantic grammar for biomedicine based on domain-specific terminologies. J. Biomed. Informatics 44 (5) (2011)
Santiago Vilar, Rave Harpaz, Herbert S. Chase, Stefano Costanzi, Raul Rabadan, Carol Friedman
Facilitating adverse drug event detection in pharmacovigilance databases using molecular structure similarity: application to rhabdomyolysis. J. Am. Medical Informatics Assoc. 18 (Supplement) (2011)
Rave Harpaz, Krystl Haerian, Herbert S. Chase, Carol Friedman
Mining electronic health records for adverse drug effects using regression based methods. IHI (2010)
Rave Harpaz, Herbert S. Chase, Carol Friedman
Mining multi-item drug adverse effect associations in spontaneous reporting systems. BMC Bioinform. 11 (S-9) (2010)
Xiaoyan Wang, Herbert S. Chase, Marianthi Markatou, George Hripcsak, Carol Friedman
Selecting information in electronic health records for knowledge acquisition. J. Biomed. Informatics 43 (4) (2010)
Xiaoyan Wang, George Hripcsak, Carol Friedman
Characterizing environmental and phenotypic associations using information theory and electronic health records. BMC Bioinform. 10 (S-9) (2009)
Lee T. Sam, Eneida A. Mendonça, Jianrong Li, Judith A. Blake, Carol Friedman, Yves A. Lussier
PhenoGO: an integrated resource for the multiscale mining of clinical and biological data. BMC Bioinform. 10 (S-2) (2009)
Carol Friedman
Discovering Novel Adverse Drug Events Using Natural Language Processing and Mining of the Electronic Health Record. AIME (2009)
Xiaoyan Wang, George Hripcsak, Marianthi Markatou, Carol Friedman
Research Paper: Active Computerized Pharmacovigilance Using Natural Language Processing, Statistics, and Electronic Health Records: A Feasibility Study. J. Am. Medical Informatics Assoc. 16 (3) (2009)
Hua Xu, Peter D. Stetson, Carol Friedman
Research Paper: Methods for Building Sense Inventories of Abbreviations in Clinical Notes. J. Am. Medical Informatics Assoc. 16 (1) (2009)
Jung-Wei Fan, Carol Friedman
Generating quality word sense disambiguation test sets based on MeSH indexing. AMIA (2009)
George Hripcsak, Nicholas D. Soulakis, Li Li, Frances P. Morrison, Albert M. Lai, Carol Friedman, Neil S. Calman, Farzad Mostashari
Research Paper: Syndromic Surveillance Using Ambulatory Electronic Health Records. J. Am. Medical Informatics Assoc. 16 (3) (2009)
Elizabeth S. Chen, George Hripcsak, Hua Xu, Marianthi Markatou, Carol Friedman
Research Paper: Automated Acquisition of Disease-Drug Knowledge from Biomedical and Clinical Documents: An Initial Study. J. Am. Medical Informatics Assoc. 15 (1) (2008)
Jung-Wei Fan, Carol Friedman
Word Sense Disambiguation via Semantic Type Classification. AMIA (2008)
Hua Xu, Peter D. Stetson, Carol Friedman
Methods for Building Sense Inventories of Abbreviations in Clinical Notes. AMIA (2008)
Xiaoyan Wang, Amy E. Chused, Noémie Elhadad, Carol Friedman, Marianthi Markatou
Automated Knowledge Acquisition from Clinical Narrative Reports. AMIA (2008)
Li Li, Herbert S. Chase, Chintan Patel, Carol Friedman, Chunhua Weng
Comparing ICD9-Encoded Diagnoses and NLP-Processed Discharge Summaries for Clinical Trials Pre-Screening: A Case Study. AMIA (2008)
Jung-Wei Fan, Carol Friedman
Semantic reclassification of the UMLS concepts. Bioinform. 24 (17) (2008)
Hua Xu, Jung-Wei Fan, Carol Friedman
Combining multiple evidence for gene symbol disambiguation. BioNLP@ACL (2007)
Elizabeth S. Chen, Peter D. Stetson, Yves A. Lussier, Marianthi Markatou, George Hripcsak, Carol Friedman
Detection of Practice Pattern Trends through Natural Language Processing of Clinical Narratives and Biomedical Literature. AMIA (2007)
Jung-Wei Fan, Hua Xu, Carol Friedman
Using Distributional Analysis to Semantically Classify UMLS Concepts. MedInfo (2007)
Jung-Wei Fan, Hua Xu, Carol Friedman
Using contextual and lexical features to restructure and validate the classification of biomedical concepts. BMC Bioinform. 8 (2007)
Hua Xu, Jung-Wei Fan, George Hripcsak, Eneida A. Mendonça, Marianthi Markatou, Carol Friedman
Gene symbol disambiguation using knowledge-based profiles. Bioinform. 23 (8) (2007)
Jung-Wei Fan, Carol Friedman
Combining Contextual and Lexical Features to Classify UMLS Concepts. AMIA (2007)
P. Karina Tulipano, Ying Tao, William S. Millar, Pat Zanzonico, Katherine Kolbert, Hua Xu, Hong Yu, Lifeng Chen, Yves A. Lussier, Carol Friedman
Natural language processing and visualization in the molecular imaging domain. J. Biomed. Informatics 40 (3) (2007)
Jung-Wei Fan, Carol Friedman
Research Paper: Semantic Classification of Biomedical Concepts Using Distributional Similarity. J. Am. Medical Informatics Assoc. 14 (4) (2007)
Hua Xu, Peter D. Stetson, Carol Friedman
A Study of Abbreviations in Clinical Notes. AMIA (2007)
Lee T. Sam, Yang Liu, Jianrong Li, Carol Friedman, Yves A. Lussier
Discovery of Protein Interaction Networks Shared by Diseases. Pacific Symposium on Biocomputing (2007)
Ying Tao, Lee T. Sam, Jianrong Li, Carol Friedman, Yves A. Lussier
Information theory applied to the sparse gene ontology annotation network to predict novel gene function. ISMB/ECCB (Supplement of Bioinformatics) (2007)
Lee T. Sam, Tara Borlawsky, Ying Tao, Jianrong Li, Carol Friedman, Barry Smith, Yves A. Lussier
Information-Theoretic Classification of SNOMED Improves the Organization of Context-Sensitive Excerpts from Cochrane Reviews. AMIA (2007)
Rita Kukafka, Michael E. Bales, Ann Burkhardt, Carol Friedman
Research Paper: Human and Automated Coding of Rehabilitation Discharge Summaries According to the International Classification of Functioning, Disability, and Health. J. Am. Medical Informatics Assoc. 13 (5) (2006)
Carol Friedman, Tara Borlawsky, Lyudmila Shagina, H. Rosie Xing, Yves A. Lussier
Bio-Ontology and text: bridging the modeling gap. Bioinform. 22 (19) (2006)
Yves A. Lussier, Tara Borlawsky, Daniel Rappaport, Yang Liu, Carol Friedman
PhenoGO: Assigning Phenotypic Context to Gene Ontology Annotations with Natural Language Processing. Pacific Symposium on Biocomputing (2006)
Elizabeth S. Chen, George Hripcsak, Carol Friedman
Disseminating Natural Language Processed Clinical Narratives. AMIA (2006)
Ying Tao, Chintan Patel, Carol Friedman, Yves A. Lussier
Issues in Representing Biological and Clinical Phenotypes Using the Formal Models. KR-MED (2006)
Dimitar Hristovski, Carol Friedman, Thomas C. Rindflesch, Borut Peterlin
Exploiting Semantic Relations for Literature-Based Discovery. AMIA (2006)
Hua Xu, Debra M. Krupke, Judith A. Blake, Carol Friedman
A Natural Language Processing (NLP) Tool to Assist in the Curation Of the Laboratory Mouse Tumor Biology Database. AMIA (2006)
Eric Silfen, Chintan Patel, Eneida A. Mendonça, Carol Friedman
ZebraHunter: Searching Rare Medical Diagnoses and Retrieving Relevant Citations. AMIA (2006)
Michael E. Bales, Rita Kukafka, Ann Burkhardt, Carol Friedman
Qualitative assessment of the International Classification of Functioning, Disability, and Health with respect to the desiderata for controlled medical vocabularies. Int. J. Medical Informatics 75 (5) (2006)
Tara Borlawsky, Carol Friedman, Yves A. Lussier
Generating Executable Knowledge for Evidence-Based Medicine Using Natural Language and Semantic Processing. AMIA (2006)
Hongfang Liu, Zhang-Zhi Hu, Manabu Torii, Cathy H. Wu, Carol Friedman
Research Paper: Quantitative Assessment of Dictionary-based Protein Named Entity Tagging. J. Am. Medical Informatics Assoc. 13 (5) (2006)
Li Zhou, Ying Tao, James J. Cimino, Elizabeth S. Chen, Hongfang Liu, Yves A. Lussier, George Hripcsak, Carol Friedman
Terminology model discovery using natural language processing and visualization techniques. J. Biomed. Informatics 39 (6) (2006)
Hua Xu, Marianthi Markatou, Rositsa Dimova, Hongfang Liu, Carol Friedman
Machine learning and word sense disambiguation in the biomedical domain: design and evaluation issues. BMC Bioinform. 7 (2006)
Lifeng Chen, Hongfang Liu, Carol Friedman
Gene name ambiguity of eukaryotic nomenclatures. Bioinform. 21 (2) (2005)
Eneida A. Mendonça, Janet Haas, Lyudmila Shagina, Elaine Larson, Carol Friedman
Extracting information on pneumonia in infants using natural language processing of radiology reports. J. Biomed. Informatics 38 (4) (2005)
P. Karina Tulipano, Ying Tao, Pat Zanzonico, Katherine Kolbert, Yves A. Lussier, Carol Friedman
Natural Language Processing in the Molecular Imaging Domain. AMIA (2005)
Li Zhou, Carol Friedman, Simon Parsons, George Hripcsak
System Architecture for Temporal Information Extraction, Representationand Reasoning in Clinical Narrative Reports. AMIA (2005)
Suzanne Bakken, Sookyung Hyun, Carol Friedman, Stephen B. Johnson
ISO reference terminology models for nursing: Applicability for natural language processing of nursing narratives. Int. J. Medical Informatics 74 (7-8) (2005)
Ying Tao, Carol Friedman, Yves A. Lussier
Visualizing information across multidimensional post-genomic structured and textual databases. Bioinform. 21 (8) (2005)
Michael E. Bales, Rita Kukafka, Ann Burkhardt, Carol Friedman
Extending a Medical Language Processing System to the Functional Status Domain. AMIA (2005)
Hua Xu, Kristin Anderson, Victor R. Grann, Carol Friedman
Facilitating Cancer Research using Natural Language Processing of Pathology Reports. MedInfo (2004)
Olivia Tuason, Lifeng Chen, Hongfang Liu, Judith A. Blake, Carol Friedman
Biological Nomenclatures: A Source of Lexical Knowledge and Ambiguity. Pacific Symposium on Biocomputing (2004)
Hongfang Liu, Carol Friedman
CliniViewer: A Tool for Viewing Electronic Medical Records Based on Natural Language Processing and XML. MedInfo (2004)
Carol Friedman, Lyudmila Shagina, Yves A. Lussier, George Hripcsak
Research Paper: Automated Encoding of Clinical Documents Based on Natural Language Processing. J. Am. Medical Informatics Assoc. 11 (5) (2004)
Hongfang Liu, Virginia Teller, Carol Friedman
Research Paper: A Multi-aspect Comparison Study of Supervised Word Sense Disambiguation. J. Am. Medical Informatics Assoc. 11 (4) (2004)
Ivan Iossifov, Michael Krauthammer, Carol Friedman, Vasileios Hatzivassiloglou, Joel S. Bader, Kevin P. White, Andrey Rzhetsky
Probabilistic inference of molecular networks from noisy data sources. Bioinform. 20 (8) (2004)
Sophia Ananiadou, Carol Friedman, Jun'ichi Tsujii
Introduction: named entity recognition in biomedicine. J. Biomed. Informatics 37 (6) (2004)
Lifeng Chen, Carol Friedman
Extracting Phenotypic Information from the Literature via Natural Language Processing. MedInfo (2004)
Suzanne Bakken, Sookyung Hyun, Carol Friedman, Stephen B. Johnson
A Comparison of Semantic Categories of the ISO Reference Terminology Models for Nursing and the MedLEE Natural Language Processing System. MedInfo (2004)
Hua Xu, Carol Friedman
Facilitating Research in Pathology using Natural Language Processing. AMIA (2003)
Stephen B. Johnson, David A. Campbell, Michael Krauthammer, P. Karina Tulipano, Eneida A. Mendonça, Carol Friedman, George Hripcsak
A Native XML Database Design for Clinical Document Research. AMIA (2003)
Eneida A. Mendonça, Janet Haas, Lyudmila Shagina, Elaine Larson, Carol Friedman
Extracting Information on Pneumonia in Infants Using Natural Language Processing of Radiology Reports. BioNLP@ACL (2003)
Hongfang Liu, Carol Friedman
Mining Terminological Knowledge in Large Biomedical Corpora. Pacific Symposium on Biocomputing (2003)
Lynette Hirschman, Carol Friedman, Robin McEntire, Cathy H. Wu
Linking Biomedical Language, Information and Knowledge - Session Introduction. Pacific Symposium on Biocomputing (2003)
Sookyung Hyun, Suzanne Bakken, Carol Friedman, Stephen B. Johnson
Natural Language Processing Challenges in HIV/AIDS Clinic Notes. AMIA (2003)
Carol Friedman, Hongfang Liu, Lyudmila Shagina
A vocabulary development and visualization tool based on natural language processing and the mining of textual patient reports. J. Biomed. Informatics 36 (3) (2003)
Michael Krauthammer, Pauline Kra, Ivan Iossifov, Shawn M. Gomez, George Hripcsak, Vasileios Hatzivassiloglou, Carol Friedman, Andrey Rzhetsky
Of truth and pathways: chasing bits of information through myriads of articles. ISMB (2002)
Hongfang Liu, Alan R. Aronson, Carol Friedman
A study of abbreviations in MEDLINE abstracts. AMIA (2002)
Carol Friedman, Pauline Kra, Andrey Rzhetsky
Two biomedical sublanguages: a description based on the theories of Zellig Harris. J. Biomed. Informatics 35 (4) (2002)

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Publication Activity (10 Years)

Top Topics

Top Venues

Carol Friedman