Granger G. Sutton

Publication Activity (10 Years)

Years Active: 2001-2022
Publications (10 Years): 9

Top Topics

Representative Set

Comparative Analysis

Protein Classification

Top Venues

Nucleic Acids Res.

Publications

Gary B. Fogel, Enoch S. Liu, Brad Abramson, Semar Petrus, Tyler Barrus, Granger G. Sutton, Todd Michael, Sterling Thomas
Identification of Synthetic Engineering in Prokaryotic Genomes Using Evolved Neural Networks. CIBCB (2022)
Lorna J. Richardson, Neil D. Rawlings, Gustavo A. Salazar, Alexandre Almeida, David Haft, Gregory Ducq, Granger G. Sutton, Robert D. Finn
Genome properties in 2019: a new companion database to InterPro for the inference of complete functional attributes. Nucleic Acids Res. 47 (Database-Issue) (2019)
Jason M. Inman, Granger G. Sutton, Erin Beck, Lauren M. Brinkac, Thomas H. Clarke, Derrick E. Fouts
Large-scale comparative analysis of microbial pan-genomes using PanOCT. Bioinform. 35 (6) (2019)
Alex L. Mitchell, Teresa K. Attwood, Patricia C. Babbitt, Matthias Blum, Peer Bork, Alan Bridge, Shoshana D. Brown, Hsin-Yu Chang, Sara El-Gebali, Matthew Fraser, Julian Gough, David Haft, Hongzhan Huang, Ivica Letunic, Rodrigo Lopez, Aurelien Luciani, Fábio Madeira, Aron Marchler-Bauer, Huaiyu Mi, Darren A. Natale, Marco Necci, Gift Nuka, Christine A. Orengo, Arun Prasad Pandurangan, Typhaine Paysan-Lafosse, Sebastien Pesseat, Simon C. Potter, Matloob Qureshi, Neil D. Rawlings, Nicole Redaschi, Lorna J. Richardson, Catherine Rivoire, Gustavo A. Salazar, Amaia Sangrador-Vegas, Christian J. A. Sigrist, Ian Sillitoe, Granger G. Sutton, Narmada Thanki, Paul D. Thomas, Silvio C. E. Tosatto, Siew-Yit Yong, Robert D. Finn
InterPro in 2019: improving coverage, classification and access to protein sequence annotations. Nucleic Acids Res. 47 (Database-Issue) (2019)
Indresh Singh, Mehmet Kuscuoglu, Derek M. Harkins, Granger G. Sutton, Derrick E. Fouts, Karen E. Nelson
OMeta: an ontology-based, data-driven metadata tracking system. BMC Bioinform. 20 (1) (2019)
Thomas H. Clarke, Lauren M. Brinkac, Jason M. Inman, Granger G. Sutton, Derrick E. Fouts
PanACEA: a bioinformatics tool for the exploration and visualization of bacterial pan-chromosomes. BMC Bioinform. 19 (1) (2018)
Thomas H. Clarke, Lauren M. Brinkac, Granger G. Sutton, Derrick E. Fouts
GGRaSP: a R-package for selecting representative genomes using Gaussian mixture models. Bioinform. 34 (17) (2018)
Lauren M. Brinkac, Erin Beck, Jason M. Inman, Pratap Venepally, Derrick E. Fouts, Granger G. Sutton
LOCUST: a custom sequence locus typer for classifying microbial isolates. Bioinform. 33 (11) (2017)
Robert D. Finn, Teresa K. Attwood, Patricia C. Babbitt, Alex Bateman, Peer Bork, Alan Bridge, Hsin-Yu Chang, Zsuzsanna Dosztányi, Sara El-Gebali, Matthew Fraser, Julian Gough, David Haft, Gemma L. Holliday, Hongzhan Huang, Xiaosong Huang, Ivica Letunic, Rodrigo Lopez, Shennan Lu, Aron Marchler-Bauer, Huaiyu Mi, Jaina Mistry, Darren A. Natale, Marco Necci, Gift Nuka, Christine A. Orengo, Youngmi Park, Sebastien Pesseat, Damiano Piovesan, Simon C. Potter, Neil D. Rawlings, Nicole Redaschi, Lorna J. Richardson, Catherine Rivoire, Amaia Sangrador-Vegas, Christian J. A. Sigrist, Ian Sillitoe, Ben Smithers, Silvano Squizzato, Granger G. Sutton, Narmada Thanki, Paul D. Thomas, Silvio C. E. Tosatto, Cathy H. Wu, Ioannis Xenarios, Lai-Su L. Yeh, Siew-Yit Yong, Alex L. Mitchell
InterPro in 2017 - beyond protein family and domain annotations. Nucleic Acids Res. 45 (Database-Issue) (2017)
Pascale Gaudet, Cecilia N. Arighi, Frederic B. Bastian, Alex Bateman, Judith A. Blake, J. Michael Cherry, Peter D'Eustachio, Robert D. Finn, Michelle G. Giglio, Lynette Hirschman, Renate Kania, William Klimke, Maria Jesus Martin, Ilene Karsch-Mizrachi, Monica C. Munoz-Torres, Darren A. Natale, Claire O'Donovan, B. F. Francis Ouellette, Kim D. Pruitt, Marc Robinson-Rechavi, Susanna-Assunta Sansone, Paul N. Schofield, Granger G. Sutton, Kimberly Van Auken, Sona Vasudevan, Cathy H. Wu, Jasmine Young, Raja Mazumder
Recent advances in biocuration: Meeting Report from the fifth International Biocuration Conference. Database J. Biol. Databases Curation 2012 (2012)
Ramana Madupu, Alexander R. Richter, Robert J. Dodson, Lauren M. Brinkac, Derek M. Harkins, A. Scott Durkin, Susmita Shrivastava, Granger G. Sutton, Daniel H. Haft
CharProtDB: a database of experimentally characterized protein annotations. Nucleic Acids Res. 40 (Database-Issue) (2012)
Johannes Goll, Robert Montgomery, Lauren M. Brinkac, Seth Schobel, Derek M. Harkins, Yinong Sebastian, Susmita Shrivastava, A. Scott Durkin, Granger G. Sutton
The Protein Naming Utility: a rules database for protein nomenclature. Nucleic Acids Res. 38 (Database-Issue) (2010)
Sergey Koren, Jason R. Miller, Brian Walenz, Granger G. Sutton
An algorithm for automated closure during assembly. BMC Bioinform. 11 (2010)
Tanja Davidsen, Erin Beck, Anuradha Ganapathy, Robert Montgomery, Nikhat Zafar, Qi Yang, Ramana Madupu, Phil Goetz, Kevin Galinsky, Owen White, Granger G. Sutton
The comprehensive microbial resource. Nucleic Acids Res. 38 (Database-Issue) (2010)
Lauren M. Brinkac, Tanja Davidsen, Erin Beck, Anuradha Ganapathy, Elisabet Caler, Robert J. Dodson, A. Scott Durkin, Derek M. Harkins, Hernan Lorenzi, Ramana Madupu, Yinong Sebastian, Susmita Shrivastava, Mathangi Thiagarajan, Joshua Orvis, Jaideep P. Sundaram, Jonathan Crabtree, Kevin Galens, Yongmei Zhao, Jason M. Inman, Robert Montgomery, Seth Schobel, Kevin Galinsky, David M. Tanenbaum, Adam Resnick, Nikhat Zafar, Owen White, Granger G. Sutton
Pathema: a clade-specific bioinformatics resource center for pathogen research. Nucleic Acids Res. 38 (Database-Issue) (2010)
Jason R. Miller, Arthur L. Delcher, Sergey Koren, Eli Venter, Brian Walenz, Anushka Brownley, Justin Johnson, Kelvin Li, Clark M. Mobarry, Granger G. Sutton
Aggressive assembly of pyrosequencing reads with mates. Bioinform. 24 (24) (2008)
Robert Denroche, Ramana Madupu, Shibu Yooseph, Granger G. Sutton, Hagit Shatkay
Toward Computer-Assisted Text Curation: Classification Is Easy (Choosing Training Data Can Be Hard...). BioLINK@ISMB/ECCB (2008)
Gennady Denisov, Brian Walenz, Aaron L. Halpern, Jason R. Miller, Nelson Axelrod, Samuel Levy, Granger G. Sutton
Consensus generation and variant detection by Celera Assembler. Bioinform. 24 (8) (2008)
Shibu Yooseph, Weizhong Li, Granger G. Sutton
Gene identification and protein classification in microbial metagenomic sequence data via incremental clustering. BMC Bioinform. 9 (2008)
Aleksey V. Zimin, Douglas R. Smith, Granger G. Sutton, James A. Yorke
Assembly reconciliation. Bioinform. 24 (1) (2008)
Francisco M. de la Vega, Gabor T. Marth, Granger G. Sutton
Session Introduction. Pacific Symposium on Biocomputing (2008)
René L. Warren, Granger G. Sutton, Steven J. M. Jones, Robert A. Holt
Assembling millions of short DNA sequences using SSAKE. Bioinform. 23 (4) (2007)
Ian M. Dew, Brian Walenz, Granger G. Sutton
A Tool for Analyzing Mate Pairs in Assemblies (TAMPA). J. Comput. Biol. 12 (5) (2005)
Hagit Shatkay, Jason R. Miller, Clark M. Mobarry, Michael Flanigan, Shibu Yooseph, Granger G. Sutton
ThurGood: Evaluating Assembly-to-Assembly Mapping. J. Comput. Biol. 11 (5) (2004)
Daniel H. Huson, Knut Reinert, Saul A. Kravitz, Karin A. Remington, Arthur L. Delcher, Ian M. Dew, Michael Flanigan, Aaron L. Halpern, Zhongwu Lai, Clark M. Mobarry, Granger G. Sutton, Eugene W. Myers
Design of a compartmentalized shotgun assembler for the human genome. ISMB (Supplement of Bioinformatics) (2001)
Daniel H. Huson, Aaron L. Halpern, Zhongwu Lai, Eugene W. Myers, Knut Reinert, Granger G. Sutton
Comparing Assemblies Using Fragments and Mate-Pairs. WABI (2001)