Sheridan K. Houghten

Publication Activity (10 Years)

Years Active: 2003-2024
Publications (10 Years): 52

Top Topics

Computational Intelligence

Genetic Programming

Top Venues

Publications

Joseph Alexander Brown, Sheridan K. Houghten, Gary B. Fogel
2022 IEEE conference on computational intelligence in bioinformatics and computational biology (IEEE CIBCB, 2022). Biosyst. 237 (2024)
Michael Dubé, Sheridan K. Houghten, Steffen P. Graether
Promoting Diversity in the Evolution of Biological Sequence Data. CEC (2024)
Michael Dubé, Kevin Olenic, Sheridan K. Houghten
What Drives Evolution of Self-Driving Automata? SSCI (2023)
James Sargant, Michael Dubé, Sheridan K. Houghten
All lockdowns are not equal: Reducing epidemic impact through evolutionary computation. Biosyst. 230 (2023)
Michael Dubé, James Sargant, Sheridan K. Houghten
Comparison of Representations to Evolve Weighted Contact Networks with Epidemic Properties. CIBCB (2023)
Emilia Rutkowski, Sheridan K. Houghten, Joseph Alexander Brown
A multi-objective genetic algorithm for compression of weighted graphs to simplify epidemic analysis. Appl. Soft Comput. 144 (2023)
Michael Dubé, James Sargant, Sheridan K. Houghten, Steffen Graether
From Bits to Bases: Evolving a Versatile Construct for Biological Sequence and Network Data. CIBCB (2023)
Omid Mohamad Beigi, Lígia Reis Nóbrega, Sheridan K. Houghten, Adriano Alves Pereira, Adriano de Oliveira Andrade
Freezing of gait in Parkinson's disease: Classification using computational intelligence. Biosyst. 232 (2023)
Sheridan K. Houghten, Gary B. Fogel
Conference Report on 2022 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (IEEE CIBCB 2022) [Conference Report]. IEEE Comput. Intell. Mag. 18 (1) (2023)
Michael Dubé, Sheridan K. Houghten
Evaluation of Frameworks for Epidemic Variants and Infectivity using an Evolutionary Algorithm. CIBCB (2022)
Michael Dubé, Sheridan K. Houghten
Now I Know My Alpha, Beta, Gammas: Variants in an Epidemic Scheme. CEC (2022)
Sheridan K. Houghten, Sharnendu Banik
Effective decoders for DNA codes. Biosyst. 211 (2022)
James Sargant, Michael Dubé, Sheridan K. Houghten
Evolving Lockdown Strategies to Minimize Infections in an Epidemic. CIBCB (2022)
James Sargant, Sheridan K. Houghten, Michael Dubé
Evolving Weighted Contact Networks for Epidemic Modeling: the Ring and the Power. CEC (2022)
Omid Mohamad Beigi, Lígia Reis Nóbrega, Sheridan K. Houghten, Adriano de Oliveira Andrade, Adriano Alves Pereira
Classification of Parkinson's Disease Patients and Effectiveness of Medication for Freezing of Gait. CIBCB (2022)
Veronica Suaste Morales, Sheridan K. Houghten
Lossy Compression of Quality Values in Sequencing Data. IEEE ACM Trans. Comput. Biol. Bioinform. 18 (5) (2021)
Guangyao Chen, James Sargant, Sheridan K. Houghten, Tyler Kennedy Collins
Identification of Genes Associated with Alzheimer's Disease using Evolutionary Computation. CIBCB (2021)
Emilia Rutkowski, James Sargant, Sheridan K. Houghten, Joseph Alexander Brown
Evaluation of Communities from Exploratory Evolutionary Compression of Weighted Graphs. CEC (2021)
Daniel A. Ashlock, Joseph Alexander Brown, Sheridan K. Houghten, Munir Makhmutov
One Moose, Two Moose, Three Fields, More? CIBCB (2021)
Sumaiya Amin, Sheridan K. Houghten, James Alexander Hughes
Vaccinating a Population is a Changing Programming Problem. CIBCB (2021)
Rodrigo Vega Jimenez, Michael Dubé, Sheridan K. Houghten, James Alexander Hughes
Weighting on the World to Change... an Epidemic. CEC (2021)
Joseph Alexander Brown, Daniel A. Ashlock, Sheridan K. Houghten, Angelo Romualdo
Evolutionary Graph Compression and Diffusion Methods for City Discovery in Role Playing Games. CEC (2020)
Emilia Rutkowski, Sheridan K. Houghten, Joseph Alexander Brown
Extracting Information from Weighted Contact Networks via Genetic Algorithms. CIBCB (2020)
Sharnendu Banik, Sheridan K. Houghten
Effective Side Effect Machines for Decoding. CIBCB (2020)
Michael Dubé, Sheridan K. Houghten, Daniel A. Ashlock
Modelling of Vaccination Strategies for Epidemics using Evolutionary Computation. CEC (2020)
Michael Dubé, Sheridan K. Houghten, Daniel A. Ashlock, James Alexander Hughes
Evolving the Curve. CIBCB (2020)
Tyler Kennedy Collins, Sheridan K. Houghten
A centrality based multi-objective approach to disease gene association. Biosyst. (2020)
Emilia Rutkowski, Sheridan K. Houghten
Cryptanalysis of RSA: Integer Prime Factorization Using Genetic Algorithms. CEC (2020)
James Alexander Hughes, Sheridan K. Houghten, Joseph Alexander Brown
Gait Model Analysis of Parkinson's Disease Patients under Cognitive Load. CEC (2020)
James Alexander Hughes, William Hannah, Peter Kikkert, Barry MacKenzie, Wendy Ashlock, Sheridan K. Houghten, Daniel A. Ashlock, Matthew Stoodley, Michael Dubé, Rachel Brown, Amanda Saunders
We Are Not Pontius Pilate: Acknowledging Ethics and Policy. SSCI (2020)
James Alexander Hughes, Sheridan K. Houghten, Joseph Alexander Brown
Models of Parkinson's Disease Patient Gait. IEEE J. Biomed. Health Informatics 24 (11) (2020)
James Alexander Hughes, Michael Dubé, Sheridan K. Houghten, Daniel A. Ashlock
Vaccinating a Population is a Programming Problem. CIBCB (2020)
James Alexander Hughes, Ryan E. R. Reid, Sheridan K. Houghten, Ross E. Andersen
Using Genetic Programming to Investigate a Novel Model of Resting Energy Expenditure for Bariatric Surgery Patients. CIBCB (2020)
Sheridan K. Houghten, Angelo Romualdo, Tyler Kennedy Collins, Joseph Alexander Brown
Compression of Biological Networks using a Genetic Algorithm with Localized Merge. CIBCB (2019)
Michael Dubé, Sheridan K. Houghten, Daniel A. Ashlock
Representation for Evolution of Epidemic Models. CEC (2019)
James Alexander Hughes, Sheridan K. Houghten, Joseph Alexander Brown
Descriptive Symbolic Models of Gaits from Parkinson's Disease Patients. CIBCB (2019)
Arvand Fazeli, Sheridan K. Houghten
Deep Learning for the Prediction of Stock Market Trends. IEEE BigData (2019)
Michael Dubé, Sheridan K. Houghten, Daniel A. Ashlock
Pandemic: A Graph Evolution Story. CIBCB (2019)
Michael Dubé, Sheridan K. Houghten, Daniel A. Ashlock
Parameter selection for modeling of epidemic networks. CIBCB (2018)
Sheridan K. Houghten, Tyler Kennedy Collins, James Alexander Hughes, Joseph Alexander Brown
Edit metric decoding: Return of the side effect machines. CIBCB (2018)
Amanda Saunders, Daniel A. Ashlock, Sheridan K. Houghten
Hierarchical clustering and tree stability. CIBCB (2018)
Yosra Kazemi, Sheridan K. Houghten
A deep learning pipeline to classify different stages of Alzheimer's disease from fMRI data. CIBCB (2018)
Paul E. Becker, Martin Derka, Sheridan K. Houghten, Jennifer Ulrich
Build a Sporadic Group in Your Basement. Am. Math. Mon. 124 (4) (2017)
John Orth, Sheridan K. Houghten, Lindsey Tulloch
Evaluation of the salmon algorithm. CIBCB (2017)
Tim Ribaric, Sheridan K. Houghten
Genetic programming for improved cryptanalysis of elliptic curve cryptosystems. CEC (2017)
Tyler Kennedy Collins, Adel Zakirov, Joseph Alexander Brown, Sheridan K. Houghten
Single-objective and multi-objective genetic algorithms for compression of biological networks. CIBCB (2017)
Daniel A. Ashlock, Sheridan K. Houghten
Hybridization and ring optimization for larger sets of embeddable biomarkers. CIBCB (2017)
James Alexander Hughes, Sheridan K. Houghten, Daniel A. Ashlock
Restarting and recentering genetic algorithm variations for DNA fragment assembly: The necessity of a multi-strategy approach. Biosyst. 150 (2016)
Joseph Alexander Brown, Sheridan K. Houghten, Tyler Kennedy Collins, Qiang Qu
Evolving graph compression using similarity measures for bioinformatics applications. CIBCB (2016)
Ashkan Entezari Heravi, Sheridan K. Houghten
A methodology for disease gene association using centrality measures. CEC (2016)
Ashkan Entezari Heravi, Koosha Tahmasebipour, Sheridan K. Houghten
Evolutionary computation for disease gene association. CIBCB (2015)
Daniel A. Ashlock, Sheridan K. Houghten
Lexicode crossover for embeddable biomarkers. CIBCB (2015)
Koosha Tahmasebipour, Sheridan K. Houghten
Disease-Gene Association Using a Genetic Algorithm. BIBE (2014)
James Alexander Hughes, Sheridan K. Houghten, Daniel A. Ashlock
Recentering and restarting a genetic algorithm using a generative representation for an ordered gene problem. Int. J. Hybrid Intell. Syst. 11 (4) (2014)
Collin Price, Sheridan K. Houghten, Sergei Vassiliev, Doug Bruce
Modeling metal protein complexes from experimental extended X-ray absorption fine structure using evolutionary algorithms. CIBCB (2014)
Mohammad Goodarzi, Sheridan K. Houghten, Ping Liang
Effect of Multi-K Contig Merging in de novo DNA Assembly. BIBE (2014)
James Alexander Hughes, Sheridan K. Houghten, Guillermo M. Mallén-Fullerton, Daniel A. Ashlock
Recentering and Restarting Genetic Algorithm variations for DNA Fragment Assembly. CIBCB (2014)
Guillermo M. Mallén-Fullerton, James Alexander Hughes, Sheridan K. Houghten, Guillermo Fernández-Anaya
Benchmark datasets for the DNA fragment assembly problem. Int. J. Bio Inspired Comput. 5 (6) (2013)
James Alexander Hughes, Sheridan K. Houghten, Daniel A. Ashlock
Recentering, reanchoring & restarting an evolutionary algorithm. NaBIC (2013)
James Alexander Hughes, Joseph A. Brown, Sheridan K. Houghten, Daniel A. Ashlock
Edit metric decoding: Representation strikes back. IEEE Congress on Evolutionary Computation (2013)
Farhad Alizadeh Noori, Sheridan K. Houghten
A multi-objective genetic algorithm with side effect machines for motif discovery. CIBCB (2012)
Zhiyuan Li, Sheridan K. Houghten
Searching for Optimal Deletion Correcting Codes: New Properties and Extensions of Tenengolts Codes. CIT (2012)
Daniel A. Ashlock, Sheridan K. Houghten, Joseph Alexander Brown, John Orth
On the synthesis of DNA error correcting codes. Biosyst. 110 (1) (2012)
Daniel E. McCarney, Sheridan K. Houghten, Brian J. Ross
Evolutionary approaches to the generation of optimal error correcting codes. GECCO (2012)
Pascal Comte, Sergei Vassiliev, Sheridan K. Houghten, Doug Bruce
Genetic algorithm with alternating selection pressure for protein side-chain packing and pK(a) prediction. Biosyst. 105 (3) (2011)
Joseph A. Brown, Daniel A. Ashlock, John Orth, Sheridan K. Houghten
Autogeneration of fractal photographic mosaic images. IEEE Congress on Evolutionary Computation (2011)
John Orth, Sheridan K. Houghten
Optimizing the Salmon Algorithm for the construction of DNA error-correcting codes. CIBCB (2011)
Daniel A. Ashlock, Sheridan K. Houghten
Ring optimization of edit metric codes in DNA. BCB (2010)
Joseph A. Brown, Sheridan K. Houghten, Daniel A. Ashlock
Side effect machines for quaternary edit metric decoding. CIBCB (2010)
Daniel A. Ashlock, Sheridan K. Houghten
DNA error correcting codes: No crossover. CIBCB (2009)
Joseph A. Brown, Sheridan K. Houghten, Beatrice M. Ombuki-Berman
Genetic algorithm cryptanalysis of a substitution permutation network. CICS (2009)
Joseph A. Brown, Sheridan K. Houghten, Daniel A. Ashlock
Edit metric decoding: a new hope. C3S2E (2009)
Daniel A. Ashlock, Sheridan K. Houghten
A Novel Variation Operator for More Rapid Evolution of DNA Error Correcting Codes. CIBCB (2005)
Sheridan K. Houghten, Clement W. H. Lam, Larry H. Thiel, J. A. Parker
The extended quadratic residue code is the only (48, 24, 12) self-dual doubly-even code. IEEE Trans. Inf. Theory 49 (1) (2003)