Ekaterina A. Sakharova

Publication Activity (10 Years)

Years Active: 2019-2023
Publications (10 Years): 4

Top Topics

Profile Hidden Markov Models

Top Venues

Nucleic Acids Res.

PLoS Comput. Biol.

Publications

Lorna J. Richardson, Ben Allen, Germana Baldi, Martin Beracochea, Maxwell L. Bileschi, Tony Burdett, Josephine Burgin, Juan Caballero, Guy Cochrane, Lucy J. Colwell, Tom Curtis, Alejandra Escobar-Zepeda, Tatiana A. Gurbich, Varsha Kale, Anton I. Korobeynikov, Shriya Raj, Alexander b Rogers, Ekaterina A. Sakharova, Santiago Sanchez, Darren J. Wilkinson, Robert D. Finn
MGnify: the microbiome sequence data analysis resource in 2023. Nucleic Acids Res. 51 (D1) (2023)
Guillermo Rangel-Pineros, Alexandre Almeida, Martin Beracochea, Ekaterina A. Sakharova, Manja Marz, Alejandro Reyes, Martin Hölzer, Robert D. Finn
VIRify: An integrated detection, annotation and taxonomic classification pipeline using virus-specific protein profile hidden Markov models. PLoS Comput. Biol. 19 (8) (2023)
Alex L. Mitchell, Alexandre Almeida, Martin Beracochea, Miguel A. Boland, Josephine Burgin, Guy Cochrane, Michael R. Crusoe, Varsha Kale, Simon C. Potter, Lorna J. Richardson, Ekaterina A. Sakharova, Maxim Scheremetjew, Anton I. Korobeynikov, Alexander Shlemov, Olga Kunyavskaya, Alla L. Lapidus, Robert D. Finn
MGnify: the microbiome analysis resource in 2020. Nucleic Acids Res. 48 (Database-Issue) (2020)
Artyom A. Egorov, Ekaterina A. Sakharova, Aleksandra S. Anisimova, Sergey E. Dmitriev, Vadim N. Gladyshev, Ivan V. Kulakovskiy
svist4get: a simple visualization tool for genomic tracks from sequencing experiments. BMC Bioinform. 20 (1) (2019)