Gary B. Fogel

Publication Activity (10 Years)

Years Active: 1995-2024
Publications (10 Years): 17

Top Topics

Computational Biology

Top Venues

IEEE Comput. Intell. Mag.

IEEE Trans. Emerg. Top. Comput. Intell.

Publications

Joseph Alexander Brown, Sheridan K. Houghten, Gary B. Fogel
2022 IEEE conference on computational intelligence in bioinformatics and computational biology (IEEE CIBCB, 2022). Biosyst. 237 (2024)
Gary B. Fogel, Piero P. Bonissone
Conference Report on the Inaugural 2023 IEEE Conference on Artificial Intelligence (IEEE CAI 2023) [Conference Reports]. IEEE Comput. Intell. Mag. 18 (4) (2023)
Marley Velasco, Gary B. Fogel
Acknowledging Volunteers Associated With 2022 IEEE CIS Conference Management [Conference Reports] [Society Briefs]. IEEE Comput. Intell. Mag. 18 (1) (2023)
Sheridan K. Houghten, Gary B. Fogel
Conference Report on 2022 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (IEEE CIBCB 2022) [Conference Report]. IEEE Comput. Intell. Mag. 18 (1) (2023)
Gary B. Fogel, Piero P. Bonissone
AI in Healthcare and Life Science [Industrial and Governmental Activities]. IEEE Comput. Intell. Mag. 18 (2) (2023)
Gonzalo A. Ruz, Daniel A. Ashlock, Richard Allmendinger, Gary B. Fogel
Editorial: 2020 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (IEEE CIBCB 2020). Biosyst. 218 (2022)
Gary B. Fogel, Enoch S. Liu, Brad Abramson, Semar Petrus, Tyler Barrus, Granger G. Sutton, Todd Michael, Sterling Thomas
Identification of Synthetic Engineering in Prokaryotic Genomes Using Evolved Neural Networks. CIBCB (2022)
Piero P. Bonissone, Gary B. Fogel
IEEE CAI 2023, an Industry-Centered Conference on AI. IEEE Comput. Intell. Mag. 17 (4) (2022)
Enoch S. Liu, Gary B. Fogel, David J. Nolan, Susanna L. Lamers, Michael S. McGrath
Using Evolved Neural Networks to Elucidate Nef Features Associated with HIV-1 Subtype Differentiation. CIBCB (2021)
Gary B. Fogel, Abir U. Igamberdiev
A word of appreciation to our publisher Anthony Newman. Biosyst. 210 (2021)
Enoch S. Liu, Gary B. Fogel, David J. Nolan, Susanna L. Lamers, Michael S. McGrath
Using Neural Networks to Identify Features Associated with HIV Nef Protein and Cancer. CIBCB (2020)
Gary B. Fogel
[Conference Calendar]. IEEE Comput. Intell. Mag. 15 (1) (2020)
Gary B. Fogel
IEEE CIS VP-Conferences Activities Vision Statement [Society Briefs]. IEEE Comput. Intell. Mag. 14 (2) (2019)
Gary B. Fogel
[Conference Calendar]. IEEE Comput. Intell. Mag. 14 (2) (2019)
Hussein A. Abbass, Gary B. Fogel, Justin Fidock
Guest Editorial: Special Issue on Human-Machine Symbiosis. IEEE Trans. Emerg. Top. Comput. Intell. 2 (4) (2018)
Hussein A. Abbass, Gary B. Fogel, Justin Fidock
Corrections to "Guest Editorial: Special Issue on Human-Machine Symbiosis". IEEE Trans. Emerg. Top. Comput. Intell. 2 (5) (2018)
Andy M. Tyrrell, Michael A. Lones, Stephen L. Smith, Gary B. Fogel
2015 Information Processing in Cells and Tissues (IPCAT 2015). Biosyst. 146 (2016)
Gary B. Fogel, Susanna L. Lamers, Enoch S. Liu, Marco Salemi, Michael S. McGrath
Identification of dual-tropic HIV-1 using evolved neural networks. Biosyst. 137 (2015)
Gary B. Fogel, Ana D. Lopez, Zoya Kai, Charles C. King
The Role of Ago2 in microRNA Biogenesis: An Investigation of miR-21. IPCAT (2015)
Daniel A. Ashlock, Sierra Gillis, Jennifer Garner, Gary B. Fogel
Evolving DNA classifiers with extinction based ring optimization. CIBCB (2015)
Daniel A. Ashlock, Sierra Gillis, Gary B. Fogel
Ring optimization with extinction. CEC (2015)
Gary B. Fogel, Tina Tallon, Augusta S. Wong, Ana D. Lopez, Charles C. King
miRNA Regulation of Human Embryonic Stem Cell Differentiation. IPCAT (2015)
Gary B. Fogel, Enoch S. Liu, Marco Salemi, Susanna L. Lamers, Michael S. McGrath
Evolved neural networks for HIV-1 co-receptor identification. IEEE Congress on Evolutionary Computation (2014)
Gonzalo A. Ruz, Eric Goles Ch., Marco Montalva, Gary B. Fogel
Dynamical and topological robustness of the mammalian cell cycle network: A reverse engineering approach. Biosyst. 115 (2014)
Susanna L. Lamers, Gary B. Fogel, David J. Nolan, Michael S. McGrath, Marco Salemi
HIV-associated neuropathogenesis: A systems biology perspective for modeling and therapy. Biosyst. 119 (2014)
Gary B. Fogel
A Report on the IEEE Life Sciences Grand Challenges Conference [Conference Report]. IEEE Comput. Intell. Mag. 8 (2) (2013)
Daniel A. Ashlock, Nikola Krsic, Gary B. Fogel
Functions for the analysis of exploration and exploitation. IEEE Congress on Evolutionary Computation (2013)
Gary B. Fogel
[Conference Calendar]. IEEE Comput. Intell. Mag. 8 (1) (2013)
Gary B. Fogel, Carla Islas, David Hecht
Modeling the evolution of drug resistance in Plasmodium falciparum DHFR. IEEE Congress on Evolutionary Computation (2013)
Gary B. Fogel
[Conference Calendar]. IEEE Comput. Intell. Mag. 8 (2) (2013)
Gary B. Fogel
[Conference Calendar]. IEEE Comput. Intell. Mag. 8 (4) (2013)
David Hecht, Gary B. Fogel
Towards predictive structure-based models of evolved drug resistance. CIBCB (2012)
Sevan G. Ficici, Enoch S. Liu, Gary B. Fogel
Evolutionary algorithms for supertree search. IEEE Congress on Evolutionary Computation (2012)
Gary B. Fogel
[Conference Calendar]. IEEE Comput. Intell. Mag. 7 (4) (2012)
Gary B. Fogel
[Conference Calendar]. IEEE Comput. Intell. Mag. 7 (2) (2012)
David Hecht, Gary B. Fogel
Modeling the evolution of drug resistance in malaria. J. Comput. Aided Mol. Des. 26 (12) (2012)
Gary B. Fogel, Alan W. Schwartz
Lynn Margulis (1938-2011). Biosyst. 107 (2) (2012)
Clare Bates Congdon, Gary B. Fogel
Special Issue on Computational Intelligence in Bioinformatics [Guest Editorial]. IEEE Comput. Intell. Mag. 7 (4) (2012)
Gary B. Fogel
[Conference Calendar]. IEEE Comput. Intell. Mag. 6 (3) (2011)
Gordon Vansant, Pat Pezzoli, Joseph Monforte, Gary B. Fogel
High-throughput toxicological classification of candidate drug compounds using gene expression, evolved neural networks, and a cell-based platform. IEEE Congress on Evolutionary Computation (2011)
Gary B. Fogel, David B. Fogel, Lawrence J. Fogel
Evolutionary programming. Scholarpedia 6 (4) (2011)
Gary B. Fogel, David B. Fogel
Simulating natural selection as a culling mechanism on finite populations with the hawk-dove game. Biosyst. 104 (1) (2011)
Gary B. Fogel
VP-Conference Activities Vision Statement [Society Briefs]. IEEE Comput. Intell. Mag. 5 (1) (2010)
Gary B. Fogel, Jonathan Tran, Stephen Johnson, David Hecht
Machine learning approaches for customized docking scores: Modeling of inhibition of Mycobacterium tuberculosis enoyl acyl carrier protein reductase. CIBCB (2010)
Susanna L. Lamers, Gary B. Fogel, Michael S. McGrath
HIV-miR-H1 evolvability during HIV pathogenesis. Biosyst. 101 (2) (2010)
Gary B. Fogel
[Conference Calendar]. IEEE Comput. Intell. Mag. 5 (4) (2010)
Ashish Anand, Ganesan Pugalenthi, Gary B. Fogel, Ponnuthurai N. Suganthan
Identification and analysis of transcription factor family-specific features derived from DNA and protein information. Pattern Recognit. Lett. 31 (14) (2010)
Gary B. Fogel
A transition to a new Editor-in-Chief. Biosyst. 95 (2) (2009)
Minh Ngoc Nguyen, Jianmin Ma, Gary B. Fogel, Jagath C. Rajapakse
Di-codon Usage for Gene Classification. PRIB (2009)
Minh Ngoc Nguyen, Jianmin Ma, Gary B. Fogel, Jagath C. Rajapakse
Di-codon usage for classification of genes. Biosyst. 98 (1) (2009)
David Hecht, Mars Cheung, Gary B. Fogel
Docking scores and QSAR using evolved neural networks for the Pan-inhibition of wild-type and mutant PfDHFR by cycloguanil derivatives. IEEE Congress on Evolutionary Computation (2009)
David Hecht, Gary B. Fogel
Approach to Drug Discovery via Computational Intelligence. J. Chem. Inf. Model. 49 (4) (2009)
Mars Cheung, Gary B. Fogel
Classification of mouse fRNA genes using evolved neural networks. CIBCB (2008)
David Hecht, Mars Cheung, Gary B. Fogel
QSAR using evolved neural networks for the inhibition of mutant PfDHFR by pyrimethamine derivatives. Biosyst. 92 (1) (2008)
Gary B. Fogel, Eric Bullinger, S. F. Su, Francisco Azuaje
Special Section on Machine Intelligence Approaches to Systems Biology. IEEE Trans. Syst. Man Cybern. Part B 38 (1) (2008)
Susanna L. Lamers, Marco Salemi, Michael S. McGrath, Gary B. Fogel
Prediction of R5, X4, and R5X4 HIV-1 Coreceptor Usage with Evolved Neural Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 5 (2) (2008)
Gary B. Fogel
Computational intelligence approaches for pattern discovery in biological systems. Briefings Bioinform. 9 (4) (2008)
Mars Cheung, Stephen Johnson, David Hecht, Gary B. Fogel
Quantitative structure-property relationships for drug solubility prediction using evolved neural networks. IEEE Congress on Evolutionary Computation (2008)
Nicole Davis, Natasha Biddlecom, David Hecht, Gary B. Fogel
On the relationship between GC content and the number of predicted microRNA binding sites by MicroInspector. Comput. Biol. Chem. 32 (3) (2008)
Ashish Anand, Gary B. Fogel, Ganesan Pugalenthi, Ponnuthurai N. Suganthan
Prediction of Transcription Factor Families Using DNA Sequence Features. PRIB (2008)
Gary B. Fogel, Mars Cheung, Eric Pittman, David Hecht
dihydrofolate reductase by pyrimethamine derivatives. J. Comput. Aided Mol. Des. 22 (1) (2008)
Jagath C. Rajapakse, Yan-Qing Zhang, Gary B. Fogel
Guest Editors' Introduction to the Special Section: Computational Intelligence Approaches in Computational Biology and Bioinformatics. IEEE ACM Trans. Comput. Biol. Bioinform. 4 (2) (2007)
David Hecht, Gary B. Fogel
High-Throughput Ligand Screening via Preclustering and Evolved Neural Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 4 (3) (2007)
David Corne, Gary B. Fogel, Jagath C. Rajapakse, Lipo Wang
Editorial for special issue on "Soft Computing for Bioinformatics and Medical Informatics". Soft Comput. 10 (4) (2006)
Connie Y. C. Ma, Susanna W. M. Wong, David Hecht, Gary B. Fogel
Evolved Neural Networks for High Throughput Anti-HIV Ligand Screening. IEEE Congress on Evolutionary Computation (2006)
Gary B. Fogel
Deciphering mechanisms of gene regulation through evolutionary computation. IEEE Comput. Intell. Mag. 1 (1) (2006)
Jianmin Ma, Minh Ngoc Nguyen, Gary B. Fogel, Jagath C. Rajapakse
Determination of the Relative Importance of Gene Function or Taxonomic Grouping to Codon Usage Bias Using Cluster Analysis and SVMs. CIBCB (2006)
Gary B. Fogel
Conference report - 2005 IEEE symposium on computational intelligence in bioinformatics and computational biology (IEEE CIBCB 2005). IEEE Comput. Intell. Mag. 1 (2) (2006)
Ashish Anand, Gary B. Fogel, E. Ke Tang, Ponnuthurai N. Suganthan
Feature Selection Approach for Quantitative Prediction of Transcriptional Activities. CIBCB (2006)
Mars Cheung, Gary B. Fogel
Identification of Functional RNA Genes Using Evolved Neural Networks. CIBCB (2005)
Gary B. Fogel, Mars Cheung
Derivation of quantitative structure-toxicity relationships for ecotoxicological effects of organic chemicals: evolving neural networks and evolving rules. Congress on Evolutionary Computation (2005)
Thiemo Krink, Bogdan Filipic, Gary B. Fogel
Noisy optimization problems - a particular challenge for differential evolution? IEEE Congress on Evolutionary Computation (2004)
Gary B. Fogel, Dana G. Weekes, Rangarajan Sampath, David J. Ecker
Parameter optimization of an evolutionary algorithm for RNA structure discovery. IEEE Congress on Evolutionary Computation (2004)
René Thomsen, Gary B. Fogel, Thiemo Krink
Improvement of clustal-derived sequence alignments with evolutionary algorithms. IEEE Congress on Evolutionary Computation (2003)
Dana Landavazo, Gary B. Fogel
Evolved neural networks for quantitative structure-activity relationships of anti-HIV compounds. IEEE Congress on Evolutionary Computation (2002)
René Thomsen, Gary B. Fogel, Thiemo Krink
A Clustal alignment improver using evolutionary algorithms. IEEE Congress on Evolutionary Computation (2002)
Gary B. Fogel, Garrison W. Greenwood, Kumar Chellapilla
Evolutionary computation with extinction: experiments and analysis. CEC (2000)
Garrison W. Greewood, Gary B. Fogel, Manuel Ciobanu
Emphasizing extinction in evolutionary programming. CEC (1999)
Gary B. Fogel, Kumar Chellapilla
Simulated sequencing by hybridization using evolutionary programming. CEC (1999)
Garrison W. Greenwood, Jae-Min Shin, Byungkook Lee, Gary B. Fogel
A survey of recent work on evolutionary approaches to the protein folding problem. CEC (1999)
Kumar Chellapilla, Gary B. Fogel
Multiple sequence alignment using evolutionary programming. CEC (1999)
Gary B. Fogel, Kumar Chellapilla, David B. Fogel
Reconstruction of DNA Sequence Information from a Simulated DNA Chip Using Evolutionary Programming. Evolutionary Programming (1998)
Gary B. Fogel
The Application of Evolutionary Computation to Selected Problems in Molecular Biology. Evolutionary Programming (1997)
David B. Fogel, Gary B. Fogel
Evolutionary Stable Strategies Are Not Always Stable under Evolutionary Dynamics. Evolutionary Programming (1995)