Alexandre Almeida

Publication Activity (10 Years)

Years Active: 2016-2023
Publications (10 Years): 14

Top Topics

Outlier Detection

Profile Hidden Markov Models

Detect Outliers

Top Venues

Nucleic Acids Res.

Publications

Guillermo Rangel-Pineros, Alexandre Almeida, Martin Beracochea, Ekaterina A. Sakharova, Manja Marz, Alejandro Reyes, Martin Hölzer, Robert D. Finn
VIRify: An integrated detection, annotation and taxonomic classification pipeline using virus-specific protein profile hidden Markov models. PLoS Comput. Biol. 19 (8) (2023)
Inês Saraiva, Daniela Moniz, Alexandre Almeida, João Sousa, Susana Vieira
Intelligent Funds Assistant Exploiting Hierarchical Text Classification Algorithms. IJCNN (2022)
Alexandre Almeida, Telma Woerle de Lima
A Hybrid Predictor for Protein Tertiary Structures. IntelliSys (2) (2022)
Alexandre Almeida, Pedro Vicente, Alexandre Bernardino
Where is my hand? Deep hand segmentation for visual self-recognition in humanoid robots. CoRR (2021)
Franziska Hufsky, Kevin Lamkiewicz, Alexandre Almeida, Abdel Aouacheria, Cecilia N. Arighi, Alex Bateman, Jan Baumbach, Niko Beerenwinkel, Christian Brandt, Marco Cacciabue, Sara Chuguransky, Oliver Drechsel, Robert D. Finn, Adrian Fritz, Stephan Fuchs, Georges Hattab, Anne-Christin Hauschild, Dominik Heider, Marie Hoffmann, Martin Hölzer, Stefan Hoops, Lars Kaderali, Ioanna Kalvari, Max von Kleist, Renó Kmiecinski, Denise Kühnert, Gorka Lasso, Pieter Libin, Markus List, Hannah F. Löchel, Maria Jesus Martin, Roman Martin, Julian O. Matschinske, Alice C. McHardy, Pedro Mendes, Jaina Mistry, Vincent Navratil, Eric P. Nawrocki, Áine Niamh O'toole, Nancy Ontiveros-Palacios, Anton I. Petrov, Guillermo Rangel-Pineros, Nicole Redaschi, Susanne Reimering, Knut Reinert, Alejandro Reyes, Lorna J. Richardson, David L. Robertson, Sepideh Sadegh, Joshua B. Singer, Kristof Theys, Chris Upton, Marius Welzel, Lowri Williams, Manja Marz
Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research. Briefings Bioinform. 22 (2) (2021)
Alexandre Almeida, Pedro Vicente, Alexandre Bernardino
Where is my hand? Deep hand segmentation for visual self-recognition in humanoid robots. Robotics Auton. Syst. 145 (2021)
Alex L. Mitchell, Alexandre Almeida, Martin Beracochea, Miguel A. Boland, Josephine Burgin, Guy Cochrane, Michael R. Crusoe, Varsha Kale, Simon C. Potter, Lorna J. Richardson, Ekaterina A. Sakharova, Maxim Scheremetjew, Anton I. Korobeynikov, Alexander Shlemov, Olga Kunyavskaya, Alla L. Lapidus, Robert D. Finn
MGnify: the microbiome analysis resource in 2020. Nucleic Acids Res. 48 (Database-Issue) (2020)
Pedro Lima, Caio Vieira, Jorge Reis, Alexandre Almeida, Jarbas Silveira, Roger C. Goerl, César A. M. Marcon
Optimizing RISC-V ISA Usage by Sharing Coprocessors on MPSoC. LATS (2020)
Lorna J. Richardson, Neil D. Rawlings, Gustavo A. Salazar, Alexandre Almeida, David Haft, Gregory Ducq, Granger G. Sutton, Robert D. Finn
Genome properties in 2019: a new companion database to InterPro for the inference of complete functional attributes. Nucleic Acids Res. 47 (Database-Issue) (2019)
Alexandre Almeida, Ana Alves, Rui Gomes
Automatic POI Matching Using an Outlier Detection Based Approach. IDA (2018)
Alexandre Almeida, Adam Loy, Heike Hofmann
ggplot2 Compatible Quantile-Quantile Plots in R. R J. 10 (2) (2018)
Alexandre Almeida, Ana Alves
Activity recognition for movement-based interaction in mobile games. MobileHCI (2017)
Bruno Dantas, Calmenelias Fleitas, Alexandre Almeida, João Forja, Alexandre P. Francisco, José Simão, Cátia Vaz
NGSPipes: Fostering Reproducibility and Scalability in Biosciences. BCB (2017)
Christoforos Kachris, Dimitrios Soudris, Georgi Gaydadjiev, Huy-Nam Nguyen, Dimitrios S. Nikolopoulos, Angelos Bilas, Neil Morgan, Christos Strydis, Christos Tsalidis, John Balafas, Ricardo Jiménez-Peris, Alexandre Almeida
The VINEYARD Approach: Versatile, Integrated, Accelerator-Based, Heterogeneous Data Centres. ARC (2016)